Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0771.Seq
         (399 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   4.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   5.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   5.9  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   5.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   5.9  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +1

Query: 136 QVEVYQYTTYDNTSDFYK 189
           ++E ++ T YD  ++FY+
Sbjct: 5   EMEKFEITDYDLNNEFYR 22


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 169 NTSDFYKNXYYLP 207
           N S+  +N YYLP
Sbjct: 57  NVSEISENFYYLP 69


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 158 QHMTTLAIFIKMXIIFLTKRSKM 226
           Q +    IFI + I+F  KRS +
Sbjct: 41  QTVAYFVIFIILTIVFFEKRSAL 63


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +2

Query: 353 ECNITTARGTTMSL 394
           ECN TTA G T  L
Sbjct: 179 ECNNTTAEGFTYFL 192


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +2

Query: 353 ECNITTARGTTMSL 394
           ECN TTA G T  L
Sbjct: 179 ECNNTTAEGFTYFL 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,680
Number of Sequences: 336
Number of extensions: 1278
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)