Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0750.Seq
(748 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 33 1.1
AY210419-1|AAO34702.1| 3501|Homo sapiens CUB and sushi multiple ... 31 4.4
AB114605-1|BAC82444.1| 3667|Homo sapiens CSMD3 protein isoform 2... 31 4.4
AB114604-1|BAC82443.1| 3707|Homo sapiens CSMD3 protein isoform 1... 31 4.4
AB067481-1|BAB67787.2| 2977|Homo sapiens KIAA1894 protein protein. 31 4.4
X16896-1|CAA34773.1| 569|Homo sapiens protein ( Human mRNA for ... 30 7.7
M27492-1|AAA59137.1| 569|Homo sapiens IL1R protein. 30 7.7
BC075063-1|AAH75063.1| 569|Homo sapiens interleukin 1 receptor,... 30 7.7
BC075062-1|AAH75062.1| 569|Homo sapiens interleukin 1 receptor,... 30 7.7
BC067508-1|AAH67508.1| 569|Homo sapiens interleukin 1 receptor,... 30 7.7
BC067507-1|AAH67507.1| 569|Homo sapiens interleukin 1 receptor,... 30 7.7
BC067506-1|AAH67506.1| 569|Homo sapiens interleukin 1 receptor,... 30 7.7
AF531102-1|AAM88423.1| 569|Homo sapiens interleukin 1 receptor,... 30 7.7
AC007271-1|AAX81988.1| 569|Homo sapiens unknown protein. 30 7.7
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -1
Query: 484 YFSSLPPRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVA 341
+ ++ P S F+ + PS+ + + SPES P SPLPVT ++ +
Sbjct: 5621 WMTTPPVEETSSGFSLMSPSMTSPSPVSSTSPESIPSSPLPVTALLTS 5668
>AY210419-1|AAO34702.1| 3501|Homo sapiens CUB and sushi multiple
domains 3 protein.
Length = 3501
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -3
Query: 488 SLFFVTTSPCREWVICAPAAFLGCGSRFSGSLSG--IEP*FPVTRDNH 351
SL T R W P+ CG RF G SG + P +P DN+
Sbjct: 1250 SLLKCMTGERRAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNN 1297
>AB114605-1|BAC82444.1| 3667|Homo sapiens CSMD3 protein isoform 2
protein.
Length = 3667
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -3
Query: 488 SLFFVTTSPCREWVICAPAAFLGCGSRFSGSLSG--IEP*FPVTRDNH 351
SL T R W P+ CG RF G SG + P +P DN+
Sbjct: 1351 SLLKCMTGERRAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNN 1398
>AB114604-1|BAC82443.1| 3707|Homo sapiens CSMD3 protein isoform 1
protein.
Length = 3707
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -3
Query: 488 SLFFVTTSPCREWVICAPAAFLGCGSRFSGSLSG--IEP*FPVTRDNH 351
SL T R W P+ CG RF G SG + P +P DN+
Sbjct: 1391 SLLKCMTGERRAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNN 1438
>AB067481-1|BAB67787.2| 2977|Homo sapiens KIAA1894 protein protein.
Length = 2977
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -3
Query: 488 SLFFVTTSPCREWVICAPAAFLGCGSRFSGSLSG--IEP*FPVTRDNH 351
SL T R W P+ CG RF G SG + P +P DN+
Sbjct: 731 SLLKCMTGERRAWDYPLPSCIAECGGRFKGESSGRILSPGYPFPYDNN 778
>X16896-1|CAA34773.1| 569|Homo sapiens protein ( Human mRNA for
interleukin-1 receptor (fibroblast type). ).
Length = 569
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 697 VQVSPAECGAPTSXGAQMHLRAFLTATIFSIRYWSWN 587
V VSPA G+Q+ L +T + I YW WN
Sbjct: 227 VIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWN 263
>M27492-1|AAA59137.1| 569|Homo sapiens IL1R protein.
Length = 569
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 697 VQVSPAECGAPTSXGAQMHLRAFLTATIFSIRYWSWN 587
V VSPA G+Q+ L +T + I YW WN
Sbjct: 227 VIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWN 263
>BC075063-1|AAH75063.1| 569|Homo sapiens interleukin 1 receptor,
type I, precursor protein.
Length = 569
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 697 VQVSPAECGAPTSXGAQMHLRAFLTATIFSIRYWSWN 587
V VSPA G+Q+ L +T + I YW WN
Sbjct: 227 VIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWN 263
>BC075062-1|AAH75062.1| 569|Homo sapiens interleukin 1 receptor,
type I, precursor protein.
Length = 569
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 697 VQVSPAECGAPTSXGAQMHLRAFLTATIFSIRYWSWN 587
V VSPA G+Q+ L +T + I YW WN
Sbjct: 227 VIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWN 263
>BC067508-1|AAH67508.1| 569|Homo sapiens interleukin 1 receptor,
type I protein.
Length = 569
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 697 VQVSPAECGAPTSXGAQMHLRAFLTATIFSIRYWSWN 587
V VSPA G+Q+ L +T + I YW WN
Sbjct: 227 VIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWN 263
>BC067507-1|AAH67507.1| 569|Homo sapiens interleukin 1 receptor,
type I protein.
Length = 569
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 697 VQVSPAECGAPTSXGAQMHLRAFLTATIFSIRYWSWN 587
V VSPA G+Q+ L +T + I YW WN
Sbjct: 227 VIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWN 263
>BC067506-1|AAH67506.1| 569|Homo sapiens interleukin 1 receptor,
type I protein.
Length = 569
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 697 VQVSPAECGAPTSXGAQMHLRAFLTATIFSIRYWSWN 587
V VSPA G+Q+ L +T + I YW WN
Sbjct: 227 VIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWN 263
>AF531102-1|AAM88423.1| 569|Homo sapiens interleukin 1 receptor,
type I protein.
Length = 569
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 697 VQVSPAECGAPTSXGAQMHLRAFLTATIFSIRYWSWN 587
V VSPA G+Q+ L +T + I YW WN
Sbjct: 227 VIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWN 263
>AC007271-1|AAX81988.1| 569|Homo sapiens unknown protein.
Length = 569
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 697 VQVSPAECGAPTSXGAQMHLRAFLTATIFSIRYWSWN 587
V VSPA G+Q+ L +T + I YW WN
Sbjct: 227 VIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWN 263
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,990,325
Number of Sequences: 237096
Number of extensions: 2588051
Number of successful extensions: 6421
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6421
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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