Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0755.Seq
(548 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 134 5e-32
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 132 1e-31
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 114 3e-26
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 112 1e-25
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 112 1e-25
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 105 3e-23
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 105 3e-23
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 105 3e-23
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 93 9e-20
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 93 9e-20
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 71 6e-13
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 71 7e-13
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 71 7e-13
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 44 1e-04
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 36 0.025
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 36 0.025
AF039052-3|AAF98627.1| 391|Caenorhabditis elegans Hypothetical ... 29 2.9
U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily ass... 27 6.7
U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily ass... 27 6.7
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 27 6.7
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 27 6.7
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ... 27 6.7
Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical pr... 27 8.9
U21317-2|AAA62531.3| 729|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuo... 27 8.9
AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuo... 27 8.9
AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuo... 27 8.9
AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuo... 27 8.9
AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuro... 27 8.9
AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuo... 27 8.9
AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 134 bits (323), Expect = 5e-32
Identities = 64/71 (90%), Positives = 70/71 (98%)
Frame = +2
Query: 254 SACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 433
+ACERAKRTLSSS+QASIEIDSLFEGIDFYT+ITRARFEEL ADLFRSTM+PVEKSLRDA
Sbjct: 266 TACERAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDA 325
Query: 434 KMDKAQIHDIV 466
KMDK+Q+HDIV
Sbjct: 326 KMDKSQVHDIV 336
Score = 132 bits (320), Expect = 1e-31
Identities = 62/72 (86%), Positives = 64/72 (88%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDNRMVN 180
AIAYGLDKKG GERNVLIFDLGGGTFDVSILTIEDGIFEVKST GDTHLGGEDFDNRMVN
Sbjct: 181 AIAYGLDKKGHGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 240
Query: 181 HFVQELRGNTKR 216
HF E + K+
Sbjct: 241 HFCAEFKRKHKK 252
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3
Query: 186 CPGVKRKYKKDLATNKRALRRLR 254
C KRK+KKDLA+N RALRRLR
Sbjct: 243 CAEFKRKHKKDLASNPRALRRLR 265
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1
Query: 466 LVGGXTRIPKVXKL 507
LVGG TRIPKV KL
Sbjct: 337 LVGGSTRIPKVQKL 350
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 132 bits (320), Expect = 1e-31
Identities = 62/72 (86%), Positives = 64/72 (88%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDNRMVN 180
AIAYGLDKKG GERNVLIFDLGGGTFDVSILTIEDGIFEVKST GDTHLGGEDFDNRMVN
Sbjct: 181 AIAYGLDKKGHGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 240
Query: 181 HFVQELRGNTKR 216
HF E + K+
Sbjct: 241 HFCAEFKRKHKK 252
Score = 129 bits (311), Expect = 1e-30
Identities = 62/71 (87%), Positives = 67/71 (94%)
Frame = +2
Query: 254 SACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 433
+ACERA TLSSS QASIEIDSLFEGIDFYT+ITRARFEEL ADLFRSTM+PVEKSLRDA
Sbjct: 266 TACERANETLSSSCQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDA 325
Query: 434 KMDKAQIHDIV 466
KMDK+Q+HDIV
Sbjct: 326 KMDKSQVHDIV 336
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3
Query: 186 CPGVKRKYKKDLATNKRALRRLR 254
C KRK+KKDLA+N RALRRLR
Sbjct: 243 CAEFKRKHKKDLASNPRALRRLR 265
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1
Query: 466 LVGGXTRIPKVXKL 507
LVGG TRIPKV KL
Sbjct: 337 LVGGSTRIPKVQKL 350
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 114 bits (275), Expect = 3e-26
Identities = 52/71 (73%), Positives = 64/71 (90%)
Frame = +2
Query: 254 SACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 433
+ACERAKRTLSSST+A++E+DSLF+G DFY+ ITRARFEEL ADLFR T+EPVEK+LRDA
Sbjct: 266 TACERAKRTLSSSTEATVEVDSLFDGTDFYSKITRARFEELCADLFRKTLEPVEKALRDA 325
Query: 434 KMDKAQIHDIV 466
K DK +I ++V
Sbjct: 326 KTDKGRIDEVV 336
Score = 107 bits (256), Expect = 7e-24
Identities = 50/71 (70%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTXGDTHLGGEDFDNRMV 177
A+AYGLDK T E+N+LIFDLGGGTFDVSIL+I +G IFEVKST GDTHLGGEDFD+R++
Sbjct: 180 ALAYGLDKGITDEKNILIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLGGEDFDSRVL 239
Query: 178 NHFVQELRGNT 210
HF+ E + T
Sbjct: 240 QHFMTEFKRKT 250
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 198 KRKYKKDLATNKRALRRLR 254
KRK KD+++N RA+RRLR
Sbjct: 247 KRKTGKDISSNPRAIRRLR 265
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 466 LVGGXTRIPKVXKLRK 513
LVGG TRIPK+ KL K
Sbjct: 337 LVGGSTRIPKIQKLLK 352
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 112 bits (270), Expect = 1e-25
Identities = 52/71 (73%), Positives = 64/71 (90%)
Frame = +2
Query: 254 SACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 433
+ACERAKRTLSSS++A +E+DSLFEGID T ITRARFEEL ADLFR T+EPVEK+LRDA
Sbjct: 266 TACERAKRTLSSSSEACVEVDSLFEGIDLCTKITRARFEELCADLFRKTLEPVEKALRDA 325
Query: 434 KMDKAQIHDIV 466
K+DK++I ++V
Sbjct: 326 KLDKSKIDEVV 336
Score = 107 bits (257), Expect = 5e-24
Identities = 52/77 (67%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTXGDTHLGGEDFDNRMV 177
A+AYGLDK E+NVLIFDLGGGTFDVSIL+I +G IFEVKST GDTHLGGEDFD RM+
Sbjct: 180 ALAYGLDKGIQDEKNVLIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLGGEDFDQRML 239
Query: 178 NHFVQELRGNTKRTSLP 228
HF+ E + T + P
Sbjct: 240 QHFMNEFKRKTGKDISP 256
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 198 KRKYKKDLATNKRALRRLR 254
KRK KD++ N RA+RRLR
Sbjct: 247 KRKTGKDISPNPRAIRRLR 265
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 466 LVGGXTRIPKVXKLRK 513
LVGG TR+PK+ KL K
Sbjct: 337 LVGGSTRVPKIQKLLK 352
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 112 bits (270), Expect = 1e-25
Identities = 52/71 (73%), Positives = 64/71 (90%)
Frame = +2
Query: 254 SACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 433
+ACERAKRTLSSS++A +E+DSLFEGID T ITRARFEEL ADLFR T+EPVEK+LRDA
Sbjct: 266 TACERAKRTLSSSSEACVEVDSLFEGIDLCTKITRARFEELCADLFRKTLEPVEKALRDA 325
Query: 434 KMDKAQIHDIV 466
K+DK++I ++V
Sbjct: 326 KLDKSKIDEVV 336
Score = 107 bits (257), Expect = 5e-24
Identities = 52/77 (67%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTXGDTHLGGEDFDNRMV 177
A+AYGLDK E+NVLIFDLGGGTFDVSIL+I +G IFEVKST GDTHLGGEDFD RM+
Sbjct: 180 ALAYGLDKGIQDEKNVLIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLGGEDFDQRML 239
Query: 178 NHFVQELRGNTKRTSLP 228
HF+ E + T + P
Sbjct: 240 QHFMNEFKRKTGKDISP 256
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 198 KRKYKKDLATNKRALRRLR 254
KRK KD++ N RA+RRLR
Sbjct: 247 KRKTGKDISPNPRAIRRLR 265
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 466 LVGGXTRIPKVXKLRK 513
LVGG TR+PK+ KL K
Sbjct: 337 LVGGSTRVPKIQKLLK 352
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 105 bits (251), Expect = 3e-23
Identities = 46/64 (71%), Positives = 58/64 (90%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDNRMVN 180
AIAYGLDKK GERN+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++
Sbjct: 211 AIAYGLDKKD-GERNILVFDLGGGTFDVSMLTIDNGVFEVLATNGDTHLGGEDFDQRVME 269
Query: 181 HFVQ 192
+F++
Sbjct: 270 YFIK 273
Score = 84.6 bits (200), Expect = 4e-17
Identities = 37/68 (54%), Positives = 53/68 (77%)
Frame = +2
Query: 263 ERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD 442
E+AKR LS+ Q +EI+SLF+G DF ++TRA+FEELN DLFR+T++PV+K L D+ +
Sbjct: 298 EKAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLK 357
Query: 443 KAQIHDIV 466
K +H+IV
Sbjct: 358 KDDVHEIV 365
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 105 bits (251), Expect = 3e-23
Identities = 46/64 (71%), Positives = 58/64 (90%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDNRMVN 180
AIAYGLDKK GERN+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++
Sbjct: 211 AIAYGLDKKD-GERNILVFDLGGGTFDVSMLTIDNGVFEVLATNGDTHLGGEDFDQRVME 269
Query: 181 HFVQ 192
+F++
Sbjct: 270 YFIK 273
Score = 84.6 bits (200), Expect = 4e-17
Identities = 37/68 (54%), Positives = 53/68 (77%)
Frame = +2
Query: 263 ERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD 442
E+AKR LS+ Q +EI+SLF+G DF ++TRA+FEELN DLFR+T++PV+K L D+ +
Sbjct: 298 EKAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLK 357
Query: 443 KAQIHDIV 466
K +H+IV
Sbjct: 358 KDDVHEIV 365
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 105 bits (251), Expect = 3e-23
Identities = 46/64 (71%), Positives = 57/64 (89%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDNRMVN 180
AIAYGLDKK GERN+L+FDLGGGTFDVS+LTI+ G+FEV +T GDTHLGGEDFD R++
Sbjct: 208 AIAYGLDKKD-GERNILVFDLGGGTFDVSLLTIDSGVFEVLATNGDTHLGGEDFDQRVME 266
Query: 181 HFVQ 192
+F++
Sbjct: 267 YFIK 270
Score = 88.2 bits (209), Expect = 3e-18
Identities = 40/68 (58%), Positives = 53/68 (77%)
Frame = +2
Query: 263 ERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD 442
E+AKR LS+ Q IEI+SLF+G DF ++TRA+FEELN DLFR+T++PV+K L DA M
Sbjct: 295 EKAKRALSTQHQTKIEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDADMK 354
Query: 443 KAQIHDIV 466
K +H+IV
Sbjct: 355 KTDVHEIV 362
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 93.5 bits (222), Expect = 9e-20
Identities = 42/67 (62%), Positives = 54/67 (80%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDNRMVN 180
A+AYGLDK G++ + ++DLGGGTFDVSIL I+ G+FEVKST GDT LGGEDFD+ +V+
Sbjct: 205 ALAYGLDKDA-GDKIIAVYDLGGGTFDVSILEIQKGVFEVKSTNGDTFLGGEDFDHALVH 263
Query: 181 HFVQELR 201
H V E +
Sbjct: 264 HLVGEFK 270
Score = 46.4 bits (105), Expect = 1e-05
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Frame = +2
Query: 257 ACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSL 424
A E+AK LSS+TQ I + + +TRA+FE++ DL + T+EP L
Sbjct: 290 AAEKAKCELSSTTQTDINLPYITMDQSGPKHLNLKLTRAKFEQIVGDLIKRTIEPCRNVL 349
Query: 425 RDAKMDKAQIHDIV 466
DA++ +QI D++
