Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0754.Seq
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132; Eukar... 113 4e-24
UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69; Eukary... 98 2e-19
UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41; Eumeta... 94 3e-18
UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga... 72 1e-11
UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellu... 71 3e-11
UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6; Euryar... 71 4e-11
UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;... 69 1e-10
UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4; Thermo... 64 2e-09
UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|R... 58 2e-07
UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4; Pyroba... 55 1e-06
UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole geno... 52 1e-05
UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2; Crenarchae... 51 3e-05
UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus... 49 1e-04
UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;... 43 0.006
UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3; Eukaryo... 40 0.044
UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein ... 38 0.18
UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725... 36 0.96
UniRef50_Q5RJR1 Cluster: Putative uncharacterized protein; n=2; ... 34 3.9
UniRef50_Q69T50 Cluster: Putative uncharacterized protein P0664C... 34 3.9
UniRef50_Q9UPT8 Cluster: Zinc finger CCCH domain-containing prot... 33 6.7
UniRef50_UPI0000E8063D Cluster: PREDICTED: hypothetical protein;... 33 8.9
UniRef50_A5NVT3 Cluster: ABC transporter related; n=3; Bacteria|... 33 8.9
UniRef50_A5KZK6 Cluster: Rhs element Vgr protein:Gp5-like protei... 33 8.9
>UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132;
Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila
melanogaster (Fruit fly)
Length = 204
Score = 113 bits (272), Expect = 4e-24
Identities = 56/90 (62%), Positives = 63/90 (70%)
Frame = -1
Query: 527 FRIRVRLVPASVQLLRVPLYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWV 348
+RIRVR + + YGKPKSHGVNQLKP R LQSIAEE L+SYW+
Sbjct: 62 YRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWI 121
Query: 347 AQDSSYKYFEVILVDPSHKAIRRDPKINWI 258
AQD+SYKYFEVIL+D H AIRRDPKINWI
Sbjct: 122 AQDASYKYFEVILIDTHHSAIRRDPKINWI 151
Score = 86.6 bits (205), Expect = 5e-16
Identities = 38/50 (76%), Positives = 44/50 (88%)
Frame = -3
Query: 249 VHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 100
VHKHRE+RGLTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N + RKR
Sbjct: 155 VHKHRELRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -2
Query: 592 PRPTRPDKARRLGYRANQGYV 530
PRPTRPDKARRLGYRA QG+V
Sbjct: 40 PRPTRPDKARRLGYRAKQGFV 60
>UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69;
Eukaryota|Rep: 60S ribosomal protein L15 - Homo sapiens
(Human)
Length = 204
Score = 97.9 bits (233), Expect = 2e-19
Identities = 48/90 (53%), Positives = 59/90 (65%)
Frame = -1
Query: 527 FRIRVRLVPASVQLLRVPLYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWV 348
+RIRVR + + YGKP HGVNQLK R+LQS+AEE L+SYWV
Sbjct: 62 YRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWV 121
Query: 347 AQDSSYKYFEVILVDPSHKAIRRDPKINWI 258
+DS+YK+FEVIL+DP HKAIRR+P WI
Sbjct: 122 GEDSTYKFFEVILIDPFHKAIRRNPDTQWI 151
Score = 95.5 bits (227), Expect = 1e-18
Identities = 80/205 (39%), Positives = 102/205 (49%), Gaps = 7/205 (3%)
