Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0771.Seq
         (399 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q604J2 Cluster: Glycosyl transferase, group 1 family pr...    32   3.6  
UniRef50_Q8I363 Cluster: Putative uncharacterized protein PFI043...    32   3.6  
UniRef50_A2F9Z6 Cluster: Putative uncharacterized protein; n=1; ...    32   3.6  
UniRef50_A6UNF2 Cluster: Putative uncharacterized protein; n=1; ...    31   6.3  
UniRef50_UPI00006CB2F2 Cluster: Leucine Rich Repeat family prote...    31   8.3  
UniRef50_Q1YST5 Cluster: Oxidoreductase, FAD-binding; n=2; cellu...    31   8.3  

>UniRef50_Q604J2 Cluster: Glycosyl transferase, group 1 family
           protein; n=1; Methylococcus capsulatus|Rep: Glycosyl
           transferase, group 1 family protein - Methylococcus
           capsulatus
          Length = 396

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = -1

Query: 381 VPLAVVMLHSLTIIFTDNRSRXTLLDXXNXHICINTVSSLIASVYGAQMYDSILD 217
           +PLA  +L SLT  FT    + TLL+    H C+     +I   YG  +++ ++D
Sbjct: 119 IPLAGTILGSLTGYFTRVGRKPTLLERWVIHCCLTLPDRVIVPSYG--VFEDLVD 171


>UniRef50_Q8I363 Cluster: Putative uncharacterized protein PFI0430c;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           PFI0430c - Plasmodium falciparum (isolate 3D7)
          Length = 995

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = +1

Query: 40  WXXVXKCNQTXXX*NNXNYKRTS-QLM*LIYHPQVEVYQYTTYDNTSDFYKNXYY 201
           W    KC       N  NYK+ S     +IYH  +E  +  TYDN   +  N  Y
Sbjct: 794 WKNHKKCASNKCRENILNYKKYSTNCENIIYHENIECNKNVTYDNNIMYDNNIMY 848


>UniRef50_A2F9Z6 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 479

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +2

Query: 203 FLTKRSKMLSYICAPYTEAMRDETVFMHMXXFXKSSKVILDLLSVNMMVNECNITTAR-G 379
           FL   S++L  +CA YT    D+ + M       +  +++  LS+    NE    TAR  
Sbjct: 384 FLQSSSRLLEDVCARYTRVYDDQEISMMQPPKIHNQSILIPKLSLQR--NESVSQTARPQ 441

Query: 380 TTMSL 394
           TTMS+
Sbjct: 442 TTMSM 446


>UniRef50_A6UNF2 Cluster: Putative uncharacterized protein; n=1;
           Methanococcus vannielii SB|Rep: Putative uncharacterized
           protein - Methanococcus vannielii SB
          Length = 635

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 148 YQYTTYDNTSDFYKNXYYLPYQKV*NAIIHLCPVH*SNER*NCVYAY 288
           Y+YT Y   +    N Y   Y  V NA+    P H ++ +  CV+ Y
Sbjct: 47  YKYTNYKTLNSEEYNEYVYFYDNVRNAMFSEMPEHSNDSKKQCVFNY 93


>UniRef50_UPI00006CB2F2 Cluster: Leucine Rich Repeat family protein;
           n=1; Tetrahymena thermophila SB210|Rep: Leucine Rich
           Repeat family protein - Tetrahymena thermophila SB210
          Length = 1577

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 82  NNXNYKRTSQLM*LIYHPQVEVYQYTTYDNTSDFYKNXYYLPYQ 213
           NN  Y+  +       +PQ+++     ++N S  Y N YY PYQ
Sbjct: 804 NNQEYQENNNKKIEHSNPQLQILNQFKHNNNSIAYFNSYYSPYQ 847


>UniRef50_Q1YST5 Cluster: Oxidoreductase, FAD-binding; n=2; cellular
           organisms|Rep: Oxidoreductase, FAD-binding - gamma
           proteobacterium HTCC2207
          Length = 428

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 19/61 (31%), Positives = 32/61 (52%)
 Frame = -1

Query: 381 VPLAVVMLHSLTIIFTDNRSRXTLLDXXNXHICINTVSSLIASVYGAQMYDSILDLLVRK 202
           +PL    +HSL   +++ +    LLD  N  + I T S++IAS +  + +     L +RK
Sbjct: 181 IPLVQADIHSLE--YSEQQQSWQLLDA-NKQLVIETESAIIASAFDCKKFSQTAYLPLRK 237

Query: 201 I 199
           I
Sbjct: 238 I 238


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 290,857,618
Number of Sequences: 1657284
Number of extensions: 4295233
Number of successful extensions: 8706
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8706
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)