Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0755.Seq
(548 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 123 2e-29
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 122 5e-29
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 107 1e-24
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 97 1e-21
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 93 2e-20
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 53 3e-08
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 51 1e-07
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 47 2e-06
SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces... 29 0.45
SPBC13G1.10c |mug81||ATP-dependent RNA helicase Slh1|Schizosacch... 27 2.4
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 3.2
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 3.2
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 26 3.2
SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces pom... 26 4.2
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 25 5.6
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 7.3
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 25 9.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 123 bits (296), Expect = 2e-29
Identities = 54/72 (75%), Positives = 63/72 (87%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDNRMVN 180
AIAYGLD+ GE NVLIFDLGGGTFDVS+LTIE+GIFEVK+T GDTHLGGEDFD+R+VN
Sbjct: 178 AIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVN 237
Query: 181 HFVQELRGNTKR 216
HF+QE + K+
Sbjct: 238 HFIQEFKRKNKK 249
Score = 122 bits (295), Expect = 3e-29
Identities = 59/71 (83%), Positives = 66/71 (92%)
Frame = +2
Query: 254 SACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 433
+ACERAKRTLSSS QASIEIDSLFEGIDFYTSITRARFEEL ADLFR TMEPVE+ LRD+
Sbjct: 263 TACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDS 322
Query: 434 KMDKAQIHDIV 466
K+DKA +++IV
Sbjct: 323 KVDKASVNEIV 333
Score = 29.5 bits (63), Expect = 0.34
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 198 KRKYKKDLATNKRALRRLR 254
KRK KKD+ N RA+RRLR
Sbjct: 244 KRKNKKDITGNARAVRRLR 262
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 466 LVGGXTRIPKVXKL 507
LVGG TRIP+V KL
Sbjct: 334 LVGGSTRIPRVQKL 347
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 122 bits (293), Expect = 5e-29
Identities = 58/71 (81%), Positives = 67/71 (94%)
Frame = +2
Query: 254 SACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 433
+ACERAKRTLSSS QASIEIDSL+EGIDFYTSITRARFEEL ADLFR+TMEPVEK LRD+
Sbjct: 263 TACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDS 322
Query: 434 KMDKAQIHDIV 466
K+DK+ +++IV
Sbjct: 323 KIDKSSVNEIV 333
Score = 118 bits (285), Expect = 4e-28
Identities = 53/72 (73%), Positives = 61/72 (84%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDNRMVN 180
AIAYGLD+ E NVLIFDLGGGTFDVS+LTIE+GIFEVK+T GDTHLGGEDFD+R+VN
Sbjct: 178 AIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVN 237
Query: 181 HFVQELRGNTKR 216
HF QE + K+
Sbjct: 238 HFAQEFKRKNKK 249
Score = 29.5 bits (63), Expect = 0.34
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 198 KRKYKKDLATNKRALRRLR 254
KRK KKD+ N RA+RRLR
Sbjct: 244 KRKNKKDITGNARAVRRLR 262
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 107 bits (257), Expect = 1e-24
Identities = 48/71 (67%), Positives = 56/71 (78%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDNRMVN 180
AIAYGLD K +NVLIFDLGGGTFDVS+L I+ G+FEV +T GDTHLGGEDFDN +V
Sbjct: 182 AIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVE 241
Query: 181 HFVQELRGNTK 213
HF+QE + K
Sbjct: 242 HFIQEFKRKQK 252
Score = 99 bits (238), Expect = 2e-22
Identities = 45/71 (63%), Positives = 59/71 (83%)
Frame = +2
Query: 254 SACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 433
SACERAKR LSS TQ ++E+DSL GIDF +SITRARFE++NA F++T++PV K L+D+
Sbjct: 267 SACERAKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDPVAKVLKDS 326
Query: 434 KMDKAQIHDIV 466
K+ KA +HDIV
Sbjct: 327 KVPKADVHDIV 337
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 198 KRKYKKDLATNKRALRRLR 254
KRK K D++ + RALRRLR
Sbjct: 248 KRKQKIDISDDPRALRRLR 266
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 97.5 bits (232), Expect = 1e-21
Identities = 41/64 (64%), Positives = 57/64 (89%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDNRMVN 180
AIAYGLDK T E++++++DLGGGTFDVS+L+I++G+FEV +T GDTHLGGEDFDNR++N
Sbjct: 211 AIAYGLDKTDT-EKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVIN 269
Query: 181 HFVQ 192
+ +
Sbjct: 270 YLAR 273
Score = 81.0 bits (191), Expect = 1e-16
Identities = 36/68 (52%), Positives = 52/68 (76%)
Frame = +2
Query: 263 ERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD 442
E+AKRTLSS IEI+S F G DF +++RA+FEE+N DLF+ T++PVE+ L+D+ +
Sbjct: 298 EKAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLK 357
Query: 443 KAQIHDIV 466
K++I DIV
Sbjct: 358 KSEIDDIV 365
