Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0749.Seq
(797 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 151 5e-37
03_01_0547 + 4093196-4093657,4094267-4095148 151 5e-37
03_01_0544 + 4082528-4082989,4083585-4084466 151 5e-37
03_01_0543 + 4076981-4077442,4078145-4079026 151 5e-37
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 99 4e-21
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 95 4e-20
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 95 4e-20
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 93 2e-19
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 92 5e-19
02_04_0462 + 23131433-23132836 69 3e-12
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 68 1e-11
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 37 0.021
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 33 0.26
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 33 0.26
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 32 0.61
03_05_0511 + 25056018-25059107 32 0.61
02_04_0148 - 20198407-20201424 31 0.80
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.80
04_01_0103 + 1082077-1082167,1083037-1085477 31 1.1
02_04_0017 + 18937774-18937864,18938505-18940945 31 1.1
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 31 1.4
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 31 1.4
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 30 1.9
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 30 1.9
09_01_0015 + 370242-370306,370429-370497,371087-371161,371558-37... 30 2.5
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 30 2.5
01_06_0662 + 30987187-30987277,30987825-30990214 30 2.5
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 3.2
02_04_0064 - 19375497-19375580,19375659-19375733,19376359-193765... 29 4.3
01_01_0016 - 88825-90411 29 4.3
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 28 7.5
11_01_0658 + 5342508-5343602,5343697-5343764,5343994-5344042,534... 28 9.9
11_01_0657 + 5322295-5323367,5323436-5323555,5323743-5323791,532... 28 9.9
09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,851... 28 9.9
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 9.9
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 28 9.9
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 151 bits (367), Expect = 5e-37
Identities = 71/84 (84%), Positives = 77/84 (91%)
Frame = +3
Query: 258 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 437
ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKD 130
Query: 438 GQTREHALLAFTLGVKQLIVGVNK 509
GQTREHALLAFTLGVKQ+I NK
Sbjct: 131 GQTREHALLAFTLGVKQMICCCNK 154
Score = 134 bits (325), Expect = 6e-32
Identities = 63/69 (91%), Positives = 64/69 (92%)
Frame = +1
Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 228
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 229 DKLKAERER 255
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 78.2 bits (184), Expect = 7e-15
Identities = 33/52 (63%), Positives = 43/52 (82%)
Frame = +2
Query: 506 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 661
+MD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E S
Sbjct: 154 KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERS 205
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 151 bits (367), Expect = 5e-37
Identities = 71/84 (84%), Positives = 77/84 (91%)
Frame = +3
Query: 258 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 437
ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKD 130
Query: 438 GQTREHALLAFTLGVKQLIVGVNK 509
GQTREHALLAFTLGVKQ+I NK
Sbjct: 131 GQTREHALLAFTLGVKQMICCCNK 154
Score = 134 bits (325), Expect = 6e-32
Identities = 63/69 (91%), Positives = 64/69 (92%)
Frame = +1
Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 228
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 229 DKLKAERER 255
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 78.2 bits (184), Expect = 7e-15
Identities = 33/52 (63%), Positives = 43/52 (82%)
Frame = +2
Query: 506 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 661
+MD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E S
Sbjct: 154 KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERS 205
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 151 bits (367), Expect = 5e-37
Identities = 71/84 (84%), Positives = 77/84 (91%)
Frame = +3
Query: 258 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 437
ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKD 130
Query: 438 GQTREHALLAFTLGVKQLIVGVNK 509
GQTREHALLAFTLGVKQ+I NK
Sbjct: 131 GQTREHALLAFTLGVKQMICCCNK 154
Score = 134 bits (325), Expect = 6e-32
Identities = 63/69 (91%), Positives = 64/69 (92%)
Frame = +1
Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 228
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 229 DKLKAERER 255
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 78.2 bits (184), Expect = 7e-15
Identities = 33/52 (63%), Positives = 43/52 (82%)
Frame = +2
Query: 506 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 661
+MD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E S
Sbjct: 154 KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERS 205
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 151 bits (367), Expect = 5e-37
Identities = 71/84 (84%), Positives = 77/84 (91%)
Frame = +3
Query: 258 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 437
ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+
Sbjct: 71 ITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKD 130
Query: 438 GQTREHALLAFTLGVKQLIVGVNK 509
GQTREHALLAFTLGVKQ+I NK
Sbjct: 131 GQTREHALLAFTLGVKQMICCCNK 154
Score = 134 bits (325), Expect = 6e-32
Identities = 63/69 (91%), Positives = 64/69 (92%)
Frame = +1
Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 228
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 229 DKLKAERER 255
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 78.2 bits (184), Expect = 7e-15
Identities = 33/52 (63%), Positives = 43/52 (82%)
Frame = +2
Query: 506 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 661
+MD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E S
Sbjct: 154 KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERS 205
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 99.1 bits (236), Expect = 4e-21
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = +3
Query: 261 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 440
T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + G
Sbjct: 18 TVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGG 77
Query: 441 QTREHALLAFTLGVKQLIVGVNK 509
QTREH LLA TLGV +L+V +NK
Sbjct: 78 QTREHVLLAKTLGVSKLVVVINK 100
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 506 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN-PAAVAFVPISGWHGDNM 649
+MD + +S+ R++EI+ ++ ++K GYN V F+PISG G NM
Sbjct: 100 KMDESTVGWSKERYDEIEGKMVPFLKSSGYNVKKDVHFLPISGLLGTNM 148
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 95.5 bits (227), Expect = 4e-20
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 5/89 (5%)
Frame = +3
Query: 258 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 437
+T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+
Sbjct: 311 VTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGE 370
Query: 438 -----GQTREHALLAFTLGVKQLIVGVNK 509
GQT+EHA L + GV+QLIV VNK
Sbjct: 371 GGKSVGQTKEHAQLIRSFGVEQLIVAVNK 399
Score = 81.0 bits (191), Expect = 1e-15
Identities = 34/64 (53%), Positives = 47/64 (73%)
Frame = +1
Query: 64 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 243
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 244 ERER 255
ERER
Sbjct: 306 ERER 309
Score = 35.1 bits (77), Expect = 0.065
Identities = 12/42 (28%), Positives = 27/42 (64%)
Frame = +2
Query: 530 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 655
YS+ RFE IK ++ S+++ + ++V ++P+S N+++
Sbjct: 405 YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIK 446
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 95.5 bits (227), Expect = 4e-20
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 5/89 (5%)
Frame = +3
Query: 258 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 437
+T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+
Sbjct: 311 VTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGE 370
Query: 438 -----GQTREHALLAFTLGVKQLIVGVNK 509
GQT+EHA L + GV+QLIV VNK
Sbjct: 371 GGKSVGQTKEHAQLIRSFGVEQLIVAVNK 399
Score = 81.0 bits (191), Expect = 1e-15
Identities = 34/64 (53%), Positives = 47/64 (73%)
Frame = +1
Query: 64 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 243
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 244 ERER 255
ERER
Sbjct: 306 ERER 309
Score = 35.1 bits (77), Expect = 0.065
Identities = 12/42 (28%), Positives = 27/42 (64%)
Frame = +2
Query: 530 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 655
YS+ RFE IK ++ S+++ + ++V ++P+S N+++
Sbjct: 405 YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIK 446
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 93.5 bits (222), Expect = 2e-19
Identities = 46/87 (52%), Positives = 59/87 (67%), Gaps = 4/87 (4%)
Frame = +3
Query: 261 TIDIALWKFETSKYYVTIIDAP----GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 428
T+++ FET TI+DAP GH+ ++ NMI+G SQAD VL+++A GEFE G
Sbjct: 59 TVEVGRAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETGY 118
Query: 429 SKNGQTREHALLAFTLGVKQLIVGVNK 509
K GQTREH LLA TLGV +LIV +NK
Sbjct: 119 EKGGQTREHVLLAKTLGVAKLIVVINK 145
Score = 51.2 bits (117), Expect = 9e-07
Identities = 21/51 (41%), Positives = 36/51 (70%)
Frame = +1
Query: 97 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 249
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 54
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 506 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN-PAAVAFVPISGWHGDNM 649
+MD +S+ R++EI+ ++ +++ GYN V F+PISG G NM
Sbjct: 145 KMDEPTVKWSKERYDEIESKMVPFLRSSGYNVKKDVHFLPISGLLGSNM 193
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 91.9 bits (218), Expect = 5e-19
Identities = 41/86 (47%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = +3
Query: 258 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 437
IT+ + + F+T Y+V ++D+PGH+DF+ NMI+G +Q+D A+L++ A G FEAG+ N
Sbjct: 298 ITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQSDAAILVIDASIGSFEAGMGIN 357
Query: 438 --GQTREHALLAFTLGVKQLIVGVNK 509
GQT+EH+ L + GV LIV VNK
Sbjct: 358 GIGQTKEHSQLVRSFGVDNLIVVVNK 383
