Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0761.Seq
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0706 + 24457148-24458031,24458621-24458822,24458896-244590... 34 0.085
07_01_0313 + 2216498-2216953 33 0.26
08_02_0743 - 20647440-20647927,20647997-20648426,20650127-206505... 32 0.34
04_04_0176 - 23329589-23331043 32 0.45
02_03_0367 + 18220099-18220905 32 0.45
06_01_0728 - 5356400-5356676,5356888-5357090,5357181-5357474,535... 31 0.60
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 31 0.60
04_01_0232 + 2943241-2943604,2944191-2944782,2944993-2945179 31 0.60
05_05_0033 + 21737075-21737721,21737819-21738134,21738463-21739722 31 1.0
01_01_0070 - 542603-542686,542803-543441 31 1.0
12_01_0901 - 8736190-8736240,8736426-8736821 30 1.4
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 30 1.4
12_01_1078 - 11202284-11202343,11202941-11203000,11203036-112030... 30 1.8
08_02_0516 + 18080706-18080760,18081796-18081885,18082479-180825... 30 1.8
07_01_0310 + 2209084-2209554 30 1.8
06_03_0219 - 18227559-18227858,18227864-18228340 30 1.8
06_01_0099 + 824557-825532,826090-826245,826422-828064 30 1.8
03_05_0543 - 25404630-25405408,25405461-25405605 30 1.8
10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595 29 2.4
08_02_1615 + 28257275-28258428,28258523-28259144 29 2.4
07_03_1160 - 24430240-24431268 29 2.4
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 29 2.4
04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733 29 2.4
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 29 2.4
04_04_1057 - 30451759-30452523,30452627-30452701,30453180-304532... 29 3.2
12_02_1174 - 26696869-26698191 29 4.2
12_01_0442 + 3495333-3496484 29 4.2
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 29 4.2
08_01_0059 - 394001-394708 29 4.2
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 29 4.2
06_02_0208 - 13026296-13026654,13027394-13027497,13028109-130282... 29 4.2
05_07_0220 + 28482589-28483752 29 4.2
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 4.2
04_04_0758 - 27826787-27828178 29 4.2
04_04_0757 - 27822139-27823530 29 4.2
03_03_0249 + 15832086-15833261 29 4.2
07_03_1107 - 24024387-24024497,24025799-24026410 28 5.6
03_05_0576 + 25765137-25766420 28 5.6
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 28 5.6
01_02_0007 + 10132380-10133201 28 5.6
12_02_0063 + 13098519-13099585,13099759-13099906 28 7.4
12_02_0058 + 13015401-13016654 28 7.4
11_01_0385 + 2915532-2916482 28 7.4
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 28 7.4
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 28 7.4
10_01_0112 - 1386762-1386953,1387228-1387309,1387399-1387509,138... 28 7.4
09_04_0430 + 17502387-17503505 28 7.4
09_01_0016 - 376742-376883,377973-378964 28 7.4
07_01_0312 + 2214050-2214556 28 7.4
06_03_1358 - 29548440-29549315 28 7.4
03_06_0187 + 32209924-32210634 28 7.4
03_05_0781 + 27654764-27655429,27655902-27656004,27656535-276565... 28 7.4
03_05_0587 - 25878948-25879201,25879290-25879361,25881091-25881451 28 7.4
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 28 7.4
02_02_0338 + 9105725-9106581,9106950-9107091 28 7.4
02_01_0597 - 4433105-4433467,4433671-4433860,4434569-4434786,443... 28 7.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 27 9.7
08_02_1012 + 23550314-23551504 27 9.7
08_01_0005 + 47929-48201,48663-48788,49009-49054,49188-49270,496... 27 9.7
07_01_0862 - 7172083-7172931 27 9.7
06_01_1113 - 9164953-9165044,9166453-9166586,9166624-9166734,916... 27 9.7
06_01_1069 + 8731567-8731632,8732120-8732281,8733028-8733081,873... 27 9.7
06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187,358... 27 9.7
04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355 27 9.7
>01_05_0706 +
24457148-24458031,24458621-24458822,24458896-24459080,
24459170-24459503,24459614-24459818,24460022-24460128,
24460220-24460381
Length = 692
Score = 34.3 bits (75), Expect = 0.085
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 488 PVTKALPDSHPQPIRRAPTVPAAPIPPQARP 396
P+T ALP + P R P AAP PP++RP
Sbjct: 129 PMTNALPAGNICPSGRVPVAAAAPPPPRSRP 159
>07_01_0313 + 2216498-2216953
Length = 151
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = -2
Query: 488 PVTKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFP 309
P A+P P+ PTVPA +PP + AV LP V T+PP +V P
Sbjct: 64 PPIPAVPKVTLPPMPAIPTVPAVTMPPMP---AVPAVPAVTLPPMPAV-PTVPPNTVVVP 119
Query: 308 GVIIQA 291
++ A
Sbjct: 120 AAVVPA 125
>08_02_0743 -
20647440-20647927,20647997-20648426,20650127-20650570,
20650639-20650692
Length = 471
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -2
Query: 497 NQDPVTKALPDSHPQPIRRAPTVPAAPIPPQARPGQA 387
++DP++ A+P S +P ++A T PA PP A G A
Sbjct: 121 SKDPISDAIPKSRGRPPKKAKTAPAP--PPAAGDGSA 155
>04_04_0176 - 23329589-23331043
Length = 484
Score = 31.9 bits (69), Expect = 0.45
Identities = 28/66 (42%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = -2
Query: 488 PVTKALPDSHPQPIRRAP----TVPAAPIPPQARPGQAQPLQAVLLPRAVQV-HRTLPPL 324
P AL S P P RR P T A P PP+ P Q QP LLP A R PP
Sbjct: 67 PGHSALSPSPPPPPRRGPLPDPTAKAEPEPPKPTP-QQQP--QPLLPAAKPAPPRASPPT 123
Query: 323 RLVFPG 306
VF G
Sbjct: 124 TAVFIG 129
>02_03_0367 + 18220099-18220905
Length = 268
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -2
Query: 446 RRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFP 309
+R P P +P+ P+ P Q QP Q A +VH PP +FP
Sbjct: 150 KRRPPPPPSPMSPKVTPAQQQPPQP-----AEKVHDASPPPSSLFP 190
>06_01_0728 -
5356400-5356676,5356888-5357090,5357181-5357474,
5357940-5358063,5358157-5359496
Length = 745
Score = 31.5 bits (68), Expect = 0.60
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -2
Query: 473 LPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPP 327
L +H QP ++ P P P+P A+P Q A P A LPP
Sbjct: 30 LHPNHHQP-QQPPMTPTTPLPEAAKPPQNPEKTAASSPHAPSSRPPLPP 77
>04_04_1104 -
30928475-30928501,30929008-30929110,30929287-30929340,
30929803-30929895,30930063-30930140,30930416-30930527,
30930618-30930756,30930823-30930910,30930984-30931079,
30931675-30931781,30931874-30932009,30932089-30932186,
30932954-30933047,30933132-30933301,30933749-30933819,
30936066-30936194,30936552-30936654,30936764-30936907,
30937123-30937245,30937482-30937563,30939044-30939120,
30939261-30939315,30939365-30939443,30939544-30939620,
30939739-30939869,30939947-30940120,30940245-30940310,
30940937-30941572
Length = 1113
Score = 31.5 bits (68), Expect = 0.60
Identities = 25/59 (42%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Frame = -2
Query: 476 ALPDSHPQ---PIRRAPTVPA---APIPPQARPGQAQPLQAV---LLPRAVQVHRTLPP 327
A PD+ P P RAP VPA AP PP PG Q Q V L+P + + T PP
Sbjct: 151 APPDNVPPASGPASRAPLVPAPPPAPFPPVPTPGMTQAPQMVPGALIPMVLPI--TDPP 207
>04_01_0232 + 2943241-2943604,2944191-2944782,2944993-2945179
Length = 380
Score = 31.5 bits (68), Expect = 0.60
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = -2
Query: 491 DPVTKALPDSHPQ--PIRRAP-TVPAAPIPPQARPGQAQPLQAVLLPRAVQVHR 339
+ + K+L ++P PI +A T+P AP PPQ PG+A P A ++P Q+ R
Sbjct: 129 ESIWKSLKLAYPPTVPIDKAKATLPPAPFPPQ-HPGRADP--AEMMPPTKQIVR 179
>05_05_0033 + 21737075-21737721,21737819-21738134,21738463-21739722
