Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0759.Seq
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 81 6e-16
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 81 6e-16
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 79 2e-15
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 79 2e-15
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 79 2e-15
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 77 7e-15
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 39 0.003
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 38 0.004
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 38 0.007
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 38 0.007
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 38 0.007
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 37 0.009
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 37 0.009
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 37 0.009
U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical pr... 36 0.017
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 36 0.022
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 35 0.038
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 35 0.038
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 35 0.038
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 35 0.038
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 35 0.038
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 32 0.27
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 32 0.36
U43283-3|AAC69024.2| 880|Caenorhabditis elegans Hypothetical pr... 32 0.36
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 32 0.36
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 32 0.36
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.47
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 31 0.47
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 31 0.47
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 31 0.47
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 31 0.62
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 31 0.62
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 31 0.62
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 31 0.62
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 31 0.62
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 31 0.62
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 31 0.82
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.82
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 30 1.1
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr... 30 1.4
U53153-2|AAQ91899.1| 422|Caenorhabditis elegans Hypothetical pr... 30 1.4
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 29 1.9
AF039053-6|AAC25874.2| 287|Caenorhabditis elegans Serpentine re... 29 1.9
AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical ... 29 1.9
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 29 1.9
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 29 2.5
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 29 2.5
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 29 2.5
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 29 2.5
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 29 2.5
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 29 2.5
Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical p... 29 3.3
Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.3
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 29 3.3
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 29 3.3
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 29 3.3
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 29 3.3
AC024790-4|AAF60636.1| 121|Caenorhabditis elegans Hypothetical ... 29 3.3
Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 28 4.4
U13876-13|AAA21172.3| 370|Caenorhabditis elegans Prion-like-(q/... 28 4.4
AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical... 28 4.4
Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical p... 28 5.8
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 28 5.8
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 5.8
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 5.8
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 5.8
U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe chro... 28 5.8
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 28 5.8
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 28 5.8
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 28 5.8
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 28 5.8
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z67738-5|CAA91547.1| 484|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z67735-4|CAA91533.1| 484|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 27 7.7
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 27 7.7
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 27 7.7
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 27 7.7
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 27 7.7
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 27 7.7
AF039053-7|AAC25873.3| 295|Caenorhabditis elegans Serpentine re... 27 7.7
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 27 7.7
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 81.0 bits (191), Expect = 6e-16
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 138
KGFGFVCF PEEAT AVT+MN +++G KPLYVALAQRKEDR+A L
Sbjct: 383 KGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVALAQRKEDRRAQL 428
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIV-GTK-PLYVALAQRKEDRKAHL 138
KGFGFV F+ + A +AV ++N I+ GT L V AQ+K +R A L
Sbjct: 278 KGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAEL 325
Score = 35.9 bits (79), Expect = 0.022
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 138
KG+GFV F + A A+ ++NG ++ K +YV Q + R L
Sbjct: 185 KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKEL 230
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 81.0 bits (191), Expect = 6e-16
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 138
KGFGFVCF PEEAT AVT+MN +++G KPLYVALAQRKEDR+A L
Sbjct: 383 KGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVALAQRKEDRRAQL 428
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIV-GTK-PLYVALAQRKEDRKAHL 138
KGFGFV F+ + A +AV ++N I+ GT L V AQ+K +R A L
Sbjct: 278 KGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAEL 325
Score = 35.9 bits (79), Expect = 0.022
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 138
KG+GFV F + A A+ ++NG ++ K +YV Q + R L
Sbjct: 185 KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKEL 230
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 79.0 bits (186), Expect = 2e-15
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 138
KGFGFVCF PEEAT AVTEMN ++V +KPLYVA+AQRKEDR+A L
Sbjct: 297 KGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQL 342
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALAQRKEDRKAHL 138
KGFGFV F++PEEA AV + + I GT L+V AQ+K +R A L
Sbjct: 192 KGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAEL 239
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 79.0 bits (186), Expect = 2e-15
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 138
KGFGFVCF PEEAT AVTEMN ++V +KPLYVA+AQRKEDR+A L
Sbjct: 294 KGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQL 339
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALAQRKEDRKAHL 138