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = +2
Query: 506 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML 652
+MDS E YS+ RF IK ++ ++++ GY +AVA+VPIS +N++
Sbjct: 383 KMDSVE--YSKERFNFIKSQLGAFLRSCGYKDSAVAWVPISAMENENLM 429
Score = 33.5 bits (73), Expect = 0.20
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 193 MGKGSFKYAWVLDKLKAERER 255
+GKGSF YAW +D+ ERER
Sbjct: 276 IGKGSFAYAWAMDESADERER 296
>02_04_0462 + 23131433-23132836
Length = 467
Score = 69.3 bits (162), Expect = 3e-12
Identities = 35/84 (41%), Positives = 52/84 (61%)
Frame = +3
Query: 258 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 437
ITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 119 ITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP------ 172
Query: 438 GQTREHALLAFTLGVKQLIVGVNK 509
QT+EH LLA +GV +++V +NK
Sbjct: 173 -QTKEHILLAKQVGVPKIVVFLNK 195
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 46 KMGKEKTHINIVVIGHVDSGKSTTTGHL---IYKCGGIDKRTIEKFEKEAQEMGKG 204
K + K H+NI IGHVD GK+T T L + GG + ++ + +E +G
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARG 118
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 67.7 bits (158), Expect = 1e-11
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +3
Query: 258 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 437
ITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+A G
Sbjct: 116 ITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMP------ 169
Query: 438 GQTREHALLAFTLGVKQLIVGVNK 509
QT+EH LLA +GV L+ +NK
Sbjct: 170 -QTKEHILLARQVGVPSLVCFLNK 192
Score = 34.7 bits (76), Expect = 0.086
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 55 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 204
+ K H+N+ IGHVD GK+T T ++ + G ++ +K +E +G
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARG 115
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 36.7 bits (81), Expect = 0.021
Identities = 26/89 (29%), Positives = 38/89 (42%)
Frame = +3
Query: 258 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 437
ITI A + Y V IID PGH DF + D A+L++ + G I+ +
Sbjct: 122 ITIQSAATYCTWNGYQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVD 181
Query: 438 GQTREHALLAFTLGVKQLIVGVNKWIPLN 524
Q R + + K +G + W LN
Sbjct: 182 RQMRRYEIPRVAFINKLDRMGADPWKVLN 210
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 73 NIVVIGHVDSGKSTTTGHLIYKCGGI 150
NI + H+DSGK+T T ++Y G I
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRI 95
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +3
Query: 303 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 482
+V+ +D PGH + M+ G + D A+L++AA QT EH + +
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANES------CPQPQTSEHLAAVEIMRL 202
Query: 483 KQLIVGVNK 509
+ +I+ NK
Sbjct: 203 QHIIILQNK 211
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 33.1 bits (72), Expect = 0.26
Identities = 38/133 (28%), Positives = 51/133 (38%)
Frame = +3
Query: 300 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 479
Y I+D PGH +F M AD AVL+V A G+ N E A+ T
Sbjct: 219 YLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAA-----EGVMVN---TERAIRHATQE 270
Query: 480 VKQLIVGVNKWIPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSL 659
++V +NK L P + K HT A L+S + GT+ +
Sbjct: 271 RLPIVVVINKVDRLITELKLPP-NDAYFKLRHTLE--AINDLISSCSTTVGGTQLVDPAA 327
Query: 660 HQNALXQGMAGWS 698
G AGWS
Sbjct: 328 GNVCFASGSAGWS 340
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 31.9 bits (69), Expect = 0.61
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 306 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 410
+T +D PGH F G + D VL+VAA G
Sbjct: 247 ITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDG 281
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.61
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 73 NIVVIGHVDSGKSTTTGHLIYKCG 144
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 258 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 410
IT+ A + V +ID+PGH DF + + +D A+++V A G
Sbjct: 61 ITMKSAAVVLHHGGHRVNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEG 111
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 31.5 bits (68), Expect = 0.80
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 306 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 410
V +ID+PGH DF + AD A+++V A G
Sbjct: 89 VHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEG 123
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 73 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 195
N ++ HVD GK++ HLI G ++R E+ A+ M
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSARVM 57
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.80
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 73 NIVVIGHVDSGKSTTTGHLIYKCG 144
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 258 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 410
ITI + + + ++D PGH DF + + AVL+V AG G
Sbjct: 109 ITIASKVTSVSWKENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEG 159
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 22 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 144
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 294 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 395