Length = 740
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 436 RQCQQHRFHLKHVRGKHNHFRQFFYL 359
RQ QQ + +H+R +H+H R +FYL
Sbjct: 167 RQQQQQQLKGRHLRPRHSHRRGYFYL 192
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = -2
Query: 488 PVTKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPL 324
PVT P P P+ P P +PP P A P +A P A+ T PP+
Sbjct: 99 PVTP--PPVTPPPVSPPPATPPPALPPSTPPPVAAPAEA---PAALPPATTPPPV 148
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -2
Query: 488 PVTKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLP 360
PV A S P P APT A P PP A P +A P+ + P
Sbjct: 40 PVPTAPAKSPPAPATPAPT--ATPTPPVA-PAKAPPVAPAVAP 79
>12_01_0901 - 8736190-8736240,8736426-8736821
Length = 148
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -2
Query: 494 QDPVTKALPDSHPQPIRRAP-TVPAAPIPPQARPGQAQPLQA 372
Q P AL H QP+R A VP +P PP R Q P A
Sbjct: 61 QPPPRPALSRLHYQPLRLADLQVPLSPPPPSTRQQQLPPRPA 102
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = -2
Query: 488 PVTKALPDS---HPQPIRRAPTVPAAPIPPQARPGQAQPLQ 375
PV+ A P + P P + P AP PPQ RP P Q
Sbjct: 47 PVSSAAPTAPPPKPSPTPPPASPPPAPTPPQTRPPSPPPQQ 87
>12_01_1078 -
11202284-11202343,11202941-11203000,11203036-11203050,
11203322-11204026
Length = 279
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = -2
Query: 476 ALPDSHPQPIRRAPTVPAA--PIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRL 318
A P HP P R + V A P P RP A + V LP +++V R R+
Sbjct: 25 AFPPHHPSPARGSIGVRCAHSPSPHPLRPSAATADEEVSLPPSLRVSRLAEEFRV 79
>08_02_0516 +
18080706-18080760,18081796-18081885,18082479-18082573,
18083658-18083726,18083812-18084393
Length = 296
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = -2
Query: 470 PDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPP 327
P S P + P PPQ +P Q Q LQ LP+ +Q LPP
Sbjct: 195 PQSQQTPQPQPQVHPQPQQPPQLQP-QPQLLQQPQLPQQLQPQSQLPP 241
>07_01_0310 + 2209084-2209554
Length = 156
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -2
Query: 488 PVTKALPDSHPQPIRRAPTVPAAPIPPQ-ARPGQA-QPLQAV-LLPRAVQVHRTLPPLRL 318
P A+P + PI PTVP A +PP A P A P+ AV +P V LPP+
Sbjct: 34 PAIPAIPAATLPPIPAVPTVPNAALPPMPAVPKVALPPMPAVPAVPTVPAV--ALPPMPA 91
Query: 317 V 315
V
Sbjct: 92 V 92
>06_03_0219 - 18227559-18227858,18227864-18228340
Length = 258
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/55 (41%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = -2
Query: 476 ALPDSHPQPIR-RAPTV--PAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLR 321
+LP P P A TV PAAP PP A P P A+ PR LPP R
Sbjct: 70 SLPRCRPPPAACAASTVRRPAAPSPPPASPPPPPPRLALRFPRRPP---ELPPRR 121
>06_01_0099 + 824557-825532,826090-826245,826422-828064
Length = 924
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = -2
Query: 464 SHPQ---PIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRT 336
+HP P RAP + P+PP + P Q P + PR HR+
Sbjct: 402 THPNSFSPHHRAPAMAPYPLPPPSPPQQQLPPASSSKPRRPPPHRS 447
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = -2
Query: 491 DPVTKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVF 312
+ +T LP P P+ +PT P+ PP +P Q +P + P PP R
Sbjct: 103 EALTITLPKKTPSPLTPSPT-PSPVTPPPQQPPQPEPRRPPAAPLPGVRTPPSPPRRAPA 161
Query: 311 P 309
P
Sbjct: 162 P 162
>10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595
Length = 514
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 482 TKALPD--SHPQPIRRAPTVPAAPIPPQARPGQAQ 384
T+ LP SHP PIR A V P PP P Q
Sbjct: 313 TQQLPPLMSHPPPIRMASPVRIRPAPPLFTPSAVQ 347
>08_02_1615 + 28257275-28258428,28258523-28259144
Length = 591
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = -2
Query: 470 PDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRL 318
P SHPQP A P P P P ++ P + + + LPP L
Sbjct: 45 PQSHPQPDAPAAAAPPPPAPLTPPPPKSPPPPPHIQTTDLPPPKPLPPAPL 95
>07_03_1160 - 24430240-24431268
Length = 342
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = -2
Query: 503 EGNQDPVTKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPL 324
+G P + PD PQP P +P PPQ P +P+ + T P
Sbjct: 95 DGPPIPPVQPCPDQPPQPKPDGPPLPNPNQPPQPNPNGPPKPDMPPMPKPDGLPNTYEPS 154
Query: 323 R 321
R
Sbjct: 155 R 155
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 470 PDSHPQPIRRAPTVPAAPIPPQA-RPGQAQP 381
PD PQPI P +P +PP+ +P Q P
Sbjct: 156 PDQPPQPISDGPPLPNPNVPPKPDQPPQPIP 186
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 470 PDSHPQPIRRAPTVPAAPIPPQARPGQAQP 381
PD P P+ + P+ P+PP RP ++QP
Sbjct: 126 PDLRPLPLLKQPSPDLRPLPPLKRP-ESQP 154
>04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733
Length = 760
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -2
Query: 488 PVTKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQ 375
PV P QP R+ P P PPQA P A PLQ
Sbjct: 399 PVQLQTPPPVKQPARQHQPQPTPP-PPQAAPIPAAPLQ 435
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 470 PDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLP 360
P P AP PAAP ARP QP AV P
Sbjct: 70 PRPPPPSTTTAPPPPAAPAVTPARPPPQQPAVAVAAP 106
>04_04_1057 -
30451759-30452523,30452627-30452701,30453180-30453254,
30453503-30453591,30454058-30454157,30454244-30454388,
30454609-30454658,30455033-30455114,30455200-30455282,
30455360-30455429,30455523-30455632,30455719-30455872,
30456639-30456796,30457338-30457517
Length = 711
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = -2
Query: 515 WW*IEGNQDPVTKALPDSHP-QPIRRAPTVPAAPIPP-QARPGQAQPLQAVLLPRAVQVH 342
W ++ + P P + P +PI P +P + PG L A L P+ V+
Sbjct: 403 WSPLQASCHPFITGEPFTGPYEPIPETPKIPIGRAAAVEHNPGGGHWLAAGLSPQVGSVN 462
Query: 341 RTLPP 327
R+LPP
Sbjct: 463 RSLPP 467
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = -2
Query: 482 TKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPP 327
T+ P P P++ P P+ P PP P P + P VQ PP
Sbjct: 133 TRVEPPHRPPPVKPQPP-PSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPP 183
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = -2
Query: 494 QDPVTKALPDSHPQPIRRAPTVPA---APIPPQARPGQAQPLQAVLLPRAVQVHRTLPP 327
Q P T P P P P P A + P+ +P P V +PR ++ + PP
Sbjct: 211 QPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAPVKMPRVLEPKPSPPP 269
>12_01_0442 + 3495333-3496484
Length = 383
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 482 TKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQP 381
T LP + P ++AP AP PP P A P
Sbjct: 198 TPKLPVTRPPRTKQAPPTAPAPAPPPPPPQPASP 231
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = -2
Query: 488 PVTKALPDSHPQPIRRAPTVPAAP--IPPQARPGQAQPLQA 372
P+ A P P PTVPA P +PP P A P A
Sbjct: 529 PMPPAPAPPIPTPSMPFPTVPAPPVTVPPATAPSMAAPAAA 569
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 458 PQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRA 354
P P R P PA P+P P P L P A
Sbjct: 354 PAPHPRVPRAPAPPVPAPPAPTPPIPTPPALAPPA 388
>08_01_0059 - 394001-394708
Length = 235
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -2
Query: 458 PQPIRRAPTVPAAPIPP--QARPGQAQPLQ 375
P P RRAP PA P PP +A P + P++
Sbjct: 4 PPPPRRAPPPPATPPPPPRRAPPPPSPPIR 33
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = -2
Query: 470 PDSHPQPIRRAPTVPAAPI----PPQARPGQAQPLQAVLLP 360
P + P P RRAP P+ PI PP RP P L P
Sbjct: 14 PATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAP 54
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -2
Query: 494 QDPVTKALPDSH--PQPIRRAPTVPAAPIPPQARPGQAQPLQAVL-LPRAVQVHRTLPP 327
QDP +LP + P P APT P AP P R P QA L P + + PP
Sbjct: 161 QDPAP-SLPHAPAPPPPQAPAPTPPQAPAPTPPRAPTPTPPQAPLPAPSKSRASQAPPP 218
>06_02_0208 -
13026296-13026654,13027394-13027497,13028109-13028200,
13028418-13028774,13029932-13030109,13030454-13030507,
13030701-13030784,13031521-13031714
Length = 473
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 470 PDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLP-PLRLVFP 309
P+S P+P AP AA +A P Q QP Q P Q+ P P+ + P
Sbjct: 13 PESEPEPAAPAPAAAAA--EAKATPPQPQPQQKPAAPVQPQMPTPRPWPVAFIPP 65
>05_07_0220 + 28482589-28483752
Length = 387
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Frame = -2
Query: 500 GNQDPVTKALPDSHPQPIRRAPTVPAAPIPPQARPGQ-----AQPLQAVLLPRAVQVHRT 336
G Q D + + TVPA P PPQ+ P A P + +LP+++ + T
Sbjct: 150 GRQSSAIALAGDLRRLRLPKEQTVPALPPPPQSPPAALMNPVAVPEKQAVLPKSISIRST 209
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 470 PDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQA 372
P S PQP RAP P PP+ RP +P+ A
Sbjct: 368 PPSIPQPRGRAPN----PSPPKRRPQPPEPMAA 396
>04_04_0758 - 27826787-27828178
Length = 463
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -2
Query: 431 VPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRL 318
V A P P Q Q L +L R + VH PP L
Sbjct: 11 VVAVPFPAQGHLNQLMHLSLLLASRGLDVHYAAPPAHL 48
>04_04_0757 - 27822139-27823530
Length = 463
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -2
Query: 431 VPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRL 318
V A P P Q Q L +L R + VH PP L
Sbjct: 11 VVAVPFPAQGHLNQLMHLSLLLASRGLDVHYAAPPAHL 48
>03_03_0249 + 15832086-15833261
Length = 391
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = -2
Query: 470 PDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLL---PRAVQVHRTLPPLRLVFPGV 303
P SH +RR T +AP P+A P P A P A+ H + V PG+
Sbjct: 17 PPSHAAGLRRLSTRASAPTTPRASPATPSPSSAAAAAPSPSALVAHLAAAGVS-VLPGL 74
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = -2
Query: 482 TKALPDSHPQPIRRAPTVPAAPIPPQA----RPGQAQPLQAVLLPR-AVQVHRTLPP 327
T P + P APT PA P P +A P +A P ++ P A + + PP
Sbjct: 51 TTTTPPAASTPPAAAPTTPATPAPAEAPTTPAPTKAPPTKSTKAPAPAPKAAKATPP 107
>03_05_0576 + 25765137-25766420
Length = 427
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -2
Query: 479 KALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLV 315
+A P P P P P++P PP P A + +V P + LPP+ V
Sbjct: 66 EAPPSPSPSPSPSPPPQPSSPPPPPPSPPPAAAV-SVSPPTQPRPRPELPPVEAV 119
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -2
Query: 506 IEGNQDPV-TKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRT 336
++ D V T P + P P APT+P P PP+ +P P + L+ + T
Sbjct: 341 VKSRSDSVRTFGQPPAPPPPPPFAPTLPPPP-PPRRKPPSPSPPSSPLIENTSALRST 397
>01_02_0007 + 10132380-10133201
Length = 273
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = -2
Query: 488 PVTKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVF 312
P A P PQP +P P P PGQ + P ++ RTL P +++
Sbjct: 202 PDPNAPPQPLPQPDPNSPPQPLPQPDPNTPPGQQINAKISSQPDSIGGARTLYPYGVIY 260
>12_02_0063 + 13098519-13099585,13099759-13099906
Length = 404
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 488 PVTKALPDSHPQPIRRAPTVPAAPIPPQARP 396
P +A P + P P R+ P + PPQ RP
Sbjct: 187 PAAQAAPQA-PAPPRQVPVITQQQAPPQKRP 216
>12_02_0058 + 13015401-13016654
Length = 417
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 455 QPIRRAPT-VPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFP 309
QP AP VPAAP PP+ P Q P + + PPL+ P
Sbjct: 171 QPQEPAPLPVPAAPAPPRQVPVVTQQAPPPPPPLVPVITQDAPPLKRPAP 220
