Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0762.Seq
(558 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 159 3e-40
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 159 3e-40
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 159 3e-40
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 95 8e-21
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 91 8e-20
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 71 2e-13
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.005
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.005
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 35 0.009
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 35 0.009
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 34 0.016
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 33 0.022
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 31 0.11
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.15
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 30 0.20
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.35
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 2.5
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 3.3
SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosa... 26 3.3
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 26 4.3
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 4.3
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 5.7
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 7.5
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 25 10.0
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 25 10.0
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 25 10.0
SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 10.0
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 159 bits (386), Expect = 3e-40
Identities = 74/85 (87%), Positives = 79/85 (92%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+GQ
Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQ 132
Query: 436 TRXHALLAFTLGVKQLIVGVNKMDS 510
TR HALLA+TLGVKQLIV VNKMD+
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDT 157
Score = 143 bits (346), Expect = 2e-35
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 221 DKLKAERER 247
DKLKAERER
Sbjct: 61 DKLKAERER 69
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 159 bits (385), Expect = 3e-40
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQ
Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQ 132
Query: 436 TRXHALLAFTLGVKQLIVGVNKMDS 510
TR HALLA+TLGVKQLIV VNKMD+
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDT 157
Score = 143 bits (346), Expect = 2e-35
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 221 DKLKAERER 247
DKLKAERER
Sbjct: 61 DKLKAERER 69
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 159 bits (385), Expect = 3e-40
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQ
Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQ 132
Query: 436 TRXHALLAFTLGVKQLIVGVNKMDS 510
TR HALLA+TLGVKQLIV VNKMD+
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDT 157
Score = 143 bits (346), Expect = 2e-35
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 221 DKLKAERER 247
DKLKAERER
Sbjct: 61 DKLKAERER 69
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 94.7 bits (225), Expect = 8e-21
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + GQ
Sbjct: 304 VEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQ 363
Query: 436 TRXHALLAFTLGVKQLIVGVNKMD 507
TR HA+LA T G+ L+V +NKMD
Sbjct: 364 TREHAVLARTQGINHLVVVINKMD 387
Score = 81.4 bits (192), Expect = 8e-17
Identities = 35/65 (53%), Positives = 48/65 (73%)
Frame = +2
Query: 53 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 232
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 233 AERER 247
ERE+
Sbjct: 296 EEREK 300
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 91.5 bits (217), Expect = 8e-20
Identities = 43/87 (49%), Positives = 56/87 (64%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G +NGQ
Sbjct: 243 MDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQ 302
Query: 436 TRXHALLAFTLGVKQLIVGVNKMDSLN 516
TR HA L LG+ +++V VNK+D ++
Sbjct: 303 TREHAYLLRALGISEIVVSVNKLDLMS 329
Score = 74.1 bits (174), Expect = 1e-14
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +2
Query: 53 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 232
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 233 AERER 247
ER R
Sbjct: 235 EERAR 239
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 70.5 bits (165), Expect = 2e-13
Identities = 34/78 (43%), Positives = 51/78 (65%)
Frame = +1
Query: 274 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRXHAL 453
++ET+ + +D PGH D+IKNMITG + D A+++V+A G+ QTR H L
Sbjct: 110 EYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP-------QTREHLL 162
Query: 454 LAFTLGVKQLIVGVNKMD 507
LA +GVKQ++V +NK+D
Sbjct: 163 LARQVGVKQIVVYINKVD 180
Score = 35.1 bits (77), Expect = 0.007
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 47 KEKTHINIVVIGHVDSGKSTTTGHLIYKC 133
++K H+NI IGHVD GK+T T I KC
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.005
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 136
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 1.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 387
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.005
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 136
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 1.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 387
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 34.7 bits (76), Expect = 0.009
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = -1
Query: 432 TVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNI-- 259
+V+ +T T ++ + +SL SC L + S + + S + SN
Sbjct: 109 SVMNETDSSSTSVEDVNKENILSLNDSCLIKLSDDEASNKSSRSSTPRNSIKSNSSNQGH 168
Query: 258 -DL-IPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPH 130
D+ IP+ A S+ N++ + +D LP + S V+L +P H
Sbjct: 169 GDIPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 34.7 bits (76), Expect = 0.009