Sbjct: 350 HDAEVKSSQIADVL 363
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 93.5 bits (222), Expect = 9e-20
Identities = 42/67 (62%), Positives = 54/67 (80%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDNRMVN 180
A+AYGLDK G++ + ++DLGGGTFDVSIL I+ G+FEVKST GDT LGGEDFD+ +V+
Sbjct: 205 ALAYGLDKDA-GDKIIAVYDLGGGTFDVSILEIQKGVFEVKSTNGDTFLGGEDFDHALVH 263
Query: 181 HFVQELR 201
H V E +
Sbjct: 264 HLVGEFK 270
Score = 49.6 bits (113), Expect = 1e-06
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Frame = +2
Query: 257 ACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSL 424
A E+AK LSS+TQ I + + +TRA+FE++ DL + T+EP K+L
Sbjct: 290 AAEKAKCELSSTTQTDINLPYITMDQSGPKHLNLKLTRAKFEQIVGDLIKRTIEPCRKAL 349
Query: 425 RDAKMDKAQIHDIV 466
DA++ +QI D++
Sbjct: 350 HDAEVKSSQIADVL 363
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 70.9 bits (166), Expect = 6e-13
Identities = 30/66 (45%), Positives = 47/66 (71%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDNRMVN 180
A+AYGL KK G NV++ DLGGGT DVS+L ++ G+F ++ G+ LGG+DF++R+
Sbjct: 215 ALAYGLHKK-QGVENVVVVDLGGGTLDVSVLWLQGGVFVTQAMAGNNRLGGQDFNDRVQK 273
Query: 181 HFVQEL 198
H + ++
Sbjct: 274 HLISKI 279
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = +2
Query: 263 ERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD 442
E+ K L++ +I ++ G Y +TR FE LN DL ++ P+ +L DA +D
Sbjct: 301 EKGKIRLTNVPSTTISLNLKTVGKWNY-ELTRDEFETLNGDLLKAIELPITAALADANLD 359
Query: 443 KAQIHDIV 466
A + +IV
Sbjct: 360 TADVDEIV 367
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 70.5 bits (165), Expect = 7e-13
Identities = 31/67 (46%), Positives = 45/67 (67%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDNRMVN 180
AIAY L + RN+LI+DLGGGTFDV+ + ++ VK+ GDTHLGG+D DN ++
Sbjct: 177 AIAYSLKGQRLSRRNILIYDLGGGTFDVAAVNVDGPRITVKAKGGDTHLGGQDIDNIIMI 236
Query: 181 HFVQELR 201
++E +
Sbjct: 237 KMLEEFK 243
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/70 (44%), Positives = 46/70 (65%)
Frame = +2
Query: 257 ACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAK 436
A E AK TLS+S+ A IE++ L GIDF I+R FE +L +T+ VE+ +R+A
Sbjct: 263 AAEVAKITLSASSVARIELECLHLGIDFIMRISRTDFESWIENLLMATVIHVERVIREAN 322
Query: 437 MDKAQIHDIV 466
+ K+QI++IV
Sbjct: 323 LKKSQINEIV 332
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 70.5 bits (165), Expect = 7e-13
Identities = 31/67 (46%), Positives = 45/67 (67%)
Frame = +1
Query: 1 AIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFDNRMVN 180
AIAY L + RN+LI+DLGGGTFDV+ + ++ VK+ GDTHLGG+D DN ++
Sbjct: 177 AIAYSLKGQRLSRRNILIYDLGGGTFDVAAVNVDGPRITVKAKGGDTHLGGQDIDNIIMI 236
Query: 181 HFVQELR 201
++E +
Sbjct: 237 KMLEEFK 243
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/70 (44%), Positives = 46/70 (65%)
Frame = +2
Query: 257 ACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAK 436
A E AK TLS+S+ A IE++ L GIDF I+R FE +L +T+ VE+ +R+A
Sbjct: 263 AAEVAKITLSASSVARIELECLHLGIDFIMRISRTDFESWIENLLMATVIHVERVIREAN 322
Query: 437 MDKAQIHDIV 466
+ K+QI++IV
Sbjct: 323 LKKSQINEIV 332
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +2
Query: 248 FASACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLR 427
F+ ER K+ LS++ + +I+S E ID +TR F L +D+ EP+E++LR
Sbjct: 298 FSKEAERLKQVLSANAEHFAQIESAHEDIDAKLKVTREDFNHLISDMESRFGEPIEQALR 357
Query: 428 DAKMDKAQIHDIV 466
A++ I V
Sbjct: 358 MAQIPIDDIDQFV 370
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 36.7 bits (81), Expect = 0.011
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +1
Query: 1 AIAYGLDKKGTGE-----RNVLIFDLGGGTFDVSILTIEDGIFEVKSTXGDTHLGGEDFD 165
A+AYG+ K+ E RNV+ D+G + S++ G ++ +T D GG FD
Sbjct: 180 ALAYGIYKQDLPEEDAKSRNVVFLDIGHSSTQASLVAFNRGKLQMVNTSYDLESGGIWFD 239
Query: 166 NRMVNHFVQELR 201
+ HF +E +
Sbjct: 240 ALIREHFRKEFK 251
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 35.5 bits (78), Expect = 0.025
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +2
Query: 263 ERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD 442
ER K+ LS++ +++SLFE +F +TR E++ DL P+ ++ A++
Sbjct: 290 ERVKQVLSANKDTYAQVESLFEEQNFRAKVTREELEKMIEDLEPRIAAPILDAIGMAQIS 349
Query: 443 KAQIHDIV 466
I +V
Sbjct: 350 TNDIDLVV 357
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 35.5 bits (78), Expect = 0.025
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +2
Query: 263 ERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD 442
ER K+ LS++ +++SLFE +F +TR E++ DL P+ ++ A++
Sbjct: 306 ERVKQVLSANKDTYAQVESLFEEQNFRAKVTREELEKMIEDLEPRIAAPILDAIGMAQIS 365
Query: 443 KAQIHDIV 466
I +V
Sbjct: 366 TNDIDLVV 373
>AF039052-3|AAF98627.1| 391|Caenorhabditis elegans Hypothetical
protein T22D1.5 protein.
Length = 391
Score = 28.7 bits (61), Expect = 2.9
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 251 ASACERAKRTLSSSTQASIEI--DSLFEGIDFYTS-ITRARFEELNADLFRSTMEPVEKS 421
A+ E T S S ++E S+FE + Y+ ITR EEL + +F + + S
Sbjct: 68 ATKLENESSTSSCSMHTALEFVNSSIFERVRSYSEVITR---EELQSAIFERKLTETDCS 124
Query: 422 LRDAKMDKAQIHDIVWWVA 478
+A+M + + + W A
Sbjct: 125 KEEAEMYSIIVTERILWTA 143
>U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform b protein.
Length = 1321
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/33 (42%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = -1
Query: 323 RENLS-QCSLVWTMTRSSLPSHMQTQTPKSSLV 228
R+NL+ QC WT +SS+P H+Q +P++S++
Sbjct: 94 RDNLTEQCK--WT-NQSSIPQHLQFISPENSIL 123
>U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform a protein.
Length = 1372
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/33 (42%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = -1
Query: 323 RENLS-QCSLVWTMTRSSLPSHMQTQTPKSSLV 228
R+NL+ QC WT +SS+P H+Q +P++S++
Sbjct: 94 RDNLTEQCK--WT-NQSSIPQHLQFISPENSIL 123
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 27.5 bits (58), Expect = 6.7
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 281 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV-EKSLR 427
L +S +EID+ E + Y SIT A+ +N L EPV +K LR
Sbjct: 374 LRNSHPIEVEIDNPNELDEIYDSITYAKSNSVNRMLCYYLSEPVFQKGLR 423
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 27.5 bits (58), Expect = 6.7
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 281 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV-EKSLR 427
L +S +EID+ E + Y SIT A+ +N L EPV +K LR
Sbjct: 438 LRNSHPIEVEIDNPNELDEIYDSITYAKSNSVNRMLCYYLSEPVFQKGLR 487
>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
protein F59H6.5 protein.
Length = 1486
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = -2
Query: 208 YFLLTPGQSGSPCDCQSPHLP----SGCRRRWISPRRYHP 101
Y ++T PC Q+PH P C +R+ P+ +HP
Sbjct: 622 YRIVTTAMMHRPCGAQNPHSPCMVDGHCSKRY--PKDFHP 659
>Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical
protein ZK637.8f protein.
Length = 889
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -1
Query: 116 SKIPSSMVRMDTSKVPPPRSKISTF 42
S++PS + RM+T++ PP +K + F
Sbjct: 366 SQVPSILNRMETNEAPPTYNKTNKF 390
>Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical
protein ZK637.8e protein.
Length = 888
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -1
Query: 116 SKIPSSMVRMDTSKVPPPRSKISTF 42
S++PS + RM+T++ PP +K + F
Sbjct: 371 SQVPSILNRMETNEAPPTYNKTNKF 395
>Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical
protein ZK637.8d protein.
Length = 899
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -1
Query: 116 SKIPSSMVRMDTSKVPPPRSKISTF 42
S++PS + RM+T++ PP +K + F
Sbjct: 382 SQVPSILNRMETNEAPPTYNKTNKF 406
>Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical
protein ZK637.8c protein.
Length = 894
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -1
Query: 116 SKIPSSMVRMDTSKVPPPRSKISTF 42
S++PS + RM+T++ PP +K + F
Sbjct: 371 SQVPSILNRMETNEAPPTYNKTNKF 395
>Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical
protein ZK637.8b protein.
Length = 883
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -1
Query: 116 SKIPSSMVRMDTSKVPPPRSKISTF 42
S++PS + RM+T++ PP +K + F
Sbjct: 366 SQVPSILNRMETNEAPPTYNKTNKF 390
>Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical
protein ZK637.8a protein.
Length = 905
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -1
Query: 116 SKIPSSMVRMDTSKVPPPRSKISTF 42
S++PS + RM+T++ PP +K + F
Sbjct: 382 SQVPSILNRMETNEAPPTYNKTNKF 406
>U21317-2|AAA62531.3| 729|Caenorhabditis elegans Hypothetical
protein B0495.5 protein.
Length = 729
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 115 EVKSTXGDTHLGGEDFDNRMVNHFVQELRGNTKRTSLPTREL 240
E+K GD +G + + ++F E GN R+S P EL
Sbjct: 360 EIKQLLGDKKIGSASLFDVVADYFDVEDSGNVARSSDPHGEL 401
>AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuolar
proton pump 101kDa subunit variant protein.
Length = 889
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -1
Query: 116 SKIPSSMVRMDTSKVPPPRSKISTF 42
S++PS + RM+T++ PP +K + F
Sbjct: 366 SQVPSILNRMETNEAPPTYNKTNKF 390
>AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuolar
proton pump 101kDa subunit variant protein.
Length = 888
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -1
Query: 116 SKIPSSMVRMDTSKVPPPRSKISTF 42
S++PS + RM+T++ PP +K + F
Sbjct: 371 SQVPSILNRMETNEAPPTYNKTNKF 395
>AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuolar
proton pump 103kDa subunit variant protein.
Length = 899
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -1
Query: 116 SKIPSSMVRMDTSKVPPPRSKISTF 42
S++PS + RM+T++ PP +K + F
Sbjct: 382 SQVPSILNRMETNEAPPTYNKTNKF 406
>AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuolar
proton pump 102kDa subunit variant protein.
Length = 894
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -1
Query: 116 SKIPSSMVRMDTSKVPPPRSKISTF 42
S++PS + RM+T++ PP +K + F
Sbjct: 371 SQVPSILNRMETNEAPPTYNKTNKF 395
>AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuronal
vacuolar protonpump 100 kDa subunit variant protein.
Length = 883
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -1
Query: 116 SKIPSSMVRMDTSKVPPPRSKISTF 42
S++PS + RM+T++ PP +K + F
Sbjct: 366 SQVPSILNRMETNEAPPTYNKTNKF 390
>AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuolar
proton pump 103kDa subunit variant protein.
Length = 905
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -1
Query: 116 SKIPSSMVRMDTSKVPPPRSKISTF 42
S++PS + RM+T++ PP +K + F
Sbjct: 382 SQVPSILNRMETNEAPPTYNKTNKF 406
>AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical
protein F39G3.3 protein.
Length = 520
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 491 GIRVXPPTRQYRGFEPYPSWHHGETSPLAP 402
G++ P RQ R F P P+W H E + P
Sbjct: 236 GMQQQSPERQ-RAFSPTPAWRHQENVVVDP 264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,466,594
Number of Sequences: 27780
Number of extensions: 254537
Number of successful extensions: 871
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -