Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0764.Seq
         (648 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL136123-2|CAH71578.1|  196|Homo sapiens chromosome 13 open read...    30   6.2  
AF334405-1|AAK38371.1|  196|Homo sapiens CLLL6 protein protein.        30   6.2  
AF055016-1|AAC09363.1|  217|Homo sapiens unknown protein.              30   6.2  
BC101823-1|AAI01824.1|  473|Homo sapiens bestrophin 4 protein.         30   8.2  
AY515707-1|AAR99657.1|  473|Homo sapiens bestrophin 4 protein.         30   8.2  
AL592166-10|CAI13005.1|  473|Homo sapiens vitelliform macular dy...    30   8.2  
AF440757-1|AAM76996.1|  473|Homo sapiens vitelliform macular dys...    30   8.2  

>AL136123-2|CAH71578.1|  196|Homo sapiens chromosome 13 open reading
           frame 1 protein.
          Length = 196

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 266 RDEVKKHVNLKELKAIILVTAHWEEDVVTISSGK 367
           RD    H+ LKE+ A+ L T H   DVV + +G+
Sbjct: 13  RDGGTGHIPLKEMPAVQLDTQHMGTDVVIVKNGR 46


>AF334405-1|AAK38371.1|  196|Homo sapiens CLLL6 protein protein.
          Length = 196

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 266 RDEVKKHVNLKELKAIILVTAHWEEDVVTISSGK 367
           RD    H+ LKE+ A+ L T H   DVV + +G+
Sbjct: 13  RDGGTGHIPLKEMPAVQLDTQHMGTDVVIVKNGR 46


>AF055016-1|AAC09363.1|  217|Homo sapiens unknown protein.
          Length = 217

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 266 RDEVKKHVNLKELKAIILVTAHWEEDVVTISSGK 367
           RD    H+ LKE+ A+ L T H   DVV + +G+
Sbjct: 34  RDGGTGHIPLKEMPAVQLDTQHMGTDVVIVKNGR 67


>BC101823-1|AAI01824.1|  473|Homo sapiens bestrophin 4 protein.
          Length = 473

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 402 PPESYXYRYDAPGNPELANRIHEKLKNSGIDSKLDP 509
           PP    +R +  G+PE A RI E+   SG D  L+P
Sbjct: 439 PPHLLRFRAEEGGDPEAAARIEEESAESG-DEALEP 473


>AY515707-1|AAR99657.1|  473|Homo sapiens bestrophin 4 protein.
          Length = 473

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 402 PPESYXYRYDAPGNPELANRIHEKLKNSGIDSKLDP 509
           PP    +R +  G+PE A RI E+   SG D  L+P
Sbjct: 439 PPHLLRFRAEEGGDPEAAARIEEESAESG-DEALEP 473


>AL592166-10|CAI13005.1|  473|Homo sapiens vitelliform macular
           dystrophy 2-like 2 protein.
          Length = 473

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 402 PPESYXYRYDAPGNPELANRIHEKLKNSGIDSKLDP 509
           PP    +R +  G+PE A RI E+   SG D  L+P
Sbjct: 439 PPHLLRFRAEEGGDPEAAARIEEESAESG-DEALEP 473


>AF440757-1|AAM76996.1|  473|Homo sapiens vitelliform macular
           dystrophy 2-like protein 2 protein.
          Length = 473

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 402 PPESYXYRYDAPGNPELANRIHEKLKNSGIDSKLDP 509
           PP    +R +  G+PE A RI E+   SG D  L+P
Sbjct: 439 PPHLLRFRAEEGGDPEAAARIEEESAESG-DEALEP 473


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,133,459
Number of Sequences: 237096
Number of extensions: 1571106
Number of successful extensions: 2883
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2883
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)