Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0763.Seq
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical pr... 80 1e-15
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 33 0.15
AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical ... 32 0.27
AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical ... 32 0.36
Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical pr... 31 0.47
AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical... 30 1.1
Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical p... 29 2.5
U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81453-4|CAB03794.1| 283|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC025724-9|AAG23382.1| 77|Caenorhabditis elegans Hypothetical ... 29 3.3
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 4.4
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 28 5.8
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 28 5.8
AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical ... 28 5.8
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 28 5.8
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 27 7.7
U88167-1|AAB42226.1| 319|Caenorhabditis elegans Hypothetical pr... 27 7.7
>Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical
protein T05H10.6b protein.
Length = 414
Score = 80.2 bits (189), Expect = 1e-15
Identities = 38/69 (55%), Positives = 52/69 (75%)
Frame = -2
Query: 483 RTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGI 304
RTR+E+QEVR+TRDPIT FK++I+ L T ++LK ID +VRKEVDEA K + ++ +
Sbjct: 313 RTREEIQEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKEVDEALKIATSDGVLPP 372
Query: 303 EELSADIYY 277
E L ADIY+
Sbjct: 373 EALYADIYH 381
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -3
Query: 596 KAARXAIEYCNAGKGPLVMEMETVPLLWSSMSDPGMS 486
+A + A EYC++GKGPL+MEM T SMSDPG S
Sbjct: 275 EATKWAKEYCDSGKGPLMMEMATYRYHGHSMSDPGTS 311
>Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical
protein T05H10.6a protein.
Length = 397
Score = 80.2 bits (189), Expect = 1e-15
Identities = 38/69 (55%), Positives = 52/69 (75%)
Frame = -2
Query: 483 RTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGI 304
RTR+E+QEVR+TRDPIT FK++I+ L T ++LK ID +VRKEVDEA K + ++ +
Sbjct: 296 RTREEIQEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKEVDEALKIATSDGVLPP 355
Query: 303 EELSADIYY 277
E L ADIY+
Sbjct: 356 EALYADIYH 364
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -3
Query: 596 KAARXAIEYCNAGKGPLVMEMETVPLLWSSMSDPGMS 486
+A + A EYC++GKGPL+MEM T SMSDPG S
Sbjct: 258 EATKWAKEYCDSGKGPLMMEMATYRYHGHSMSDPGTS 294
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 33.1 bits (72), Expect = 0.15
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = -2
Query: 522 VTLVIDVGPWYVDRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKV-RKEVD 346
+ +V+ G W+ + ++EV T D +++N ++L++ +V K+V+
Sbjct: 242 IAIVLRKGNWF-----EVIREVNGTSD-----LNEVVNALYEGFEELQEEKLRVLSKQVE 291
Query: 345 EATKQSKTEPEVGIEELSADIYYKNLE 265
TKQ+K E E + + ++YYKNL+
Sbjct: 292 RKTKQAKVEEERKLIDQQNEVYYKNLK 318
>AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical
protein F28H6.6 protein.
Length = 740
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -2
Query: 459 VRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIY 280
+RQTR+ + + +L + K A ++KE + TK +K E I EL +
Sbjct: 361 IRQTRETLDIELQIMLKDSINPKSHAKTFAALLKKERETRTKHAKVFMEAKINELDMGNF 420
Query: 279 YKNLEPF 259
Y+ + F
Sbjct: 421 YETYDSF 427
>AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical
protein T22B11.5 protein.
Length = 1029
Score = 31.9 bits (69), Expect = 0.36
Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = -2
Query: 465 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEE-LSA 289
Q ++QT+ + ++EKILN + +K+ K +++A + ++ V + L +
Sbjct: 532 QRIKQTKTALEKYQEKILNEGVANEQYVKEELTKYGSILEDAYENAQKVTYVRNRDWLDS 591
Query: 288 --DIYYKNLEPFVLASTRLPRSN 226
D ++K +P L ST + + N
Sbjct: 592 PWDDFFKKRDPLKLPSTGIEQEN 614
>Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical
protein K02B12.8 protein.
Length = 387
Score = 31.5 bits (68), Expect = 0.47
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -1
Query: 493 VCRSDEGRGTGGEADQGPHHFVQGEDLESRARHARSAQGYRRQGT*RSRR 344
+ + D TGG + HHF Q + A++ RSA G+ RQ RR
Sbjct: 314 ISKRDSSLPTGGGSAIRVHHFKQNSRITPIAQNRRSAAGFDRQQIQEMRR 363
>AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical
protein Y53F4B.21 protein.
Length = 1099
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = -2
Query: 453 QTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYY- 277
Q+ +T KE I+N +V D+D +++ A KTE + +E Y
Sbjct: 623 QSMQILTKLKETIMNTLIVKMGAQIDLDLRIQANTHLAV--GKTEQDGAPDEEMEYFGYL 680
Query: 276 -KNLEPFVLASTRLPRSNTLRS 214
K ++ F +A+T +P + +LRS
Sbjct: 681 IKTVQKFQVATTVVPIAESLRS 702
>Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical
protein C18E9.2a protein.