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 93.1 bits (221), Expect = 2e-20
Identities = 42/69 (60%), Positives = 53/69 (76%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDNRMVN 180
A+AYGLDKK + V +FDLGGGTFD+SIL + +G+FEV+ST GDTHLGGEDFD +V
Sbjct: 224 ALAYGLDKKN--DAIVAVFDLGGGTFDISILELNNGVFEVRSTNGDTHLGGEDFDVALVR 281
Query: 181 HFVQELRGN 207
H V+ + N
Sbjct: 282 HIVETFKKN 290
Score = 40.3 bits (90), Expect = 2e-04
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Frame = +2
Query: 257 ACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSL 424
A E+AK LSS ++ I + + I+RA+FE+L L R T++P +++L
Sbjct: 308 AAEKAKCELSSLSKTDISLPFITADATGPKHINMEISRAQFEKLVDPLVRRTIDPCKRAL 367
Query: 425 RDAKMDKAQIHDIV 466
+DA + ++I++++
Sbjct: 368 KDANLQTSEINEVI 381
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 52.8 bits (121), Expect = 3e-08
Identities = 27/83 (32%), Positives = 44/83 (53%)
Frame = +2
Query: 218 PRYQQESS*AFASACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRS 397
PR S + CE KR LS+ T AS +DSL +GIDF++SI R R++ +
Sbjct: 277 PRKNARSLAKLRAQCEITKRVLSNGTTASAAVDSLADGIDFHSSINRLRYDLAASATLNR 336
Query: 398 TMEPVEKSLRDAKMDKAQIHDIV 466
+ V +++ A M+ I +++
Sbjct: 337 MADLVTEAVEKANMEPFDISEVI 359
Score = 37.9 bits (84), Expect = 0.001
Identities = 14/53 (26%), Positives = 33/53 (62%)
Frame = +1
Query: 37 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDNRMVNHFVQE 195
++ V++ + G +VS+++++ G+ + ++ D +LGGE + +VN F +E
Sbjct: 216 DKTVVVANFGATRSEVSVVSVKGGLMTILASVHDENLGGEQLTDVLVNFFAKE 268
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 51.2 bits (117), Expect = 1e-07
Identities = 24/67 (35%), Positives = 42/67 (62%)
Frame = +2
Query: 266 RAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 445
R K LS++++A I+ L +GIDF ITR+ E L D+ + +EP+ K+L+ A +
Sbjct: 303 RVKHILSANSEAIASIEELADGIDFRLKITRSVLESLCKDMEDAAVEPINKALKKANLTF 362
Query: 446 AQIHDIV 466
++I+ I+
Sbjct: 363 SEINSII 369
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 47.2 bits (107), Expect = 2e-06
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +1
Query: 1 AIAYGLDKKGTGE----RNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDN 168
A+ YG+ K E R V I D G + VSI+ G F +KST D +LG + D
Sbjct: 182 ALTYGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNMDK 241
Query: 169 RMVNHFVQELRGNTK 213
++++F E + K
Sbjct: 242 ALIDYFAAEFKEKYK 256
Score = 46.8 bits (106), Expect = 2e-06
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +2
Query: 251 ASACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRD 430
A+A ER K+ LS++ A + ++ + ID + I R+ FEEL L P+EK+L
Sbjct: 270 ATAVERLKKVLSANANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERLTPPIEKALEL 329
Query: 431 AKMDKAQIHDI 463
A + K ++ I
Sbjct: 330 AGIKKEDLYSI 340
>SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 29.1 bits (62), Expect = 0.45
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 314 LSQCSLVWTMTRSSLPSHMQTQTPKSSL 231
+S C ++WTM+ P HM +T +S+
Sbjct: 265 MSFCGVIWTMSGYDAPFHMSEETANASV 292
>SPBC13G1.10c |mug81||ATP-dependent RNA helicase
Slh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1935
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = -2
Query: 499 APWGYEXSHPPDNIVDLSLIHLGITERLLHWLHGRPEQIGVQLLE 365
A W ++P +V ++ + + ER+ W H E +G+ ++E
Sbjct: 1170 ATWRALHNYPKSKVVYIAPMKALVKERVKDWGHRLVEPMGISMIE 1214
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 458 RGFEPYPSWHHGETSPLAP 402
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 26.2 bits (55), Expect = 3.2
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +1
Query: 16 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDNRMVNHF 186
LDK G+ I GG T SIL +GI VK E F+N F
Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKWAYETFNNERAIKF 104
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 157 DFDNRMVNHFVQELRGNTKRTSLPTRELLGVCV 255
+F NR++N F L NT + L ELLG +
Sbjct: 831 EFRNRLINSFSGPLDKNTCQRLLTEAELLGFTI 863
>SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 564
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -2
Query: 478 SHPPDNIVDLSL-IHLGITERLLHWLHGRPEQ 386
S P D+ ++L + +H G TERL + L+ P +
Sbjct: 316 SAPFDDFIELFVAVHSGFTERLANRLYSMPHE 347
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 317 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 448
SL G+D+YT I E +A +S+ E +K D + D++
Sbjct: 331 SLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRS 372
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 73 TFDVSILTIEDGIFEVKSTXGDTHL 147
TF I DG+FE GD+HL
Sbjct: 48 TFPTEIWETRDGLFEEPVGKGDSHL 72
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 71 PPPRSKISTFRSPVPFLS 18
PPPRS ST R P P S
Sbjct: 364 PPPRSAPSTGRQPPPLSS 381
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,219,230
Number of Sequences: 5004
Number of extensions: 43252
Number of successful extensions: 157
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -