Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0762.Seq
(558 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 150 5e-37
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 150 5e-37
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 150 5e-37
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 150 5e-37
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 98 4e-21
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 92 3e-19
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 66 2e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 63 1e-10
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 38 0.003
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 38 0.003
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 36 0.018
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 36 0.024
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 34 0.056
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 34 0.074
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 34 0.074
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.17
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.17
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.17
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 31 0.52
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 31 0.52
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 0.69
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 0.91
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.2
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.2
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 1.6
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 1.6
At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) / beta-fruc... 28 4.9
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 4.9
At5g13650.2 68418.m01585 elongation factor family protein contai... 27 6.4
At5g13650.1 68418.m01584 elongation factor family protein contai... 27 6.4
At5g02010.1 68418.m00120 expressed protein contains Pfam profile... 27 6.4
At4g20430.1 68417.m02981 subtilase family protein contains Pfam ... 27 8.5
At3g05470.1 68416.m00599 formin homology 2 domain-containing pro... 27 8.5
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 27 8.5
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 150 bits (364), Expect = 5e-37
Identities = 70/85 (82%), Positives = 77/85 (90%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
IDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 436 TRXHALLAFTLGVKQLIVGVNKMDS 510
TR HALLAFTLGVKQ+I NKMD+
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDA 157
Score = 132 bits (318), Expect = 2e-31
Identities = 62/69 (89%), Positives = 63/69 (91%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 221 DKLKAERER 247
DKLKAERER
Sbjct: 61 DKLKAERER 69
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 150 bits (364), Expect = 5e-37
Identities = 70/85 (82%), Positives = 77/85 (90%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
IDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 436 TRXHALLAFTLGVKQLIVGVNKMDS 510
TR HALLAFTLGVKQ+I NKMD+
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDA 157
Score = 132 bits (318), Expect = 2e-31
Identities = 62/69 (89%), Positives = 63/69 (91%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 221 DKLKAERER 247
DKLKAERER
Sbjct: 61 DKLKAERER 69
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 150 bits (364), Expect = 5e-37
Identities = 70/85 (82%), Positives = 77/85 (90%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
IDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 436 TRXHALLAFTLGVKQLIVGVNKMDS 510
TR HALLAFTLGVKQ+I NKMD+
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDA 157
Score = 132 bits (318), Expect = 2e-31
Identities = 62/69 (89%), Positives = 63/69 (91%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 221 DKLKAERER 247
DKLKAERER
Sbjct: 61 DKLKAERER 69
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 150 bits (364), Expect = 5e-37
Identities = 70/85 (82%), Positives = 77/85 (90%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
IDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 436 TRXHALLAFTLGVKQLIVGVNKMDS 510
TR HALLAFTLGVKQ+I NKMD+
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDA 157
Score = 132 bits (318), Expect = 2e-31
Identities = 62/69 (89%), Positives = 63/69 (91%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 221 DKLKAERER 247
DKLKAERER
Sbjct: 61 DKLKAERER 69
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 97.9 bits (233), Expect = 4e-21
Identities = 45/84 (53%), Positives = 58/84 (69%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQ
Sbjct: 167 VEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQ 226
Query: 436 TRXHALLAFTLGVKQLIVGVNKMD 507
TR H LA TLGV +LIV VNKMD
Sbjct: 227 TREHVQLAKTLGVSKLIVVVNKMD 250
Score = 68.1 bits (159), Expect = 4e-12
Identities = 28/64 (43%), Positives = 46/64 (71%)
Frame = +2
Query: 50 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 229
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 230 KAER 241
+ ER
Sbjct: 158 EEER 161
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = +1
Query: 262 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQT 438
+A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG GQT
Sbjct: 307 VAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQT 366
Query: 439 RXHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRK 546
R HA + GV+Q+IV +NKMD + + DL K
Sbjct: 367 REHARVLRGFGVEQVIVAINKMDIVGYSKERFDLIK 402
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = +2
Query: 56 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 235
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 236 ERER 247
ERER
Sbjct: 298 ERER 301
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 65.7 bits (153), Expect = 2e-11
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
I+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G Q
Sbjct: 130 INTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------Q 182
Query: 436 TRXHALLAFTLGVKQLIVGVNKMDSLN 516
T+ H LLA +GV ++V +NK D ++
Sbjct: 183 TKEHILLAKQVGVPDMVVFLNKEDQVD 209
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 38 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 172
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +1
Query: 274 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRXHAL 453
++ET+K + +D PGH D++KNMITG +Q D +L+V+ G QT+ H L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHIL 176
Query: 454 LAFTLGVKQLIVGVNKMD 507
LA +GV L+ +NK+D
Sbjct: 177 LARQVGVPSLVCFLNKVD 194
Score = 32.7 bits (71), Expect = 0.17
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 47 KEKTHINIVVIGHVDSGKSTTT 112
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +1
Query: 283 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRXHALLAF 462
T + +V+ +D PGH + M+ G + D A+L++AA QT H
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 463 TLGVKQLIVGVNKMDSLN 516
+ +K +I+ NK+D +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +1
Query: 283 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRXHALLAF 462
T + +V+ +D PGH + M+ G + D A+L++AA QT H
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 463 TLGVKQLIVGVNKMDSLN 516
+ +K +I+ NK+D +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 35.9 bits (79), Expect = 0.018
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = +1
Query: 277 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRX 444
FE SK +V+ +D PGH + M+ G + D A+L++AA QT
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 445 HALLAFTLGVKQLIVGVNKMDSLNHH 522
H + +K +I+ NK+D + +
Sbjct: 166 HLAAVEIMQLKHIIILQNKIDLIQEN 191
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 35.5 bits (78), Expect = 0.024
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +1
Query: 295 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRXHALLAFTLGV 474
+V+ +D PGH + M+ G + D A+LI+AA QT H + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 475 KQLIVGVNKMDSLNHH 522
K +I+ NK+D + +
Sbjct: 174 KDIIIIQNKIDLIQEN 189
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 34.3 bits (75), Expect = 0.056
Identities = 28/93 (30%), Positives = 42/93 (45%)
Frame = +1
Query: 280 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRXHALLA 459
E S Y + +ID PGH DF + S A+L+V A G QT + LA
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG-------VQAQTVANFYLA 183
Query: 460 FTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRK 558
F + ++ +NK+D T P+ K++ K
Sbjct: 184 FEANL-TIVPVINKID---QPTADPERVKAQLK 212
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 29 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 148
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.9 bits (74), Expect = 0.074
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 402
+ + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 197 MSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.9 bits (74), Expect = 0.074
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 402
+ + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 197 MSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 298 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 402
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCGG 139
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 402
Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.17
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 53 KTHINIVVIGHVDSGKSTTTGHLIYKCG 136
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
Score = 27.5 bits (58), Expect = 6.4
Identities = 24/75 (32%), Positives = 33/75 (44%)
Frame = +1
Query: 289 KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRXHALLAFTL 468
K+ + IID PGH DF + D A+ + + AG+ +T A
Sbjct: 160 KHRINIIDTPGHVDFTLEVERALRVLDGAICLF-----DSVAGVEPQSETVWRQ--ADKY 212
Query: 469 GVKQLIVGVNKMDSL 513
GV + I VNKMD L
Sbjct: 213 GVPR-ICFVNKMDRL 226
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 31.1 bits (67), Expect = 0.52
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRXH 447
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCGGI 142
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 31.1 bits (67), Expect = 0.52
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRXH 447
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCGGI 142
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 30.7 bits (66), Expect = 0.69
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 277 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 402
+E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 163
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 30.3 bits (65), Expect = 0.91
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +1
Query: 304 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRXHALLAFTLGVKQL 483
+ID PGH F G+S D A+L+V + + G+ QT +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QT-IESLNLLRMRNTEF 756
Query: 484 IVGVNKMDSL 513
I+ +NK+D L
Sbjct: 757 IIALNKVDRL 766
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 304 IIDAPGHRDFIKNMITGTSQADCAVLIV 387
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 304 IIDAPGHRDFIKNMITGTSQADCAVLIV 387
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 286 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 387
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCG 136
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 298 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 387
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) /
beta-fructofuranosidase / invertase, vacuolar identical
to beta-fructosidase GB:CAA67560 GI:1429209 [Arabidopsis
thaliana]; supported by full-length cDNA GI:14517549;
identical to cDNA Beta-fructosidase GI:3115854
Length = 648
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -1
Query: 537 IWAHCMVVQ*IHFVYSYDELFDTEGESEQGMLTG-LTVLRDTSFEFTGTGSYDE 379
+W H + IH++Y + + G+ TG T L D S TGS DE
Sbjct: 148 VWGHAVSKDLIHWLYLPIAMVPDQWYDANGVWTGSATFLDDGSIVMLYTGSTDE 201
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 307 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 402
+D PGH F G D A+++VAA G
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG 588
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 27.5 bits (58), Expect = 6.4
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = +1
Query: 298 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRXHALLAFTLGVK 477
V IID PGH DF + + D +L+V + G QTR A G
Sbjct: 148 VNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP-------QTRFVLKKALEFG-H 199
Query: 478 QLIVGVNKMD 507
++V VNK+D
Sbjct: 200 AVVVVVNKID 209
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 27.5 bits (58), Expect = 6.4
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = +1
Query: 298 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRXHALLAFTLGVK 477
V IID PGH DF + + D +L+V + G QTR A G
Sbjct: 147 VNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP-------QTRFVLKKALEFG-H 198
Query: 478 QLIVGVNKMD 507
++V VNK+D
Sbjct: 199 AVVVVVNKID 208
>At5g02010.1 68418.m00120 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 546
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -1
Query: 393 GSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDLIPR 244
G E+S L+ D + + +IN +I LA E+PES ++ +PR
Sbjct: 237 GGLQENSRKQLQHKRDCTNQILKAAMAIN--SITLADMEIPESYLESLPR 284
>At4g20430.1 68417.m02981 subtilase family protein contains Pfam
profile: PF00082 subtilase family
Length = 856
Score = 27.1 bits (57), Expect = 8.5
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -1
Query: 480 LFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSIN 307
+FDT E L G+ F +TGT ++ IS GS D L I+VS+ N
Sbjct: 714 IFDTSFEDYMSFLCGINGSAPVVFNYTGTNCLRNNATIS--GS-DLNLPSITVSKLNN 768
>At3g05470.1 68416.m00599 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 884
Score = 27.1 bits (57), Expect = 8.5
Identities = 24/85 (28%), Positives = 36/85 (42%)
Frame = -1
Query: 390 SYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDLIPRSRSAFSLSNTQ 211
S D+ S S+ G + +S + S + V +S E +D+ SRS F +S +
Sbjct: 308 SDDDESFHSVGGGSQYSNPRLSNASSASGSVNVGSSQRFSEHKLDIPECSRSDFGISVSA 367
Query: 210 AYLKDPLPISWASFSNFSMVRLSIP 136
P P FSN + LS P
Sbjct: 368 PPPPPPPPPPLPQFSNKRIHTLSSP 392
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 27.1 bits (57), Expect = 8.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -1
Query: 390 SYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDLIPRSRSAFSLSN 217
++D+HS +L+ D + D + ++ N+VL F P+ D + +R A L N
Sbjct: 52 AFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIAR-AIELPN 108
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,808,385
Number of Sequences: 28952
Number of extensions: 234933
Number of successful extensions: 676
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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