>11_01_0385 + 2915532-2916482
Length = 316
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = -2
Query: 491 DPVTKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLR 321
D +++L + Q AP +PP P +P AV AV V PPL+
Sbjct: 35 DATSRSLLVTGGQAAAPAPVWSFGALPPLIEPAVVEPPTAVAPVHAVAVGEAPPPLK 91
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 470 PDSHPQPIRRAPTVPAAPIPPQARPGQAQP 381
P SHP PI P P P A +QP
Sbjct: 434 PPSHPTPITSVAPAPPPPPPAAAAAAASQP 463
>10_02_0157 -
5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -2
Query: 473 LPDSHPQPIRRAPTVPAAPI---PPQARPGQAQPLQAVLLPRAVQVHRTLPP 327
+P S P APTV A P+ PP A + PL + P A+ V LPP
Sbjct: 31 VPPSLPTTTPPAPTVVAPPLPTTPPPAVVAPSPPLPPLTPPPAI-VPPALPP 81
>10_01_0112 -
1386762-1386953,1387228-1387309,1387399-1387509,
1387590-1387841,1387927-1388348,1388430-1390160,
1390251-1390448
Length = 995
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Frame = -2
Query: 458 PQPIRRAPTVP----AAPIPPQARPGQAQPLQAVLL 363
PQP++ +PT P A P PP + P A+L+
Sbjct: 610 PQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALLI 645
>09_04_0430 + 17502387-17503505
Length = 372
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = -2
Query: 488 PVTKALPDSHPQPIR-RAPTVPAAP-IPPQARPGQAQPLQAVLLPRAVQVHRT--LPPLR 321
P+ + P PQP RA +P P PPQ+ P +A P A Q T PP+
Sbjct: 162 PMQQPQPQPPPQPTPPRAAPLPTPPRAPPQSTPPRAAPQSTPPQRVAPQPPATAAAPPIE 221
Query: 320 LVFP 309
V P
Sbjct: 222 PVAP 225
>09_01_0016 - 376742-376883,377973-378964
Length = 377
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 467 DSHPQPIRRAPTVPAAPIPPQARPGQ 390
DSH P ++AP V P PP P Q
Sbjct: 46 DSHGAPTKKAPFVAPPPPPPPPPPPQ 71
>07_01_0312 + 2214050-2214556
Length = 168
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Frame = -2
Query: 458 PQP-IRRAPTVPAAPIPPQAR--PGQAQPL--QAVLLPRAVQVHRTLPPL 324
P P + PTVPA P P A P A P AVL P TLPP+
Sbjct: 91 PMPAVPAVPTVPAVPAVPAASLPPMPAVPAVPNAVLPPMPAVPKVTLPPM 140
>06_03_1358 - 29548440-29549315
Length = 291
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 476 ALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPP 327
ALP S R+ ++PAAP+PP P ++ A P H T PP
Sbjct: 44 ALPSSLESRFRKLKSLPAAPLPPPP-PAKSLGRSATAPP-----HHTDPP 87
>03_06_0187 + 32209924-32210634
Length = 236
Score = 27.9 bits (59), Expect = 7.4
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Frame = -2
Query: 488 PVTKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVL----LPRAV-QVHRTL--P 330
P +P+ P PT+P P+PP PG P L +P A V TL P
Sbjct: 149 PTVPGVPELPVNPGGVVPTIPKVPLPP-VNPGAVVPAVPALPVPPIPGAAGGVVPTLPVP 207
Query: 329 PLRLVFPGV 303
PL V PGV
Sbjct: 208 PLPAV-PGV 215
>03_05_0781 +
27654764-27655429,27655902-27656004,27656535-27656590,
27656895-27657059,27657078-27657083,27657657-27657770,
27658170-27658262
Length = 400
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = -2
Query: 485 VTKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFPG 306
V L SHP RR PAA PP ++ LL + + P L L+ G
Sbjct: 52 VAPPLRASHPDTARRVSVSPAAVEPPPKPRALLDAIKRSLLDSLAALKK--PALALLLAG 109
Query: 305 VIIQA 291
++ A
Sbjct: 110 ALLAA 114
>03_05_0587 - 25878948-25879201,25879290-25879361,25881091-25881451
Length = 228
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = -2
Query: 473 LPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTL 333
LP P P ++ V A PP R G + LQA L V TL
Sbjct: 176 LPRGSPPPYAQSVPVGPAAAPPPPRSGASSSLQAPLAATTTIVAITL 222
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 488 PVTKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPP 327
P +KALP+S P P P PPQ + Q+ +LP + ++ + P
Sbjct: 1216 PHSKALPESSPD---NQDIEPECPSPPQIPESKELSRQSKILPESSPGNQDIEP 1266
>02_02_0338 + 9105725-9106581,9106950-9107091
Length = 332
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2
Query: 488 PVTKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQ 375
P T A P P R P P PP A P QA+PL+
Sbjct: 16 PATAAQPAPAPATARTTP--PLKKPPPLAPPTQARPLK 51
>02_01_0597 -
4433105-4433467,4433671-4433860,4434569-4434786,
4434882-4436556,4437137-4438113
Length = 1140
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 473 LPDSHPQPIRRAPTVPAAPIPPQARPGQAQPL 378
L D P+P + +P IPP RP + PL
Sbjct: 101 LHDGAPRPAPESIEIPQPSIPPPPRPQDSPPL 132
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = -2
Query: 488 PVTKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFP 309
P+ L S P P P +P +PP P P +VL P P RLV P
Sbjct: 593 PLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPP 652
>08_02_1012 + 23550314-23551504
Length = 396
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 488 PVTKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQA 372
P ++ + P P+ AP V +A P ARP + +P +A
Sbjct: 165 PQPRSPRPASPPPVPAAPEVASAVSTPPARPKRGRPPRA 203
>08_01_0005 +
47929-48201,48663-48788,49009-49054,49188-49270,
49651-49728,49831-49884,50004-50138,50222-51691
Length = 754
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 440 APTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFP 309
AP +P++ PP A P + PLQ + + PPL + P
Sbjct: 321 APPIPSSEPPPSALPNNSFPLQPPGGSLSTLSYTGPPPLMNIMP 364
>07_01_0862 - 7172083-7172931
Length = 282
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -2
Query: 488 PVTKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRL 318
P KA+ P P R+ P + P+PP+ +P P P + + LPPL L
Sbjct: 152 PRKKAMLFPLPLPPRKKPLLYPPPLPPKKKP-LPPPSPPPQPPLPEKENTPLPPLLL 207
>06_01_1113 -
9164953-9165044,9166453-9166586,9166624-9166734,
9166815-9167066,9167152-9168186,9168313-9169187,
9169476-9169673
Length = 898
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 458 PQPIRRAPTVPAAPIPPQARPG-QAQP 381
PQP++ +PT PA P A P QA P
Sbjct: 502 PQPVQASPTSPAKQHAPPAPPSVQASP 528
>06_01_1069 +
8731567-8731632,8732120-8732281,8733028-8733081,
8733557-8733630,8733706-8733786,8734902-8735079,
8735336-8735506,8736113-8736202,8736284-8736331,
8736447-8736562,8736655-8736733,8737101-8737223
Length = 413
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 488 PVTKALPDSHPQPIRRAPTVPAAPIPPQARPGQAQPLQAVLLPRA 354
PV+++ P + + R P A + P+ P AQP A P A
Sbjct: 91 PVSQSQPATPVASVARTPPPQAPVVTPEPAPPSAQPPVASATPAA 135
>06_01_0501 -
3587390-3587528,3587922-3588031,3588122-3588187,
3588293-3588410,3588499-3588554,3588647-3588766,
3588937-3589035,3589443-3589490,3589534-3589545,
3590353-3590418,3591412-3591471,3592061-3592162,
3592405-3592426,3592959-3593041,3593166-3593293,
3593775-3593881,3594376-3594845
Length = 601
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 473 LPDSHPQPIRRAPTVPAAP-IPPQARPGQAQPLQA 372
L S P P RAP +P+ P +PP P A P ++
Sbjct: 34 LSASDPSPTTRAPLLPSPPRLPPLLVPFAAVPARS 68
>04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355
Length = 1109
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -3
Query: 478 KRYRTVIHNR*DEHRQCQQHRFHLKHVRGKHNHFRQ 371
+R+R H +H+ + H H H R +H+H Q
Sbjct: 119 RRWRPRDHRDQHDHQSQRHHHRHHHHQRQRHHHHHQ 154
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,798,990
Number of Sequences: 37544
Number of extensions: 317117
Number of successful extensions: 1556
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1513
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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