Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0771.Seq
         (399 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064690-1|AAH64690.1|  530|Homo sapiens ZNF529 protein protein.       29   4.3  
AK025110-1|BAB15068.1|  458|Homo sapiens protein ( Homo sapiens ...    29   4.3  
AB046835-1|BAB13441.1|  484|Homo sapiens KIAA1615 protein protein.     29   4.3  

>BC064690-1|AAH64690.1|  530|Homo sapiens ZNF529 protein protein.
          Length = 530

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +1

Query: 106 SQLM*LIYHPQVEVYQYTTYDNTSDFYKNXYYLPYQKV*NAIIHLC 243
           S ++ L  H  V+  +Y  Y NT  FYK+  +  YQK+ N   + C
Sbjct: 180 SSMLQLNIHTGVKPCKYMEYGNTCSFYKD--FNVYQKIHNEKFYKC 223


>AK025110-1|BAB15068.1|  458|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21457 fis, clone COL04705. ).
          Length = 458

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +1

Query: 106 SQLM*LIYHPQVEVYQYTTYDNTSDFYKNXYYLPYQKV*NAIIHLC 243
           S ++ L  H  V+  +Y  Y NT  FYK+  +  YQK+ N   + C
Sbjct: 108 SSMLQLNIHTGVKPCKYMEYGNTCSFYKD--FNVYQKIHNEKFYKC 151


>AB046835-1|BAB13441.1|  484|Homo sapiens KIAA1615 protein protein.
          Length = 484

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +1

Query: 106 SQLM*LIYHPQVEVYQYTTYDNTSDFYKNXYYLPYQKV*NAIIHLC 243
           S ++ L  H  V+  +Y  Y NT  FYK+  +  YQK+ N   + C
Sbjct: 134 SSMLQLNIHTGVKPCKYMEYGNTCSFYKD--FNVYQKIHNEKFYKC 177


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,510,690
Number of Sequences: 237096
Number of extensions: 653246
Number of successful extensions: 824
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)