Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0754.Seq
(698 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094841-1|AAM11194.1| 204|Drosophila melanogaster RE01373p pro... 113 2e-25
AF030251-1|AAB84223.1| 204|Drosophila melanogaster ribosomal L1... 113 2e-25
AY075262-1|AAL68129.1| 656|Drosophila melanogaster AT22312p pro... 30 3.5
AE014298-2571|AAO41694.1| 592|Drosophila melanogaster CG5613-PB... 30 3.5
AE014298-2570|AAF48729.1| 655|Drosophila melanogaster CG5613-PA... 30 3.5
BT015281-1|AAT94510.1| 1489|Drosophila melanogaster LD08594p pro... 29 4.6
BT011124-1|AAR82791.1| 1489|Drosophila melanogaster LD09942p pro... 29 4.6
AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA ... 29 4.6
>AY094841-1|AAM11194.1| 204|Drosophila melanogaster RE01373p
protein.
Length = 204
Score = 113 bits (272), Expect = 2e-25
Identities = 56/90 (62%), Positives = 63/90 (70%)
Frame = -1
Query: 527 FRIRVRLVPASVQLLRVPLYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWV 348
+RIRVR + + YGKPKSHGVNQLKP R LQSIAEE L+SYW+
Sbjct: 62 YRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWI 121
Query: 347 AQDSSYKYFEVILVDPSHKAIRRDPKINWI 258
AQD+SYKYFEVIL+D H AIRRDPKINWI
Sbjct: 122 AQDASYKYFEVILIDTHHSAIRRDPKINWI 151
Score = 86.6 bits (205), Expect = 3e-17
Identities = 38/50 (76%), Positives = 44/50 (88%)
Frame = -3
Query: 249 VHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 100
VHKHRE+RGLTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N + RKR
Sbjct: 155 VHKHRELRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204
Score = 46.4 bits (105), Expect = 4e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -2
Query: 592 PRPTRPDKARRLGYRANQGYV 530
PRPTRPDKARRLGYRA QG+V
Sbjct: 40 PRPTRPDKARRLGYRAKQGFV 60
>AF030251-1|AAB84223.1| 204|Drosophila melanogaster ribosomal L15
(YL10) protein homologueprotein.
Length = 204
Score = 113 bits (272), Expect = 2e-25
Identities = 56/90 (62%), Positives = 63/90 (70%)
Frame = -1
Query: 527 FRIRVRLVPASVQLLRVPLYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWV 348
+RIRVR + + YGKPKSHGVNQLKP R LQSIAEE L+SYW+
Sbjct: 62 YRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWI 121
Query: 347 AQDSSYKYFEVILVDPSHKAIRRDPKINWI 258
AQD+SYKYFEVIL+D H AIRRDPKINWI
Sbjct: 122 AQDASYKYFEVILIDTHHSAIRRDPKINWI 151
Score = 86.6 bits (205), Expect = 3e-17
Identities = 38/50 (76%), Positives = 44/50 (88%)
Frame = -3
Query: 249 VHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 100
VHKHRE+RGLTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N + RKR
Sbjct: 155 VHKHRELRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204
Score = 46.4 bits (105), Expect = 4e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -2
Query: 592 PRPTRPDKARRLGYRANQGYV 530
PRPTRPDKARRLGYRA QG+V
Sbjct: 40 PRPTRPDKARRLGYRAKQGFV 60
>AY075262-1|AAL68129.1| 656|Drosophila melanogaster AT22312p
protein.
Length = 656
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 294 QGHSSRS*DQLDRDAVHKHREMRGLTSAGRSSRG 193
+GH RS Q+ R+ +HR GL GRS +G
Sbjct: 323 EGHLERSAQQVRREQSPRHRVFMGLDVFGRSRKG 356
>AE014298-2571|AAO41694.1| 592|Drosophila melanogaster CG5613-PB,
isoform B protein.
Length = 592
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 294 QGHSSRS*DQLDRDAVHKHREMRGLTSAGRSSRG 193
+GH RS Q+ R+ +HR GL GRS +G
Sbjct: 259 EGHLERSAQQVRREQSPRHRVFMGLDVFGRSRKG 292
>AE014298-2570|AAF48729.1| 655|Drosophila melanogaster CG5613-PA,
isoform A protein.
Length = 655
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 294 QGHSSRS*DQLDRDAVHKHREMRGLTSAGRSSRG 193
+GH RS Q+ R+ +HR GL GRS +G
Sbjct: 322 EGHLERSAQQVRREQSPRHRVFMGLDVFGRSRKG 355
>BT015281-1|AAT94510.1| 1489|Drosophila melanogaster LD08594p protein.
Length = 1489
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 297 TQGHSSRS*DQLDRDAVHKHREMRGLTSAGRSSRGLGKGHRYS-QTKGGS 151
T H +++ D+ RDA+ HR G ++ SR + + R S +++ GS
Sbjct: 1328 TSRHQTQAKDRYGRDAMRSHRSRSGRRNSRSFSRSVSRDSRVSLRSRSGS 1377
>BT011124-1|AAR82791.1| 1489|Drosophila melanogaster LD09942p protein.
Length = 1489
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 297 TQGHSSRS*DQLDRDAVHKHREMRGLTSAGRSSRGLGKGHRYS-QTKGGS 151
T H +++ D+ RDA+ HR G ++ SR + + R S +++ GS
Sbjct: 1328 TSRHQTQAKDRYGRDAMRSHRSRSGRRNSRSFSRSVSRDSRVSLRSRSGS 1377
>AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA
protein.
Length = 2296
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 297 TQGHSSRS*DQLDRDAVHKHREMRGLTSAGRSSRGLGKGHRYS-QTKGGS 151
T H +++ D+ RDA+ HR G ++ SR + + R S +++ GS
Sbjct: 1328 TSRHQTQAKDRYGRDAMRSHRSRSGRRNSRSFSRSVSRDSRVSLRSRSGS 1377
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,450,596
Number of Sequences: 53049
Number of extensions: 648975
Number of successful extensions: 1803
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1803
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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