Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0756.Seq
(598 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X55293-1|CAA39005.1| 169|Homo sapiens ultra high-sulphur kerati... 31 4.1
BC101744-1|AAI01745.2| 169|Homo sapiens keratin associated prot... 31 4.1
BC069531-1|AAH69531.1| 169|Homo sapiens keratin associated prot... 31 4.1
AJ006693-1|CAA07189.1| 169|Homo sapiens ultra high sulfer kerat... 31 4.1
AB126078-1|BAD20205.1| 169|Homo sapiens keratin associated prot... 31 4.1
BC113448-1|AAI13449.1| 99|Homo sapiens late cornified envelope... 30 5.4
BC113446-1|AAI13447.1| 99|Homo sapiens late cornified envelope... 30 5.4
BC069297-1|AAH69297.1| 105|Homo sapiens keratin associated prot... 30 5.4
BC069078-1|AAH69078.1| 105|Homo sapiens keratin associated prot... 30 5.4
AL139247-8|CAI21686.1| 99|Homo sapiens late cornified envelope... 30 5.4
AJ406952-1|CAC27591.1| 105|Homo sapiens keratin associated prot... 30 5.4
X63755-1|CAA45283.1| 169|Homo sapiens high-sulpher keratin prot... 30 7.2
AB076348-1|BAD01535.1| 255|Homo sapiens keratin associated prot... 30 7.2
BC101152-1|AAI01153.1| 177|Homo sapiens KRTAP1-3 protein protein. 29 9.5
AB081338-1|BAC15619.1| 177|Homo sapiens keratin associated prot... 29 9.5
>X55293-1|CAA39005.1| 169|Homo sapiens ultra high-sulphur keratin
protein protein.
Length = 169
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Frame = +2
Query: 305 CRRGCRTTAGSC---CGRTAASCRCCG--CSWAAFLAVAAISISPICSTFS 442
C GC ++ G C CG + CR CG C + P CS S
Sbjct: 6 CSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACSCSS 56
>BC101744-1|AAI01745.2| 169|Homo sapiens keratin associated protein
5-9 protein.
Length = 169
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Frame = +2
Query: 305 CRRGCRTTAGSC---CGRTAASCRCCG--CSWAAFLAVAAISISPICSTFS 442
C GC ++ G C CG + CR CG C + P CS S
Sbjct: 6 CSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACSCSS 56
>BC069531-1|AAH69531.1| 169|Homo sapiens keratin associated protein
5-9 protein.
Length = 169
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Frame = +2
Query: 305 CRRGCRTTAGSC---CGRTAASCRCCG--CSWAAFLAVAAISISPICSTFS 442
C GC ++ G C CG + CR CG C + P CS S
Sbjct: 6 CSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACSCSS 56
>AJ006693-1|CAA07189.1| 169|Homo sapiens ultra high sulfer keratin
protein.
Length = 169
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Frame = +2
Query: 305 CRRGCRTTAGSC---CGRTAASCRCCG--CSWAAFLAVAAISISPICSTFS 442
C GC ++ G C CG + CR CG C + P CS S
Sbjct: 6 CSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACSCSS 56
>AB126078-1|BAD20205.1| 169|Homo sapiens keratin associated protein
protein.
Length = 169
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Frame = +2
Query: 305 CRRGCRTTAGSC---CGRTAASCRCCG--CSWAAFLAVAAISISPICSTFS 442
C GC ++ G C CG + CR CG C + P CS S
Sbjct: 6 CSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACSCSS 56
>BC113448-1|AAI13449.1| 99|Homo sapiens late cornified envelope 4A
protein.
Length = 99
Score = 30.3 bits (65), Expect = 5.4
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2
Query: 305 CRRGCRTTAGSCCGRTAASCRCC 373
C C SCCG ++ C CC
Sbjct: 29 CASSCPPPISSCCGSSSGGCGCC 51
>BC113446-1|AAI13447.1| 99|Homo sapiens late cornified envelope 4A
protein.
Length = 99
Score = 30.3 bits (65), Expect = 5.4
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2
Query: 305 CRRGCRTTAGSCCGRTAASCRCC 373
C C SCCG ++ C CC
Sbjct: 29 CASSCPPPISSCCGSSSGGCGCC 51
>BC069297-1|AAH69297.1| 105|Homo sapiens keratin associated protein
17-1 protein.
Length = 105
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 305 CRRGCRTTAGSCCGRTAASCRCCGC 379
C+ GC GSCCG + C GC
Sbjct: 24 CQPGCCGCCGSCCGCGGSGCGGSGC 48
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +2
Query: 314 GCRTTAGSCCGRTAASCRCCGCSWAAFLAVAAISISPICST 436
GC G CCG + CCG + +PIC T
Sbjct: 67 GCGGCGGGCCGSSCCGSSCCG---SGCCGPVCCQPTPICDT 104
>BC069078-1|AAH69078.1| 105|Homo sapiens keratin associated protein
17-1 protein.
Length = 105
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 305 CRRGCRTTAGSCCGRTAASCRCCGC 379
C+ GC GSCCG + C GC
Sbjct: 24 CQPGCCGCCGSCCGCGGSGCGGSGC 48
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +2
Query: 314 GCRTTAGSCCGRTAASCRCCGCSWAAFLAVAAISISPICST 436
GC G CCG + CCG + +PIC T
Sbjct: 67 GCGGCGGGCCGSSCCGSSCCG---SGCCGPVCCQPTPICDT 104
>AL139247-8|CAI21686.1| 99|Homo sapiens late cornified envelope 4A
protein.
Length = 99
Score = 30.3 bits (65), Expect = 5.4
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2
Query: 305 CRRGCRTTAGSCCGRTAASCRCC 373
C C SCCG ++ C CC
Sbjct: 29 CASSCPPPISSCCGSSSGGCGCC 51
>AJ406952-1|CAC27591.1| 105|Homo sapiens keratin associated protein
16.1 protein.
Length = 105
Score = 30.3 bits (65), Expect = 5.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 305 CRRGCRTTAGSCCGRTAASCRCCGC 379
C+ GC GSCCG + C GC
Sbjct: 24 CQPGCCGCCGSCCGCGGSGCGGSGC 48
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +2
Query: 314 GCRTTAGSCCGRTAASCRCCGCSWAAFLAVAAISISPICST 436
GC G CCG + CCG + +PIC T
Sbjct: 67 GCGGCGGGCCGSSCCGSSCCG---SGCCGPVCCQPTPICDT 104
>X63755-1|CAA45283.1| 169|Homo sapiens high-sulpher keratin
protein.
Length = 169
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = +2
Query: 305 CRRGCRTTAGSC---CGRTAASCRCCGCSWAA 391
C GC ++ G C CG + CR CG S A
Sbjct: 6 CSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCA 37
>AB076348-1|BAD01535.1| 255|Homo sapiens keratin associated protein
protein.
Length = 255
Score = 29.9 bits (64), Expect = 7.2
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 299 TACRRGCRTTAG-SCCGRTAASCRCCGCSWAAFLAVAAISISPIC 430
+AC+ GC ++ SCC +++ CC S + P+C
Sbjct: 65 SACQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCKPVC 109
>BC101152-1|AAI01153.1| 177|Homo sapiens KRTAP1-3 protein protein.
Length = 177
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 284 GSVLSTACRRGCRTTAGSCCGRTAASCRCC--GCSWAAFLAVAAISISPICST 436
G+ S+ C+ C T SCC + CC C +F + S S CS+
Sbjct: 18 GTCGSSCCQPSCCET--SCCQPSCCETSCCQPSCCQTSFCGFPSFSTSGTCSS 68
>AB081338-1|BAC15619.1| 177|Homo sapiens keratin associated protein
1.8 protein.
Length = 177
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 284 GSVLSTACRRGCRTTAGSCCGRTAASCRCC--GCSWAAFLAVAAISISPICST 436
G+ S+ C+ C T SCC + CC C +F + S S CS+
Sbjct: 18 GTCGSSCCQPSCCET--SCCQPSCCETSCCQPSCCQTSFCGFPSFSTSGTCSS 68
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,922,408
Number of Sequences: 237096
Number of extensions: 853106
Number of successful extensions: 2181
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2150
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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