Frame = -3
Query: 693 RKLYRKKLXQC*CVFLLRVRVWQSGQVDWYARRFPGPQGRTKPED*ATVLTKV----MLI 526
++L+RKK FLLRVR WQ Q+ R P P T+P+ + K ++
Sbjct: 8 QELWRKKQSDV-MRFLLRVRCWQYRQLS-ALHRAPRP---TRPDKARRLGYKAKQGYVIY 62
Query: 525 QNPCATGARKRPVAKGATLWQAQEPWCQPVE-AHAQPSI--HC*GACWPSLRWSPCVELL 355
+ G RKRPV KGAT + ++ A + S+ G +LR +
Sbjct: 63 RIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVG 122
Query: 354 LGCTRFFIQVFRGYPRGPVTQGHSSRS*DQLDRDAVHKHREMRGLTSAGRSSRGLGKGHR 175
T F +V P + + Q VHKHREMRGLTSAGR SRGLGKGH+
Sbjct: 123 EDSTYKFFEVILIDPFHKAIRRNPDT---QWITKPVHKHREMRGLTSAGRKSRGLGKGHK 179
Query: 174 YSQTKGGSRRAAWLRRNTLQLRRKR 100
+ T GGSRRAAW RRNTLQL R R
Sbjct: 180 FHHTIGGSRRAAWRRRNTLQLHRYR 204
Score = 46.8 bits (106), Expect = 5e-04
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -2
Query: 592 PRPTRPDKARRLGYRANQGYV 530
PRPTRPDKARRLGY+A QGYV
Sbjct: 40 PRPTRPDKARRLGYKAKQGYV 60
>UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41;
Eumetazoa|Rep: 60S ribosomal protein L15 -
Caenorhabditis elegans
Length = 204
Score = 93.9 bits (223), Expect = 3e-18
Identities = 42/90 (46%), Positives = 60/90 (66%)
Frame = -1
Query: 527 FRIRVRLVPASVQLLRVPLYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWV 348
+R+RVR + + YGKPK+HGVN+LK ++ Q++AE L+SYWV
Sbjct: 62 YRVRVRRGNRKRPVCKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYWV 121
Query: 347 AQDSSYKYFEVILVDPSHKAIRRDPKINWI 258
A+DS+YK++EV+L+DP HKAIRR+P WI
Sbjct: 122 AEDSTYKFYEVVLIDPFHKAIRRNPDTQWI 151
Score = 76.2 bits (179), Expect = 7e-13
Identities = 68/205 (33%), Positives = 97/205 (47%), Gaps = 7/205 (3%)
Frame = -3
Query: 693 RKLYRKKLXQC*CVFLLRVRVWQSGQVDWYARRFPGPQGRTKPED*ATVLTKV----MLI 526
++++RKK +LLR+R W Q+ R P P T+PE + + ++
Sbjct: 8 QEIWRKKQSDA-LRYLLRIRTWHYRQLS-AVHRVPRP---TRPEKARRLGYRAKQGFVVY 62
Query: 525 QNPCATGARKRPVAKGATLWQAQEPWCQPVE-AHAQPSIH--C*GACWPSLRWSPCVELL 355
+ G RKRPV KG T + + ++ A ++ ++ G SLR +
Sbjct: 63 RVRVRRGNRKRPVCKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYWVA 122
Query: 354 LGCTRFFIQVFRGYPRGPVTQGHSSRS*DQLDRDAVHKHREMRGLTSAGRSSRGLGKGHR 175
T F +V P + + Q VHKHRE RGLTSAGR SRGLGKG R
Sbjct: 123 EDSTYKFYEVVLIDPFHKAIRRNPDT---QWITKPVHKHREQRGLTSAGRKSRGLGKGWR 179
Query: 174 YSQTKGGSRRAAWLRRNTLQLRRKR 100
+S T+GGS+ W R+NT RKR
Sbjct: 180 FSATRGGSQAKNWKRKNTKVFHRKR 204
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = -2
Query: 595 LPRPTRPDKARRLGYRANQGYV 530
+PRPTRP+KARRLGYRA QG+V
Sbjct: 39 VPRPTRPEKARRLGYRAKQGFV 60
>UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L15e -
Caldivirga maquilingensis IC-167
Length = 185
Score = 72.1 bits (169), Expect = 1e-11
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Frame = -1
Query: 524 RIRVRLVPASVQLLRVPLYGK-PKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWV 348
R+RVR P + R P G+ PK GV + + NLQ +AE+ L SYWV
Sbjct: 63 RVRVRRGPFN---RRRPNTGRRPKRMGVYGVALSTNLQVVAEQRAARRFSNLEVLGSYWV 119
Query: 347 AQDSSYKYFEVILVDPSHKAIRRDPKINWIV 255
+D+ YK+FEV+++DPSH AIR DP W+V
Sbjct: 120 GEDAMYKWFEVVMIDPSHPAIRNDPDYAWVV 150
>UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellular
organisms|Rep: 50S ribosomal protein L15e - Pyrococcus
horikoshii
Length = 194
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/71 (46%), Positives = 42/71 (59%)
Frame = -1
Query: 464 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAI 285
KP G + P ++LQ IAEE L+SYWV +D YK+FEVI+VDP H I
Sbjct: 81 KPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVI 140
Query: 284 RRDPKINWIVM 252
+ DPKI WI +