KGFGFV F++PEEA AV + + I GT L+V AQ+K +R A L
Sbjct: 189 KGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAEL 236
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 138
KG+GFV F + E A A+ ++NG ++ K ++V Q + R L
Sbjct: 97 KGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNREL 142
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 79.0 bits (186), Expect = 2e-15
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 138
KGFGFVCF PEEAT AVTEMN ++V +KPLYVA+AQRKEDR+A L
Sbjct: 357 KGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQL 402
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALAQRKEDRKAHL 138
KGFGFV F++PEEA AV + + I GT L+V AQ+K +R A L
Sbjct: 252 KGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAEL 299
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 138
KG+GFV F + E A A+ ++NG ++ K ++V Q + R L
Sbjct: 160 KGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNREL 205
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 77.4 bits (182), Expect = 7e-15
Identities = 34/46 (73%), Positives = 39/46 (84%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 138
KGFGFVCF PEEAT AVTEMN ++V +KPLYVA+ QRKEDR+A L
Sbjct: 357 KGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIGQRKEDRRAQL 402
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALAQRKEDRKAHL 138
KGFGFV F++PEEA AV + + I GT L+V AQ+K +R A L
Sbjct: 252 KGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAEL 299
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKAHL 138
KG+GFV F + E A A+ ++NG ++ K ++V Q + R L
Sbjct: 160 KGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNREL 205
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 120
KG+GFV F E+ +A+ EM+G+ VG +P+ + + KE
Sbjct: 244 KGYGFVSFRDSEDYVRAMREMDGKYVGNRPIKLRKSAWKE 283
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 123
KG+GFV + E+A +A+ EMNG +G + + A RK D
Sbjct: 173 KGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPD 213
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 117
KG+GFV + EEA +A+ +MNG+ +G + + A RK
Sbjct: 63 KGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 101
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVG 81
+G+ FV F + + A KA+ +MN + VG
Sbjct: 162 QGYAFVKFDNKDAAAKAIVQMNNQDVG 188
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 117
KG+GFV + EEA +A+ +MNG+ +G + + A RK
Sbjct: 73 KGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 111
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVG 81
+G+ FV F + + A KA+ +MN + VG
Sbjct: 172 QGYAFVKFDNKDAAAKAIVQMNNQDVG 198
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 117
KG+GFV + EEA +A+ +MNG+ +G + + A RK
Sbjct: 176 KGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 214
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVG 81
+G+ FV F + + A KA+ +MN + VG
Sbjct: 275 QGYAFVKFDNKDAAAKAIVQMNNQDVG 301
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 117
KG+GFV + EEA +A+ +MNG+ +G + + A RK
Sbjct: 144 KGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 182
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVG 81
+G+ FV F + + A KA+ +MN + VG
Sbjct: 243 QGYAFVKFDNKDAAAKAIVQMNNQDVG 269
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA-QRKEDRKA 132
KGFGFV +P++A +A E NG + + + V LA QR ++KA
Sbjct: 21 KGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKKA 65
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA-QRKEDRKA 132
KGFGFV +P++A +A E NG + + + V LA QR ++KA
Sbjct: 139 KGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKKA 183
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA-QRKEDRKA 132
KGFGFV +P++A +A E NG + + + V LA QR ++KA
Sbjct: 139 KGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKKA 183
>U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical
protein F20B6.5 protein.
Length = 317
Score = 36.3 bits (80), Expect = 0.017
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 264 AQMTQIR--PTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRT 413
+QM+ +R P TPR N Q VRPS A QP YR + P+QS R+
Sbjct: 111 SQMSGVRAPPVTPR-NRQRSVRPSGSNAQPSGRAQPDYRDTRQRPSQSRDRS 161
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 35.9 bits (79), Expect = 0.022
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK--EDRKAHLT 141
KG+GFV F + + A A+ MNG+ +G + + A RK E+ + LT
Sbjct: 176 KGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLT 224
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 35.1 bits (77), Expect = 0.038
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 105
K FGFV + + + AT A++ MNG +G+K L V L
Sbjct: 376 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 410
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 35.1 bits (77), Expect = 0.038
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 105
K FGFV + + + AT A++ MNG +G+K L V L
Sbjct: 540 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 574
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 35.1 bits (77), Expect = 0.038
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 105
K FGFV + + + AT A++ MNG +G+K L V L
Sbjct: 540 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 574
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 35.1 bits (77), Expect = 0.038
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 105
K FGFV + + + AT A++ MNG +G+K L V L
Sbjct: 469 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 503
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 35.1 bits (77), Expect = 0.038
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 105
K FGFV + + + AT A++ MNG +G+K L V L
Sbjct: 540 KCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 574
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 464 CIYSSTFSISKQSPSNYKYTPNMRNPPAPQPAVHIQGQG 580
CI+ S +I+ ++ KYT M +P Q VH QG G
Sbjct: 6 CIFLSFLAIAAYGQAHLKYTKEMNDPEYVQQNVHHQGHG 44
>Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical
protein F55H12.1 protein.
Length = 768
Score = 32.7 bits (71), Expect = 0.20
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +3
Query: 228 TIAPSS--TTLYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQS 401
TIAPS+ TT+ P T + PTT + PP +T++ S + QS
Sbjct: 10 TIAPSTMKTTVAPPTMRTTMAPTTMKTTVAPPTMKTTRSPSTMKTTKEPSMTQTTKTVQS 69
Query: 402 TI 407
TI
Sbjct: 70 TI 71
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 32.3 bits (70), Expect = 0.27
Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Frame = +3
Query: 246 TTLYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRT---- 413
T P + Q P P AQ P+ AA QP +APAQ ++
Sbjct: 99 TVQQAPILVAQAPPNPPAPQAQQHQAPAPPAARQIPVQQPPKPVVQQAPAQQAPKSVAQA 158
Query: 414 -SLGARPITGQ---QGVAAAAASIRPPLVSQSSRP 506
A+PI Q Q V A + +PP+V Q+ P
Sbjct: 159 PPAQAKPIVQQAQAQPVVQKAPTQQPPVVQQTPPP 193
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = +3
Query: 261 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITG 440
P Q P++ + PP +P+ Q A P P+P PAQ A+P+T
Sbjct: 382 PMPAVQQAPSSQQATQAPP-KPAPQQAPPVQQNPPKPTPSPAPPAQK-------AQPVTQ 433
Query: 441 QQGVAAAAASIRP 479
QQ A + P
Sbjct: 434 QQASAPPTSPSAP 446
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 32.3 bits (70), Expect = 0.27
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 114
+GF F+ F+ A +AV +MNG +PL V LA +
Sbjct: 46 RGFAFIEFAEEGSAQRAVEQMNGAEFNGRPLRVNLANK 83
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ-RKEDR 126
K FGFV + + + A+T MNG +G K L V L + R E R
Sbjct: 470 KCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRNESR 512
>U43283-3|AAC69024.2| 880|Caenorhabditis elegans Hypothetical
protein T25G12.6 protein.
Length = 880
Score = 31.9 bits (69), Expect = 0.36
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +3
Query: 225 CTIAPSST--TLYGPAQMTQIRPTTPRWNAQ--PPVRPSTQAASAYANMQPTYRPAPRAP 392
C ST T GP+ T PTTP + P P T S + + T P P
Sbjct: 194 CRSVSDSTLITTSGPSGTTVTVPTTPCASVPTGPTKTPVTVPTSTGSVSRETKSPVTANP 253
Query: 393 AQSTIRTSLGARPIT 437
ST+ TSL ++P+T
Sbjct: 254 G-STVSTSLSSKPVT 267
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 31.9 bits (69), Expect = 0.36
Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Frame = +3
Query: 237 PSSTTLYGPAQMTQIRPTT--PRWNAQPPVRPSTQAA----SAYANMQPTYRPAPRAPAQ 398
PS+ P + RPTT N PPV PS + + P P RA
Sbjct: 76 PSAMRAPPPQPTYENRPTTGMSMRNGGPPVPPSRSGMIPVPPSRSGGPPAPMPVSRAGGP 135
Query: 399 STIRTSLGARPITGQQGVAAAAASIRP 479
TS+G RP+TG A +RP
Sbjct: 136 PRAPTSMGGRPMTGM--ARPPTAGLRP 160
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ-RKEDR 126
K FGFV + + + A+T MNG +G K L V L + R E R
Sbjct: 470 KCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRNESR 512
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 120
KGF +V F + ++ A++ +NG G + L V AQ+++
Sbjct: 53 KGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQRD 92
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 31.5 bits (68), Expect = 0.47
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 228 TIAPSSTTLYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPA 380
T +P+S + Y P+ Q PT+P + P +P T A Y+ PTY P+
Sbjct: 1784 TYSPTSPS-YTPSS-PQYSPTSPTYTPSPSEQPGTSA--QYSPTSPTYSPS 1830
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +3
Query: 228 TIAPSSTTLYGPAQ-----MTQIRPTTPRWNAQPPVRPS-TQAASAYANMQPTYRPAP 383
T PSS T Y P Q PT+P ++ P PS T ++ Y+ PTY P+P
Sbjct: 1757 TYTPSSPT-YNPTSPRGFSSPQYSPTSPTYS---PTSPSYTPSSPQYSPTSPTYTPSP 1810
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 31.5 bits (68), Expect = 0.47
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 228 TIAPSSTTLYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPA 380
T +P+S + Y P+ Q PT+P + P +P T A Y+ PTY P+
Sbjct: 1791 TYSPTSPS-YTPSS-PQYSPTSPTYTPSPSEQPGTSA--QYSPTSPTYSPS 1837
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +3
Query: 228 TIAPSSTTLYGPAQ-----MTQIRPTTPRWNAQPPVRPS-TQAASAYANMQPTYRPAP 383
T PSS T Y P Q PT+P ++ P PS T ++ Y+ PTY P+P
Sbjct: 1764 TYTPSSPT-YNPTSPRGFSSPQYSPTSPTYS---PTSPSYTPSSPQYSPTSPTYTPSP 1817
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 31.5 bits (68), Expect = 0.47
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 351 ANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLVSQSSRP 506
A P PA A Q + A P G QG AAA A+ PP + ++ P
Sbjct: 329 AGAAPEAAPAAAAAPQPAPAPAAAAAPAGGYQGGAAAGAAAPPPAPAAAAAP 380
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 31.1 bits (67), Expect = 0.62
Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 2/91 (2%)
Frame = +3
Query: 240 SSTTLYGPA--QMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRT 413
++TT P ++T R TTP P PS A + T RAP +
Sbjct: 281 TTTTTAAPTTPRLTTARATTPLATTSRPTTPSPTTPRATTPLATTPLATTRAPLPPSPPP 340
Query: 414 SLGARPITGQQGVAAAAASIRPPLVSQSSRP 506
RP+T A + RP + P
Sbjct: 341 RTSKRPVTQAPTTPRATTTRRPTTTTPRPTP 371
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRK 129
KGFGFV P++A +A E++G ++ + + V A + K
Sbjct: 192 KGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCATARVHSK 234
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 31.1 bits (67), Expect = 0.62
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 111
KGFGFV F +A A+ +G++V + L V LA+
Sbjct: 60 KGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAK 96
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 31.1 bits (67), Expect = 0.62
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 111
KGFGFV F +A A+ +G++V + L V LA+
Sbjct: 60 KGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAK 96
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRK 129
KGFGFV P++A +A E++G ++ + + V A + K
Sbjct: 192 KGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCATARVHSK 234
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 31.1 bits (67), Expect = 0.62
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = +3
Query: 231 IAPSSTTLYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIR 410
IAPS+T +Q T+ PTT R PP+ P T Y + T +P P S+I
Sbjct: 1444 IAPSTTG--HQSQQTRPTPTTHRPGITPPLAPKT----IYPSSLQTGSSSPTPPGTSSII 1497
Query: 411 TSLGAR 428
G+R
Sbjct: 1498 VVAGSR 1503
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 30.7 bits (66), Expect = 0.82
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = +3
Query: 258 GPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARP 431
GPA+ T R TP P R + +A A+ PT P P A + R + P
Sbjct: 332 GPARPTTTRSATPATRTAVPPRATAPPKAAPASKAPTRAPIPARSAPAPPRGAPAKAP 389
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 123
KG+GFV F SP+ A AV +N G + L Q+++D
Sbjct: 148 KGYGFVDFESPQAAAAAVDGLNTE--GVQAQMAKLQQQEQD 186
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 123
KG+GFV F SP+ A AV +N G + L Q+++D
Sbjct: 122 KGYGFVDFESPQAAAAAVDGLNTE--GVQAQMAKLQQQEQD 160
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 0.82
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDR 126
KGF F+ F+S E + A+ MNG+ + + + V+ A +++ +
Sbjct: 142 KGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSK 183
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 30.7 bits (66), Expect = 0.82
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 4 GFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDR 126
G+GFV + E+A +AV+ NG + K + V+ A+ D+
Sbjct: 84 GYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYARPSNDQ 124
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRI 75
KG GFV F +EA A+ +NG I
Sbjct: 169 KGVGFVRFDKKDEADVAIKTLNGSI 193
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 0.82
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDR 126
KGF F+ F+S E + A+ MNG+ + + + V+ A +++ +
Sbjct: 152 KGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSK 193
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 4 GFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 111
G+GFV F + A K + EM+G+ + K + V+ A+
Sbjct: 131 GYGFVLFDTRANAQKKIVEMDGKTLNGKLISVSWAR 166
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical protein
T01G1.3 protein.
Length = 1083
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 279 IRPTTPRWNAQPP--VRPSTQAASAYANMQPTYRPAPRAPAQSTIRT 413
+ P TP WN PP ++P+T A M+ ++P A A + T
Sbjct: 870 VAPVTPGWNDPPPMALKPTTVAQPKQNVMEINWKPIETAQAPGGMMT 916
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical protein
T01G1.3 protein.
Length = 1083
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 279 IRPTTPRWNAQPP--VRPSTQAASAYANMQPTYRPAPRAPAQSTIRT 413
+ P TP WN PP ++P+T A M+ ++P A A + T
Sbjct: 870 VAPVTPGWNDPPPMALKPTTVAQPKQNVMEINWKPIETAQAPGGMMT 916
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 29.9 bits (64), Expect = 1.4
Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Frame = +3
Query: 234 APSSTTLYGPAQMTQIRPTTPRWNA---QPPVRPSTQAASAYANMQPTYRPAPRAPAQST 404
AP Y P Q T P QPP R ST A A PA RAP +T
Sbjct: 266 APGKDANYCPCPQRQDDRTPPSSGTSAPQPPPRGSTAAPGTRAPPATRAPPATRAPPATT 325
Query: 405 IRTSLGARPITGQQ 446
RP Q
Sbjct: 326 RAPPATTRPAPASQ 339
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMN 66
KGF FV F S ++A +A+ E+N
Sbjct: 217 KGFAFVTFESRDDAARAIAELN 238
>Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical protein
ZK512.5 protein.
Length = 1232
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
Frame = +3
Query: 300 WNAQPPVRPSTQAASAYANMQPTYRPAPR-----APAQSTIRTSLGARPITGQQGVAAAA 464
W+ PP T A N+QP+Y PAP AP+ T ++ + P+ Q + A+
Sbjct: 996 WDTSPPSN-QTSYPPAPRNIQPSYSPAPNFANPTAPSVPTPPPAVSSAPVLQQATLGQAS 1054
Query: 465 ---ASIRPPLVSQSSRPAIIN 518
A P V Q +N
Sbjct: 1055 IPNAKTTAPPVPQKQPELALN 1075
>U53153-2|AAQ91899.1| 422|Caenorhabditis elegans Hypothetical
protein T19A5.3b protein.
Length = 422
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 228 TIAPSSTTLYGPAQMTQIRPTTPRWNAQPPVRPS 329
T+ P +TT+Y P RPTT + PV S
Sbjct: 218 TLPPETTTIYVPPTTASRRPTTTTTTTEAPVEAS 251
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 228 TIAPSSTTLYGPAQMTQIRPTTPRWNAQPPVRPS 329
T+ P +TT+Y P RPTT + PV S
Sbjct: 286 TLPPETTTIYVPPTTASRRPTTTTTTTEAPVEAS 319
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +3
Query: 234 APSSTTLYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRT 413
AP++TT P + T TP PP A++ PTY P +QST
Sbjct: 626 APTTTTTSKPVESTTTEEDTPEH--VPPAIVHMTASTPSGKNPPTYIPLHPETSQSTPTP 683
Query: 414 SLGAR 428
+ AR
Sbjct: 684 TTSAR 688
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 237 PSSTTLYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTS 416
P++TT P +T T+P+ P ST ++ T +PA P +STI ++
Sbjct: 406 PTTTTTKSPVVITTTTKTSPKPTTSPSTTTSTTTSTTIPPSTTTRKPA--NPRRSTIMSA 463
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 29.5 bits (63), Expect = 1.9
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Frame = +3
Query: 279 IRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAP-------AQSTIRTSLGARPIT 437
IRP TP AQPP+ S + P+ P P P + IR S+ P+T
Sbjct: 1693 IRPITP---AQPPITQSPVPSEPVVVRTPSPVPQPTPPPPPPPVREEWVIRDSVERDPVT 1749
Query: 438 GQQGVAAAAASIRPPLVSQSSRPAII 515
QG + + PLV Q RP ++
Sbjct: 1750 --QG-RIRGSFRKEPLVPQPPRPPVV 1772
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +3
Query: 255 YGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPI 434
YGP Q + P + +P P ++ +S+Y P + PA PA + + +PI
Sbjct: 84 YGPPQPSYSPPKSSYGRPEPTYSPYSRPSSSYGR-PPQFYPAQPGPAVPAVIPPVVTQPI 142
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = +3
Query: 309 QPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLV 488
QPPV ++ AA+AY + P P P P T + +G R G G+ I PP+
Sbjct: 185 QPPVMTASAAAAAYRDRLPPPPPKPPMPDLRT-KEPIGIRSWNG-SGI--PPPPILPPVA 240
Query: 489 SQSS 500
SS
Sbjct: 241 CLSS 244
>AF039053-6|AAC25874.2| 287|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 21 protein.
Length = 287
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/43 (23%), Positives = 22/43 (51%)
Frame = +2
Query: 167 VCACSKWAKYSSLVVQVDFLYHRSLQHHVIWTSSNDSNKTYNS 295
+C+ WA ++++ FL+ L ++W + NK +N+
Sbjct: 162 LCSSQYWATSKTVIIAFTFLFAIMLSLKLLWKVIKEKNKDFNN 204
>AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical
protein T22B11.4a protein.
Length = 553
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 461 CCIYSSTFSISKQSPSNYKYTPNMRNPPAPQPAV 562
CCIY + SK+S ++ Y NPP P V
Sbjct: 511 CCIYKNKCCKSKESKTSNGYRYTSANPPPPTELV 544
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = +3
Query: 261 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITG 440
P Q+ Q+ TP+ Q P +P+ Q ++ P +AP + R S + +
Sbjct: 529 PQQVQQVHQQTPQQQVQQPHQPNQQ-----PHIPSQQLPRQQAPQPAQNRPSAAQQVVFQ 583
Query: 441 QQGVAAAAASIRP 479
Q V A A RP
Sbjct: 584 QGSVQATTAPQRP 596
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 303 NAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGA 425
N +PP P + A A ++P RPAP P + + L A
Sbjct: 721 NEEPPKPPRKKKPIAEAPLRPPARPAPIVPTSAGLSLVLAA 761
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 285 PTTPRWNA-QPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLG-ARPITGQQGVAA 458
P PR A +P RP+T +A +P PA AP T R G +RP T + A
Sbjct: 231 PAVPRPVAGKPSARPATTTGTATRPTRPAV-PAASAPRALTSRAPAGPSRPTTTRNAAPA 289
Query: 459 AAASI 473
++
Sbjct: 290 PRTAV 294
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +3
Query: 282 RPTTPRWNAQPPVRPSTQAAS---AYANMQPT--YRPAPRAPAQSTIRTSLGARPITGQQ 446
RP T A P RP+ AAS A + P RP A RT++ +R +
Sbjct: 244 RPATTTGTATRPTRPAVPAASAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRATVLTK 303
Query: 447 GVAAAAASIRPPLVSQSS 500
A+ A R P+ ++S+
Sbjct: 304 TAPASKAPTRAPVPARSA 321
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 285 PTTPRWNA-QPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLG-ARPITGQQGVAA 458
P PR A +P RP+T +A +P PA AP T R G +RP T + A
Sbjct: 231 PAVPRPVAGKPSARPATTTGTATRPTRPAV-PAASAPRALTSRAPAGPSRPTTTRNAAPA 289
Query: 459 AAASI 473
++
Sbjct: 290 PRTAV 294
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +3
Query: 282 RPTTPRWNAQPPVRPSTQAAS---AYANMQPT--YRPAPRAPAQSTIRTSLGARPITGQQ 446
RP T A P RP+ AAS A + P RP A RT++ +R +
Sbjct: 244 RPATTTGTATRPTRPAVPAASAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRATVLTK 303
Query: 447 GVAAAAASIRPPLVSQSS 500
A+ A R P+ ++S+
Sbjct: 304 TAPASKAPTRAPVPARSA 321
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 285 PTTPRWNA-QPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLG-ARPITGQQGVAA 458
P PR A +P RP+T +A +P PA AP T R G +RP T + A
Sbjct: 231 PAVPRPVAGKPSARPATTTGTATRPTRPAV-PAASAPRALTSRAPAGPSRPTTTRNAAPA 289
Query: 459 AAASI 473
++
Sbjct: 290 PRTAV 294
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +3
Query: 282 RPTTPRWNAQPPVRPSTQAAS---AYANMQPT--YRPAPRAPAQSTIRTSLGARPITGQQ 446
RP T A P RP+ AAS A + P RP A RT++ +R +
Sbjct: 244 RPATTTGTATRPTRPAVPAASAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRATVLTK 303
Query: 447 GVAAAAASIRPPLVSQSS 500
A+ A R P+ ++S+
Sbjct: 304 TAPASKAPTRAPVPARSA 321
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 123
+GF FV F+ A +AV + NG + L V LAQ + +
Sbjct: 45 RGFAFVEFTEEAAAQRAVDQFNGVDFNGRALRVNLAQNRNN 85
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDR 126
KG+ F + P +A+ +NG +G K L V LA + R
Sbjct: 331 KGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQR 372
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDR 126
KG+ F + P +A+ +NG +G K L V LA + R
Sbjct: 331 KGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQR 372
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDR 126
KG+ F + P +A+ +NG +G K L V LA + R
Sbjct: 306 KGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQR 347
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDR 126
KG+ F + P +A+ +NG +G K L V LA + R
Sbjct: 309 KGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQR 350
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +3
Query: 237 PSSTTLYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQP-TYRPAPRAPAQSTIRT 413
P++ T + T PTTP P P+T ++ P T + P P T
Sbjct: 260 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMK 319
Query: 414 SLGARPIT 437
S P T
Sbjct: 320 STPTTPTT 327
>Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 372 RPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLVSQSS 500
+P+P APA + +R A+P Q A+A +RPP+ Q+S
Sbjct: 243 KPSPFAPAIAPLRDGAPAQPPAPIQ----ASAPLRPPVAKQNS 281
>Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 372 RPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLVSQSS 500
+P+P APA + +R A+P Q A+A +RPP+ Q+S
Sbjct: 243 KPSPFAPAIAPLRDGAPAQPPAPIQ----ASAPLRPPVAKQNS 281
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 4 GFGFVCFSSPEEATKAVTEMNGRIVG 81
GFGFV F +A AV ++NG+ +G
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKELG 62
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 4 GFGFVCFSSPEEATKAVTEMNGRIVG 81
GFGFV F +A AV ++NG+ +G
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKELG 62
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 4 GFGFVCFSSPEEATKAVTEMNGRIVG 81
GFGFV F +A AV ++NG+ +G
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKELG 62
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical
protein F57F4.4 protein.
Length = 2090
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 395 GRSSRCWSV-SGLHICICRCCLCARPYRGLCIPPWSCRSYLS 273
G S+ C SV G++ C C LC P RG P C S +S
Sbjct: 484 GISNSCGSVLGGVNACCCDNDLCIDPNRGSQRPQLRCYSGVS 525
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 395 GRSSRCWSV-SGLHICICRCCLCARPYRGLCIPPWSCRSYLS 273
G S+ C SV G++ C C LC P RG P C S +S
Sbjct: 484 GISNSCGSVLGGVNACCCDNDLCIDPNRGSQRPQLRCYSGVS 525
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 28.7 bits (61), Expect = 3.3
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +3
Query: 234 APSSTTLYGPAQMTQIRP-TTPRWNAQPPVRPSTQAASAYANMQP-TYRPAPRAPAQSTI 407
A + T PA+ +P TT R A P P T+ + ++ P P P A T
Sbjct: 19 ASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTC 78
Query: 408 RTSLGARPITGQQGVAAAAASIRP 479
A P+ VAAAAA+ P
Sbjct: 79 -----APPVRSASTVAAAAAAAPP 97
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 28.7 bits (61), Expect = 3.3
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +3
Query: 234 APSSTTLYGPAQMTQIRP-TTPRWNAQPPVRPSTQAASAYANMQP-TYRPAPRAPAQSTI 407
A + T PA+ +P TT R A P P T+ + ++ P P P A T
Sbjct: 148 ASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTC 207
Query: 408 RTSLGARPITGQQGVAAAAASIRP 479
A P+ VAAAAA+ P
Sbjct: 208 -----APPVRSASTVAAAAAAAPP 226
>AC024790-4|AAF60636.1| 121|Caenorhabditis elegans Hypothetical
protein Y47D7A.7 protein.
Length = 121
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 285 PTTPRWNAQPPVRPSTQAASAYANMQPT-YRPAPRAPAQSTIRTSLGARPITGQQ 446
P+TP ++AQPP PS +S N + T A A A S R AR +Q
Sbjct: 52 PSTPSYSAQPPPAPSAYTSS--DNQEDTESESATSASATSEYRKRAKARTAHNRQ 104
>Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/76 (28%), Positives = 29/76 (38%)
Frame = +3
Query: 285 PTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAA 464
P TP A PP P S A T P P P + P Q AAA
Sbjct: 335 PVTPASAAPPP--PGIPYNSVAAGRSTT-TPVPSTPISAN-----SPAPSLAQAAPIAAA 386
Query: 465 ASIRPPLVSQSSRPAI 512
+ + PP + +S+P +
Sbjct: 387 SPVFPPAAAAASKPVL 402
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 4 GFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 117
GFGFV F +A AV ++NG+ + + + + +RK
Sbjct: 36 GFGFVDFQDQRDADDAVHDLNGKELCGERVILEFPRRK 73
>U13876-13|AAA21172.3| 370|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 46
protein.
Length = 370
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
Frame = +3
Query: 267 QMTQIRPTTPRWNAQPPVRP---------STQAASAYANM-QPTYRPAPRAPAQSTIRTS 416
Q T IRP P+ + Q PV+ +A A A + QP RPA A A + + T
Sbjct: 124 QPTPIRPPQPQRSGQQPVQSFESHTQIVQPVRAVQANAQLVQPVIRPAASAVATAVVDTD 183
Query: 417 LGARPIT 437
A+ T
Sbjct: 184 SSAKKAT 190
>AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/76 (28%), Positives = 29/76 (38%)
Frame = +3
Query: 285 PTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAA 464
P TP A PP P S A T P P P + P Q AAA
Sbjct: 335 PVTPASAAPPP--PGIPYNSVAAGRSTT-TPVPSTPISAN-----SPAPSLAQAAPIAAA 386
Query: 465 ASIRPPLVSQSSRPAI 512
+ + PP + +S+P +
Sbjct: 387 SPVFPPAAAAASKPVL 402
>Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical
protein T06E4.10 protein.
Length = 180
Score = 27.9 bits (59), Expect = 5.8
Identities = 26/87 (29%), Positives = 35/87 (40%)
Frame = +3
Query: 255 YGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPI 434
+ PA + P A PV AA A+A P Y PAP A +L A I
Sbjct: 80 FAPAPVVAAAPALAPAYAPAPV---VAAAPAFA---PAYAPAPVASPMIAAAPALAAASI 133
Query: 435 TGQQGVAAAAASIRPPLVSQSSRPAII 515
G+ AAA P + ++ PA +
Sbjct: 134 ---NGLPVAAAPAFAPAFAPAAVPAAV 157
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 261 PAQMTQIRPT-TPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQ 398
PA PT TP + Q RP AA A+ Q Y P P+ +Q
Sbjct: 165 PAAQPPPAPTPTPSYQQQMAPRPQAPAAYPPASQQQGYPPQPQQNSQ 211
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +3
Query: 234 APSSTTLYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQS 401
AP+ L P++ + P P PP P+TQA +A P P P APA S
Sbjct: 826 APTFDYLNMPSESFGLAPVAP---PAPPPPPATQATAA-----PVTAPKPVAPAPS 873
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.9 bits (59), Expect = 5.8
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +3
Query: 228 TIAPSSTTLYGPAQMTQIRPTTP----RWNAQPPVRPSTQAASAYANMQPTYRPAPRAPA 395
T ++TT TQ PTTP P RP TQ AS A QP P P
Sbjct: 688 TTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPAT-QPATTPTTTIPT 746
Query: 396 QSTIRTSLG-ARPI 434
+ +++ A P+
Sbjct: 747 TTQFSSAVSVALPV 760
Score = 27.5 bits (58), Expect = 7.7
Identities = 22/83 (26%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Frame = +3
Query: 228 TIAPSSTTLYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPR---APAQ 398
T+ P +TT P T TT P+T + + + PT RP + PA
Sbjct: 677 TVPPVTTTT--PTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPAT 734
Query: 399 STIRTSLGARPITGQQGVAAAAA 467
T P T Q A + A
Sbjct: 735 QPATTPTTTIPTTTQFSSAVSVA 757
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 5.8
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +3
Query: 228 TIAPSSTTLYGPAQMTQIRPTTP----RWNAQPPVRPSTQAASAYANMQPTYRPAPRAPA 395
T ++TT TQ PTTP P RP TQ AS A QP P P
Sbjct: 744 TTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPAT-QPATTPTTTIPT 802
Query: 396 QSTIRTSLG-ARPI 434
+ +++ A P+
Sbjct: 803 TTQFSSAVSVALPV 816
Score = 27.5 bits (58), Expect = 7.7
Identities = 22/83 (26%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Frame = +3
Query: 228 TIAPSSTTLYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPR---APAQ 398
T+ P +TT P T TT P+T + + + PT RP + PA
Sbjct: 733 TVPPVTTTT--PTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPAT 790
Query: 399 STIRTSLGARPITGQQGVAAAAA 467
T P T Q A + A
Sbjct: 791 QPATTPTTTIPTTTQFSSAVSVA 813
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 27.9 bits (59), Expect = 5.8
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +3
Query: 228 TIAPSSTTLYGPAQMTQIRPTTP----RWNAQPPVRPSTQAASAYANMQPTYRPAPRAPA 395
T ++TT TQ PTTP P RP TQ AS A QP P P
Sbjct: 567 TTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPAT-QPATTPTTTIPT 625
Query: 396 QSTIRTSLG-ARPI 434
+ +++ A P+
Sbjct: 626 TTQFSSAVSVALPV 639
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Frame = +3
Query: 243 STTLYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPT-YRPAPRAPAQSTIRTSL 419
+TT PA T PTT P P+ A + PT AP AP T T+
Sbjct: 495 TTTNTPPANPTTATPTTVGTIGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTA 554
Query: 420 GARP 431
P
Sbjct: 555 PTVP 558
Score = 27.5 bits (58), Expect = 7.7
Identities = 22/83 (26%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Frame = +3
Query: 228 TIAPSSTTLYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPR---APAQ 398
T+ P +TT P T TT P+T + + + PT RP + PA
Sbjct: 556 TVPPVTTTT--PTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPAT 613
Query: 399 STIRTSLGARPITGQQGVAAAAA 467
T P T Q A + A
Sbjct: 614 QPATTPTTTIPTTTQFSSAVSVA 636
>U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe
chromosome segregationprotein) homolog protein 1
protein.
Length = 307
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +3
Query: 231 IAPSSTTLYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYR 374
IAPSST GP++ T +P TPR+ + P P+ S + T R
Sbjct: 225 IAPSSTPA-GPSKPTARKPPTPRF--KKPSTPALAPQSDDTELSSTVR 269
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 306 AQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPP 482
A PP P AA+A A + P P P++PA + + P Q A+ +++I PP
Sbjct: 133 APPP--PPPPAAAAAAPISPKAAPTPQSPAPNRV-------PHYRQTSTASVSSTIPPP 182
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 99
K F FV + PE A A MNG+++G + L V
Sbjct: 143 KTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 99
K F FV + PE A A MNG+++G + L V
Sbjct: 143 KTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 99
K F FV + PE A A MNG+++G + L V
Sbjct: 143 KTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 309 QPPVRPSTQAASAYANMQPTYRPAPRA 389
QP V P+ + Y N+ PT PAP A
Sbjct: 373 QPTVAPTLPPSVTYQNVAPTAPPAPPA 399
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 309 QPPVRPSTQAASAYANMQPTYRPAPRA 389
QP V P+ + Y N+ PT PAP A
Sbjct: 373 QPTVAPTLPPSVTYQNVAPTAPPAPPA 399
>Z67738-5|CAA91547.1| 484|Caenorhabditis elegans Hypothetical
protein W03G11.4 protein.
Length = 484
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -3
Query: 305 IPPWSCRSYLSHLSWSI 255
IPP C SY SHLS SI
Sbjct: 450 IPPLCCSSYYSHLSISI 466
>Z67735-4|CAA91533.1| 484|Caenorhabditis elegans Hypothetical
protein W03G11.4 protein.
Length = 484
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -3
Query: 305 IPPWSCRSYLSHLSWSI 255
IPP C SY SHLS SI
Sbjct: 450 IPPLCCSSYYSHLSISI 466
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 120
+GFGFV F S E A K V E++ + K + AQ KE
Sbjct: 175 RGFGFVTFDSDEVADK-VCEIHFHEINGKMVECKKAQPKE 213
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Frame = +3
Query: 240 SSTTLYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPT-----YRPAPRAPAQST 404
+S++ P +P TP + QPP P++ +AS +++P + RAP+
Sbjct: 592 ASSSQAAPTSGANTQPATPSASNQPPT-PASASASTTLHVEPASVAGGSQAGSRAPSAG- 649
Query: 405 IRTSLGARPITGQQGVAAAAASIRPPLVSQSSRP 506
A P + A+AAA + S++S P
Sbjct: 650 --PGPSATPDSSTIPSASAAADAQTTTSSETSTP 681
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +3
Query: 228 TIAPSSTTLYGPAQMTQIRPTTPR-WNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQST 404
++ S L G + Q + P+ +A PPV ST AA+ + P+P +Q
Sbjct: 724 SVGGSERELGGRGLVQQQQQQQPQAQSAAPPVTVSTAAAATAERLVNATSPSPSVASQHL 783
Query: 405 I--RTSLGARPIT 437
+ TS P+T
Sbjct: 784 VPTETSTSVPPVT 796
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +3
Query: 228 TIAPSSTTLYGPAQMTQIRPTTPR-WNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQST 404
++ S L G + Q + P+ +A PPV ST AA+ + P+P +Q
Sbjct: 724 SVGGSERELGGRGLVQQQQQQQPQAQSAAPPVTVSTAAAATAERLVNATSPSPSVASQHL 783
Query: 405 I--RTSLGARPIT 437
+ TS P+T
Sbjct: 784 VPTETSTSVPPVT 796
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +3
Query: 228 TIAPSSTTLYGPAQMTQIRPTTPR-WNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQST 404
++ S L G + Q + P+ +A PPV ST AA+ + P+P +Q
Sbjct: 724 SVGGSERELGGRGLVQQQQQQQPQAQSAAPPVTVSTAAAATAERLVNATSPSPSVASQHL 783
Query: 405 I--RTSLGARPIT 437
+ TS P+T
Sbjct: 784 VPTETSTSVPPVT 796
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 111
+GFGFV F E+A A+ MN + K + V A+
Sbjct: 52 RGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFAR 88
>AF039053-7|AAC25873.3| 295|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 22 protein.
Length = 295
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = +2
Query: 167 VCACSKWAKYSSLVVQVDFLYHRSLQHHVIWTSSNDSNKTYN 292
+C+ WA S+++ + F + L ++W + NK N
Sbjct: 162 LCSSQYWATSKSVIIWLTFFFAIILSMKLLWKVIKEKNKDLN 203
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 1 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 120
+GFGFV F S E A K V E++ + K + AQ KE
Sbjct: 175 RGFGFVTFDSDEVADK-VCEIHFHEINGKMVECKKAQPKE 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,725,367
Number of Sequences: 27780
Number of extensions: 330563
Number of successful extensions: 1687
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1652
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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