Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0756.Seq
(598 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 1.7
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 1.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 1.7
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 2.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.3
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 3.0
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 4.0
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 5.3
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 5.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 5.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 5.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 5.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 5.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 5.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 5.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 5.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 5.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 5.3
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 104 CNVNYPCFYFNSVFYFPIKKCVAVICGSFNKR 9
CN NY Y+N + I V + CG+F R
Sbjct: 101 CN-NYKKLYYNINYIEQIPIPVPIYCGNFPPR 131
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 104 CNVNYPCFYFNSVFYFPIKKCVAVICGSFNKR 9
CN NY Y+N + I V + CG+F R
Sbjct: 101 CN-NYKKLYYNINYIEQIPIPVPIYCGNFPPR 131
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -3
Query: 101 NVNYPCFYFNSVFYFPIKKCVAVICGSFNKR 9
N NY Y+N + I V + CG+F R
Sbjct: 328 NNNYKPLYYNIINIEQIPVPVPIYCGNFPPR 358
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.3
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 104 CNVNYPCFYFNSVFYFPIKKCVAVICGSFNKR 9
CN NY Y+N + I V + CG+F R
Sbjct: 101 CN-NYRKLYYNINYIEQIPIPVPIYCGNFPPR 131
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 154 PYAFIFD*TKPFERYTL 104
PYA + D KP RYT+
Sbjct: 964 PYAALIDELKPATRYTI 980
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 154 PYAFIFD*TKPFERYTL 104
PYA + D KP RYT+
Sbjct: 960 PYAALIDELKPATRYTI 976
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 3.0
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -3
Query: 251 NTVHNFAYFIKLYTSMLH-EQI 189
NT+HN Y KLY ++++ EQI
Sbjct: 321 NTIHNNNYNKKLYYNIINIEQI 342
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -1
Query: 250 IQYTILLISLNYIRRCCTNKSSLN 179
I Y + ++ LN+ ++ T SS+N
Sbjct: 211 IYYNLTMVKLNWPKKRVTKMSSIN 234
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 95 NYPCFYFNSVFYFPIKKCVAVICGSFNKR 9
NY Y+N + I V V CG+F R
Sbjct: 105 NYNKLYYNINYIEQIPIPVPVYCGNFPPR 133
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 95 NYPCFYFNSVFYFPIKKCVAVICGSFNKR 9
NY Y+N + I V V CG+F R
Sbjct: 105 NYNKLYYNINYIEQIPIPVPVYCGNFPPR 133
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 95 NYPCFYFNSVFYFPIKKCVAVICGSFNKR 9
NY Y+N + I V V CG+F R
Sbjct: 105 NYNKLYYNINYIEQIPIPVPVYCGNFPPR 133
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 95 NYPCFYFNSVFYFPIKKCVAVICGSFNKR 9
NY Y+N + I V V CG+F R
Sbjct: 105 NYNKLYYNINYIEQIPIPVPVYCGNFPPR 133
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 95 NYPCFYFNSVFYFPIKKCVAVICGSFNKR 9
NY Y+N + I V V CG+F R
Sbjct: 105 NYNKLYYNINYIEQIPIPVPVYCGNFPPR 133
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 95 NYPCFYFNSVFYFPIKKCVAVICGSFNKR 9
NY Y+N + I V V CG+F R
Sbjct: 105 NYNKLYYNINYIEQIPIPVPVYCGNFPPR 133
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 95 NYPCFYFNSVFYFPIKKCVAVICGSFNKR 9
NY Y+N + I V V CG+F R
Sbjct: 105 NYNKLYYNINYIEQIPIPVPVYCGNFPPR 133
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 95 NYPCFYFNSVFYFPIKKCVAVICGSFNKR 9
NY Y+N + I V V CG+F R
Sbjct: 105 NYNKLYYNINYIEQIPIPVPVYCGNFPPR 133
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 95 NYPCFYFNSVFYFPIKKCVAVICGSFNKR 9
NY Y+N + I V V CG+F R
Sbjct: 105 NYNKLYYNINYIEQIPIPVPVYCGNFPPR 133
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 95 NYPCFYFNSVFYFPIKKCVAVICGSFNKR 9
NY Y+N + I V V CG+F R
Sbjct: 338 NYNKLYYNINYIEQIPIPVPVYCGNFPPR 366
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 95 NYPCFYFNSVFYFPIKKCVAVICGSFNKR 9
NY Y+N + I V V CG+F R
Sbjct: 338 NYNKLYYNINYIEQIPIPVPVYCGNFPPR 366
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,998
Number of Sequences: 438
Number of extensions: 1773
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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