Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0761.Seq
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    27   0.13 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    24   0.94 
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    24   0.94 
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    24   0.94 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   3.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.0  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +2

Query: 146 NLKHYKEYSKSCLVVLNTDILTEMVRNI--EYVFEAKAFFP 262
           N+K  K   + C + +N   L E  RN+  + +F  +A+FP
Sbjct: 718 NMKLEKVPGECCAICVNATSLVESNRNVPQKCIFNGQAYFP 758


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -1

Query: 282 LLHKPGQGKNAFAS--KTYSIFLTISVRISVFNTTKHDLEYSL 160
           LL K G   NA+A    TYS+F+  ++ ++V+  T   +++ +
Sbjct: 237 LLQKMG---NAYARTYSTYSLFMMANITVAVYGFTSEIVDHGI 276


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -1

Query: 282 LLHKPGQGKNAFAS--KTYSIFLTISVRISVFNTTKHDLEYSL 160
           LL K G   NA+A    TYS+F+  ++ ++V+  T   +++ +
Sbjct: 237 LLQKMG---NAYARTYSTYSLFMMANITVAVYGFTSEIVDHGI 276


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -1

Query: 282 LLHKPGQGKNAFAS--KTYSIFLTISVRISVFNTTKHDLEYSL 160
           LL K G   NA+A    TYS+F+  ++ ++V+  T   +++ +
Sbjct: 237 LLQKMG---NAYARTYSTYSLFMMANITVAVYGFTSEIVDHGI 276


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -2

Query: 473  LPDSHPQPIRRAPTVPAAPIPPQARPG 393
            +PD+  +     P  P  P PPQ   G
Sbjct: 994  IPDNPSREDCTKPPEPVTPAPPQVTTG 1020


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +1

Query: 619 HHGYWNY 639
           HHG WNY
Sbjct: 72  HHGQWNY 78


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 269 LVKEKMPLLRKHIR 228
           L+KE MPL RK +R
Sbjct: 449 LIKETMPLPRKLVR 462


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,284
Number of Sequences: 336
Number of extensions: 2923
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)