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 295 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRXHALLAFTLGV 474
+V+ +D PGH + M+ G + D A+L++A QT H + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 475 KQLIVGVNKMD 507
K +I+ NK+D
Sbjct: 163 KHIIILQNKVD 173
Score = 25.0 bits (52), Expect = 7.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 35 PKMGKEKTHINIVVIGHVDSGKST 106
P + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 33.9 bits (74), Expect = 0.016
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +1
Query: 277 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRXH 447
FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
Score = 29.1 bits (62), Expect = 0.46
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCGGI 142
NI + H+DSGK+T T ++Y G I
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI 86
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.5 bits (73), Expect = 0.022
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 277 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 402
F+ ++T +D PGH F G + AD VL+VA G
Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 31.1 bits (67), Expect = 0.11
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRXHALLAFTLG 471
Y + +ID+PGH DF + + + D A ++V A G I+ Q A+
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEGVCSQTITVLRQ-------AWIDR 146
Query: 472 VKQLIVGVNKMDSL 513
+K ++V +NKMD L
Sbjct: 147 IKVILV-INKMDRL 159
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 30.7 bits (66), Expect = 0.15
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 268 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 402
++ + Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
Score = 24.6 bits (51), Expect = 10.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCGGIDK 148
N VI H+D GKST + ++ G I++
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINE 87
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 30.3 bits (65), Expect = 0.20
Identities = 26/84 (30%), Positives = 38/84 (45%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
I+ A F + +ID PGH DF + + D AV I+ + AG+ Q
Sbjct: 81 INSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-----DGSAGV--EAQ 133
Query: 436 TRXHALLAFTLGVKQLIVGVNKMD 507
T+ A G+ ++I VNKMD
Sbjct: 134 TKVVWKQATKRGIPKVIF-VNKMD 156
Score = 28.7 bits (61), Expect = 0.61
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCG 136
N+ +I H+D+GK+T T ++Y G
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG 53
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.35
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 304 IIDAPGHRDFIKNMITGTSQADCAVLIV 387
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 2.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 307 IDAPGHRDFIKNMITGTSQADCAVLIV 387
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 3.3
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 253 QIDIALWKFETSKYYV--TIIDAPGHRDFIKN 342
+I+I + E +++ T+ID PG DFI N
Sbjct: 72 EIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAC4D7.09 |tif223||translation initiation factor
eIF2B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 468
Score = 26.2 bits (55), Expect = 3.3
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = -1
Query: 381 EHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDLIPRSRSAFSLSNTQAYL 202
EH+A+ L S +L IS R N GNI L S + + S + L+ + A
Sbjct: 5 EHAALPLASS-PSILGPISGGR--NRGNIQLQSIPIEFQAVVFAGFGNSLYPLTGSDALP 61
Query: 201 KDPLPI 184
K LPI
Sbjct: 62 KALLPI 67
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 25.8 bits (54), Expect = 4.3
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -1
Query: 315 SINDGNIVLASFELPESNIDLIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIP 136
S++ + L S+ P S + A ++YL+ PL S S S + +R SIP
Sbjct: 305 SVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSASRHTALRTSIP 364
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 4.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 248 HAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 150
H+H PL P+P +L P P P S WY
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWY 166
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 25.4 bits (53), Expect = 5.7
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 227 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWWT 99
V +PK I I++ F P S S C+Y S D W T
Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 7.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 182 PGPPSRTSRWYVCQYHHIC 126
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 24.6 bits (51), Expect = 10.0
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = -1
Query: 261 IDLIPRSRSAFSLSNTQAYLKDPL 190
ID++PR+ S++S N+ + +P+
Sbjct: 350 IDMLPRATSSWSTKNSLVFSSNPI 373
>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 24.6 bits (51), Expect = 10.0
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Frame = -1
Query: 504 HFVYSYDELFDTE--GESEQGMLT-GLTVLRDTSFEFTG-TGSYDEHSAISLRGSCDHVL 337
H+ +SYD D G+S+ G L+ G D+S T + + + G D +L
Sbjct: 69 HYCHSYDHNSDDTPLGKSKVGYLSPGPGYECDSSPALIDKTLEWLKEHQDDVLGGIDFIL 128
Query: 336 DEISVSRSINDGNIVLASFELPESNIDLIPRSRSAF 229
SR ND + E+ SN DL+ + AF
Sbjct: 129 WTGDNSRHDNDNHFPRTQSEILASNEDLVNKMIEAF 164
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 24.6 bits (51), Expect = 10.0
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -1
Query: 381 EHSAISLRGSCDHVLDEISVSRSINDGNIVLASF-ELPESNI-DLIPRSRS 235
EH +IS +G+C+ V + S + +LASF E + +I D+ P RS
Sbjct: 175 EHKSISTKGACNRVRSARRPANSSKES--LLASFHETGKVHIWDIAPHLRS 223
>SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 96
Score = 24.6 bits (51), Expect = 10.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 351 CDHVLDEISVSRSINDGNIVLASFEL 274
CDH+L IS SR G + FEL
Sbjct: 23 CDHLLQYISNSRDSKAGLKIFLVFEL 48
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,213,787
Number of Sequences: 5004
Number of extensions: 43372
Number of successful extensions: 169
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 233995432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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