Sbjct: 141 KSDPKIAWIAL 151
Score = 35.9 bits (79), Expect = 0.96
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -2
Query: 595 LPRPTRPDKARRLGYRANQGYV 530
+ RPTR D+AR LGY+A QGY+
Sbjct: 39 IERPTRLDRARALGYQAKQGYI 60
>UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L15e -
Halobacterium salinarium (Halobacterium halobium)
Length = 196
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/88 (39%), Positives = 49/88 (55%)
Frame = -1
Query: 521 IRVRLVPASVQLLRVPLYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQ 342
+RV + + + R + K GVN++ +NLQ IAEE L+SYWV +
Sbjct: 64 VRVSVRKGTARKSRFKAGRRTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGE 123
Query: 341 DSSYKYFEVILVDPSHKAIRRDPKINWI 258
D S K+FE IL+DP H AI+ D +NWI
Sbjct: 124 DGSQKWFEAILLDPEHGAIQNDDDLNWI 151
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -2
Query: 589 RPTRPDKARRLGYRANQGYV 530
RPTR DKAR LGY+A QG V
Sbjct: 43 RPTRLDKARELGYKAKQGVV 62
>UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L15E - Ignicoccus hospitalis KIN4/I
Length = 245
Score = 68.5 bits (160), Expect = 1e-10
Identities = 35/88 (39%), Positives = 49/88 (55%)
Frame = -1
Query: 521 IRVRLVPASVQLLRVPLYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQ 342
+RVR+ + R +PK GV P ++ + IAEE L+SYWVA+
Sbjct: 84 VRVRVRKGGLNRPRPNKGRRPKRMGVYGYAPAKSTRLIAEERAARKYPGLEVLNSYWVAE 143
Query: 341 DSSYKYFEVILVDPSHKAIRRDPKINWI 258
D Y+++EVILVDP H AI DP++ WI
Sbjct: 144 DGEYEWYEVILVDPHHPAICSDPELKWI 171
>UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L15e -
Sulfolobus acidocaldarius
Length = 217
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/88 (38%), Positives = 48/88 (54%)
Frame = -1
Query: 521 IRVRLVPASVQLLRVPLYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQ 342
+RVR+ + R +PK GV P++ + IAEE L SY+VA+
Sbjct: 62 VRVRVRRGGLNKPRPNSGRRPKRMGVYGYGPSKGYRWIAEERAARKFPNLEVLGSYYVAE 121
Query: 341 DSSYKYFEVILVDPSHKAIRRDPKINWI 258
D YKY+EVI+VD SH IR DP++ W+
Sbjct: 122 DGMYKYYEVIMVDYSHPVIRSDPELKWL 149
Score = 35.5 bits (78), Expect = 1.3
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = -3
Query: 258 RDAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRK 103
+D+V++ R RGLTSAG+ SRGL K KG +R ++ QL+R+
Sbjct: 150 QDSVNRKRVFRGLTSAGQKSRGLTKSR---GLKGTVQRKWKKKQKERQLKRR 198
Score = 33.1 bits (72), Expect = 6.7
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -2
Query: 595 LPRPTRPDKARRLGYRANQGYV 530
+ RPTR ++AR LGY+A QG+V
Sbjct: 39 IDRPTRLNRARALGYKAKQGFV 60
>UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|Rep:
Ribosomal protein L15 - Oryza sativa subsp. indica
(Rice)
Length = 438
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/51 (54%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = -3
Query: 249 VHKHREMRGLTSAGRSSRGL-GKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 100
VHKH E+ GLTSAG RGL GKGH + + + S RA W R T+ LRR R
Sbjct: 388 VHKHGELHGLTSAGNKYRGLRGKGHTHHKARPSSPRATWKRNQTVSLRRYR 438
Score = 37.5 bits (83), Expect = 0.31
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -2
Query: 598 ALPRPTRPDKARRLGYRANQGYVDSESVCDW 506
A+ RPTRPDKARRLG +A QG + + W
Sbjct: 35 AIGRPTRPDKARRLGDKAKQGPLAPTASYPW 65
Score = 35.5 bits (78), Expect(2) = 0.017
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -1
Query: 323 FEVILVDPSHKAIRRDPKINWI 258
FE+ILVD +H AIR D +INW+
Sbjct: 363 FEIILVDVAHSAIRDDLRINWL 384
Score = 25.4 bits (53), Expect(2) = 0.017
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 473 LYGKPKSHGVNQLKPTRN 420
+Y KPK G+ QLK RN
Sbjct: 339 VYSKPKHQGITQLKFQRN 356
>UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4;
Pyrobaculum|Rep: 50S ribosomal protein L15e -
Pyrobaculum aerophilum
Length = 191
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = -1
Query: 521 IRVRLVPASVQLLRVPLYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQ 342
+RVRL+ R +PK GV + ++ + +AEE L+SYWVA
Sbjct: 64 VRVRLMRGPFNRRRPDSGRRPKRMGVYGITAWKSWRQVAEERAARKHPNLEVLNSYWVAD 123
Query: 341 DSSYKYFEVILVDPSHKAIRRDP 273
D Y+YFEVIL+D + I+ DP
Sbjct: 124 DGIYRYFEVILIDCNLPTIKNDP 146
>UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 313
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = -1
Query: 464 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAI 285
+P + GV QLK RN + EE + + +DS+YKY+E+ILVD +H AI
Sbjct: 2 EPTNQGVTQLKFHRNKSLVTEERDGRKL------AGLKINEDSTYKYYEIILVDVAHSAI 55
Query: 284 RRDPKIN 264
+ DP+IN
Sbjct: 56 QNDPRIN 62
>UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2;
Crenarchaeota|Rep: Ribosomal protein L15E - Cenarchaeum
symbiosum
Length = 152
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/85 (30%), Positives = 46/85 (54%)
Frame = -1
Query: 521 IRVRLVPASVQLLRVPLYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQ 342
+R+R+ ++ R +PK GV ++K +++ +A L SY+V +
Sbjct: 59 VRMRVGTGGMRRQRPRGGRRPKHLGVTRIKADVSMKQVAVRRVLERYPNMSLLGSYFVYK 118
Query: 341 DSSYKYFEVILVDPSHKAIRRDPKI 267
D +Y +FEVIL DPSH + +DP++
Sbjct: 119 DGAYYWFEVILADPSHPRVAKDPEL 143
Score = 33.5 bits (73), Expect = 5.1
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2
Query: 595 LPRPTRPDKARRLGYRANQGYV 530
+ RPTR D+AR LGY+A QG V
Sbjct: 36 IERPTRIDRARSLGYKAKQGIV 57
>UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L15e - Candidatus Nitrosopumilus maritimus SCM1
Length = 190
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/85 (28%), Positives = 45/85 (52%)
Frame = -1
Query: 521 IRVRLVPASVQLLRVPLYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQ 342
+R+R+ ++ R +PK GV ++K N++++AE L SY++ +
Sbjct: 98 VRMRVGTGGMRKQRPTGGRRPKHLGVTRIKADDNMKTVAERRVSERYPNMKLLGSYFIYK 157
Query: 341 DSSYKYFEVILVDPSHKAIRRDPKI 267
D + +FEVIL DP H + +D ++
Sbjct: 158 DGKHYWFEVILADPDHPRVAQDKEL 182
>UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;
n=2; Euarchontoglires|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 172
Score = 43.2 bits (97), Expect = 0.006
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +3
Query: 258 DPVDLRIATNGLV*RVHEDNLEILV*RILCNPVRAQHXXXXXXXXXXLLSNGLKVARGLQ 437
DP+ +R++++ + ++EDNL+ + I NPV Q LSN LK + +Q
Sbjct: 31 DPLGVRLSSDSFMEWINEDNLKKFICEIFTNPVGIQDSQSSTMVPSSFLSNRLKASGKVQ 90
Query: 438 LVDTMALGLAI 470
LV+T+ LAI
Sbjct: 91 LVNTVVNRLAI 101
>UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3;
Eukaryota|Rep: 60S ribosomal protein L15 - Brugia
pahangi (Filarial nematode worm)
Length = 71
Score = 40.3 bits (90), Expect = 0.044
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = -2
Query: 589 RPTRPDKARRLGYRANQGYV 530
RPTRP+KARRLGY +N+GY+
Sbjct: 41 RPTRPEKARRLGYLSNEGYI 60
>UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein
isoform 2; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 2 - Pan troglodytes
Length = 110
Score = 38.3 bits (85), Expect = 0.18
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +3
Query: 258 DPVDLRIATNGLV*RVHEDNLEILV*RILCNPVRAQHXXXXXXXXXXLLSNGLKVARGL 434
DP+ +RI+++ + ++EDNL + I NPVR Q LL NGLK + L
Sbjct: 52 DPLGVRISSDSFMEWINEDNLRKFLCGIFTNPVRIQDAQSPMVASSSLLCNGLKASSKL 110
>UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725w;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein dl4725w - Arabidopsis thaliana (Mouse-ear cress)
Length = 520
Score = 35.9 bits (79), Expect = 0.96
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3
Query: 258 DPVDLRIATNGLV*RVHEDNLEILV*RILCNP 353
DPVD I ++G+V RV++DNL +LV R+L P
Sbjct: 477 DPVDPWIISDGIVCRVYKDNLVVLVGRVLRKP 508
>UniRef50_Q5RJR1 Cluster: Putative uncharacterized protein; n=2;
Rattus norvegicus|Rep: Putative uncharacterized protein
- Rattus norvegicus (Rat)
Length = 279
Score = 33.9 bits (74), Expect = 3.9
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Frame = -3
Query: 609 WYARRFPGPQGRTKPED*ATVLTKVMLIQNPCATGARKRPVAKGATLWQAQEPWCQPVEA 430
WY+ + P +T+P++ + T M GA RP A+ + + P A
Sbjct: 31 WYSSK---PSSKTEPKEAKVMPTDSMAASGRAGAGAAARP-ARVRPVTSSTRPLSNTTTA 86
Query: 429 HAQPSIHC*GACWP-SLRWSPCVELLLGC 346
A P + CW +++ C L+ C
Sbjct: 87 SAPPPLRSKATCWAWRMQFISCTAELISC 115
>UniRef50_Q69T50 Cluster: Putative uncharacterized protein
P0664C05.27; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0664C05.27 - Oryza sativa subsp. japonica (Rice)
Length = 443
Score = 33.9 bits (74), Expect = 3.9
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Frame = -3
Query: 264 LDRDAVHKHREMRG-----LTSAGRSSRGLGKGHRY--SQTKGGSRRAAWLRRNTLQ 115
LDR VH+ +R +SA R RG G HR S T G RRA LRR+TL+
Sbjct: 190 LDRSPVHRQHRLRRPCHGCASSARRRHRGDGPLHRSTSSLTHGRRRRARGLRRSTLR 246
>UniRef50_Q9UPT8 Cluster: Zinc finger CCCH domain-containing protein
C19orf7; n=20; Theria|Rep: Zinc finger CCCH
domain-containing protein C19orf7 - Homo sapiens (Human)
Length = 1303
Score = 33.1 bits (72), Expect = 6.7
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -3
Query: 249 VHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSR 148
++++R + +S GR SRG G+G+R ++GGSR
Sbjct: 224 LNQYRRAKEGSSRGRGSRGRGRGYRGRGSRGGSR 257
>UniRef50_UPI0000E8063D Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 350
Score = 32.7 bits (71), Expect = 8.9
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 312 PRGPV-TQGHSSRS*DQLDRDAVHKHREMRG 223
PRGPV T+GHS R DA +HR RG
Sbjct: 6 PRGPVGTEGHSRRRGRNAGPDAAEQHRRQRG 36
>UniRef50_A5NVT3 Cluster: ABC transporter related; n=3;
Bacteria|Rep: ABC transporter related - Methylobacterium
sp. 4-46
Length = 1677
Score = 32.7 bits (71), Expect = 8.9
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = -3
Query: 321 RGYPRGPVTQG-HSSR-S*DQLDRDAVHKHREMRGLTSAGRSSRGLGK--GHRYSQTKGG 154
R PRG Q H +R + Q DR H HR+ +G + GR R LG+ G R Q + G
Sbjct: 302 RAAPRGSQPQPRHGARQAPGQHDRGGAH-HRDPQGERAGGRGLRALGRHPGPR-PQRRAG 359
Query: 153 SRRAAWLRRN 124
+RR L R+
Sbjct: 360 ARRHLGLARH 369
>UniRef50_A5KZK6 Cluster: Rhs element Vgr protein:Gp5-like protein;
n=4; Vibrionales|Rep: Rhs element Vgr protein:Gp5-like
protein - Vibrionales bacterium SWAT-3
Length = 663
Score = 32.7 bits (71), Expect = 8.9
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -3
Query: 321 RGYPRGPVTQGHSSRS*DQLDRDAVHKHREMRGLTSAGRSSRGLGKGHRYSQTK 160
R P+G QG+ R DQ D++ V+ H E L S+ KG + +Q +
Sbjct: 465 RSTPKGSSKQGNELRFEDQKDKEQVYLHAEKDWLLDVNNDSQSTIKGMKKTQVE 518
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,648,169
Number of Sequences: 1657284
Number of extensions: 14083749
Number of successful extensions: 35678
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 34444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35669
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -