Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0764.Seq
         (648 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023949-1|ABB36453.1| 1312|Drosophila melanogaster IP03879p pro...    29   5.4  
AF287292-1|AAG00999.1|  729|Drosophila melanogaster Disco-relate...    29   5.4  
AE014298-2334|AAF48566.2| 1311|Drosophila melanogaster CG32577-P...    29   5.4  

>BT023949-1|ABB36453.1| 1312|Drosophila melanogaster IP03879p protein.
          Length = 1312

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +3

Query: 183  APALFVNHGGGPLPLL 230
            +P LF+NHGGG  PLL
Sbjct: 1195 SPRLFLNHGGGASPLL 1210


>AF287292-1|AAG00999.1|  729|Drosophila melanogaster Disco-related
           protein protein.
          Length = 729

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +3

Query: 183 APALFVNHGGGPLPLL 230
           +P LF+NHGGG  PLL
Sbjct: 612 SPRLFLNHGGGASPLL 627


>AE014298-2334|AAF48566.2| 1311|Drosophila melanogaster CG32577-PA
            protein.
          Length = 1311

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +3

Query: 183  APALFVNHGGGPLPLL 230
            +P LF+NHGGG  PLL
Sbjct: 1194 SPRLFLNHGGGASPLL 1209


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,942,748
Number of Sequences: 53049
Number of extensions: 496425
Number of successful extensions: 1694
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1694
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)