Length = 364
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -2
Query: 498 PWYV-DRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKT 322
PWY + DE +E ++ + S KEK + E D + + +E D+A K S+
Sbjct: 272 PWYTYEYVGDEKKEAKKDKKDKKSKKEKDSDAEEEEQDHIAAEQEQKEEEDDDAEKNSQA 331
Query: 321 EPEVGIEEL 295
+ E++
Sbjct: 332 STDDNYEKI 340
>U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical
protein F42C5.3 protein.
Length = 250
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = -2
Query: 444 DPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYKNLE 265
D + S K+ + + + ++ K +KE+DE K++K E E + E + +++ KNL+
Sbjct: 10 DRLRSQAAKVQSEKETFDRKRRETLEKHKKELDELEKKNKKE-EDDLREQNMNLWNKNLD 68
Query: 264 PFVLASTRLPRSNTLRSN 211
+ L T SN
Sbjct: 69 QQIALGNELNNKYTEISN 86
>Z81453-4|CAB03794.1| 283|Caenorhabditis elegans Hypothetical
protein B0250.6 protein.
Length = 283
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 135 NTFVIFFNCGIYMAIPLVEIIYFCNGNTICYLR 37
N +++F CG + PL + YFC N+ CY R
Sbjct: 139 NQYMLFGYCGNVLETPLECVNYFCAVNS-CYYR 170
>AC025724-9|AAG23382.1| 77|Caenorhabditis elegans Hypothetical
protein Y67D8C.1 protein.
Length = 77
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -2
Query: 417 ILNHELVTP--DQLKDIDAKVRKEVDEATKQSKTEPE 313
I N + TP DQ+KDID+K +K + T + K EP+
Sbjct: 8 IENTHVTTPIIDQIKDIDSKNKKNIQ--TVREKNEPK 42
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = -2
Query: 513 VIDVGPWYVDRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATK 334
V +VGP RT + ++ P F L H+ PDQL ++ + +++E
Sbjct: 1027 VTEVGP-PAPRTTEAAPPAPSSQPP-RQFAVNTLQHQQTKPDQLPNLPRNLAAQIEEKCL 1084
Query: 333 QSKTEPEVGIEELSADIYYKNLE 265
Q EP G + AD +Y N++
Sbjct: 1085 Q-PVEP--GPCKNFADRWYFNVD 1104
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 465 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSAD 286
+ +R++ +KEK+ + L L IDA RK + E SK EEL
Sbjct: 575 ESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS-RKRIAELELSSKESENRSSEELEEQ 633
Query: 285 -IYYKNL 268
+YY ++
Sbjct: 634 RLYYVSM 640
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 465 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSAD 286
+ +R++ +KEK+ + L L IDA RK + E SK EEL
Sbjct: 575 ESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS-RKRIAELELSSKESENRSSEELEEQ 633
Query: 285 -IYYKNL 268
+YY ++
Sbjct: 634 RLYYVSM 640
>AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical
protein W03F8.10 protein.
Length = 587
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/52 (25%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Frame = -2
Query: 489 VDRTRDEVQEV----RQTRDPITSFKEKILNHEL-VTPDQLKDIDAKVRKEV 349
+D+ +E+ E + + + I + E++L E+ +TPDQ+ D+ K+++ +
Sbjct: 304 LDKIAEEIGEFLTAQKSSPEQIRNLAEEVLGKEISLTPDQITDLTGKIKESL 355
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 465 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSAD 286
+ +R++ +KEK+ + L L IDA RK + E SK EEL
Sbjct: 573 ESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS-RKRIAELELSSKESENRSSEELEEQ 631
Query: 285 -IYYKNL 268
+YY ++
Sbjct: 632 RLYYVSM 638
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -2
Query: 426 KEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYKNLEP 262
KE+ E+ ++ + D + +KE ++ ++ K E EV EE S + K LEP
Sbjct: 323 KEEEQKEEVEKKEEEEKKDEEPKKEEEKKEEEEKKEDEV--EEKSEKVEEKELEP 375
>U88167-1|AAB42226.1| 319|Caenorhabditis elegans Hypothetical
protein D2092.6 protein.
Length = 319
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/92 (16%), Positives = 41/92 (44%)
Frame = -2
Query: 483 RTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGI 304
+ R+E+ E + +DPI ++ L E + ++ + +++ K+ E E +
Sbjct: 228 KNREELPEYVEPKDPIMKELQEFLKIEPKSSEENSNSQNSTLTSIEKERKEESEEKEKAV 287
Query: 303 EELSADIYYKNLEPFVLASTRLPRSNTLRSNL 208
+ + + + + +S+ S+T +N+
Sbjct: 288 QADEHRLIVRGWQELLKSSSSSSSSSTTSTNV 319
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,170,023
Number of Sequences: 27780
Number of extensions: 275698
Number of successful extensions: 1109
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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