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 22 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 144
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 294 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 395
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 30.7 bits (66), Expect = 1.4
Identities = 26/93 (27%), Positives = 41/93 (44%)
Frame = +3
Query: 288 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 467
+ Y + +ID PGH DF + + A+L+V A G QT + LA
Sbjct: 130 DAPSYLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQG-------VQAQTIANFYLA 182
Query: 468 FTLGVKQLIVGVNKWIPLNHHTVSPDLRKSRRK 566
F + +I +NK ++ T PD K++ K
Sbjct: 183 FESNL-SIIPVINK---IDQPTADPDNVKAQLK 211
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/61 (39%), Positives = 28/61 (45%)
Frame = +1
Query: 73 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 252
N +I HVD GKST L+ G I K G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 253 R 255
R
Sbjct: 103 R 103
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 67 HINIVVIGHVDSGKSTTTGHLIYKCG 144
HI+ V++ H+D+GK+TTT ++Y G
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTG 129
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 144
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +3
Query: 267 DIALWKFETSK----YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 395
D AL FE + Y + +ID+PGH DF + D A+++V
Sbjct: 83 DAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITDGALVVV 129
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 312 IIDAPGHRDFIKNMITGTSQADCAVLIV 395
+ID PGH+ F G+S D A+L+V
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILVV 516
>09_01_0015 +
370242-370306,370429-370497,371087-371161,371558-371591,
371659-373132,373193-373310,373374-373419
Length = 626
Score = 29.9 bits (64), Expect = 2.5
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = +1
Query: 136 KCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERVSQSILLSGSSK---LASTM 306
KC I + F K+A + W + KLK ++ ++IL GS+ L +T+
Sbjct: 302 KCMDISQAEFFPFSKKAIFLQNDVLNAIWSIQKLKKGDLKLLRAILCQGSNDEMLLKTTV 361
Query: 307 LPSLMLLDTEISSRT*SQEPLRLIALCSS*LPVPVNSKL 423
L+ E E LR IALC+ +P+ K+
Sbjct: 362 RRYLIDCLFECDEGDLPDEALRAIALCNQ---MPLRQKI 397
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 73 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 171
N +I H+D GKST L+ G + KR +++
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQ 111
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 300 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 410
Y + +ID PGH DF + + + A+L+V A G
Sbjct: 143 YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 179
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 144
M K+ N+ V+ HVD GKST T L+ G
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 294 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 395
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 312 IIDAPGHRDFIKNMITGTSQADCAVLIV 395
+ID PGH F G+S D A+L+V
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILVV 793
>02_04_0064 -
19375497-19375580,19375659-19375733,19376359-19376514,
19377016-19377093,19377328-19377428,19377570-19377717,
19378172-19378316,19378803-19378906,19380257-19380385,
19380526-19380636,19380734-19380863,19381915-19382034,
19382360-19382481,19382965-19383048,19383241-19383357,
19383442-19383522,19384138-19384197,19384398-19384440,
19384528-19384626,19385353-19385564,19385964-19386091,
19386246-19386396
Length = 825
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = +2
Query: 509 MDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAV------AFVPISGWHGDNMLEPSPK 667
M STEP + + + EV IKK+GYN + A+ G+H N PS +
Sbjct: 322 MSSTEPKINT--YANFRDEVLPRIKKLGYNAVQIMAIQEHAYYGSFGYHVTNFFAPSSR 378
>01_01_0016 - 88825-90411
Length = 528
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 497 YDELFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSA 378
YD F + +G+L L+V+ F+ TGT + D+H A
Sbjct: 241 YDAAF--RDHARRGLLPALSVIEPRYFDLTGTPADDDHPA 278
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 312 IIDAPGHRDFIKNMITGTSQADCAVLIV 395
+ID PGH F G S D AV++V
Sbjct: 507 VIDTPGHESFSNMRSRGMSLCDIAVVVV 534
>11_01_0658 +
5342508-5343602,5343697-5343764,5343994-5344042,
5344217-5344333,5344438-5344506,5344631-5344725,
5345580-5345658,5346499-5346563,5347368-5347461,
5347675-5347744,5348363-5349357
Length = 931
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 699 GSNLPSLXPRHFGEGSNMLSP 637
GSN+ SL R FG G +ML P
Sbjct: 68 GSNVSSLLNRPFGNGGHMLGP 88
>11_01_0657 +
5322295-5323367,5323436-5323555,5323743-5323791,
5323968-5324084,5324200-5324268,5324394-5324488,
5325183-5325521,5327043-5327084,5327814-5327907,
5328121-5328190,5328719-5329677
Length = 1008
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 699 GSNLPSLXPRHFGEGSNMLSP 637
GSN+ SL R FG G +ML P
Sbjct: 60 GSNVSSLLNRPFGNGGHMLGP 80
>09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,
8511209-8511523,8511576-8511682,8512559-8512629,
8512952-8513029,8513390-8513454,8514224-8514274,
8514373-8514414,8514785-8515105,8515154-8517880
Length = 1480
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 471 TLGVKQLIVGVNKWIPLNH-HTVSPDLRKSRRKYPHTSRRLATTQLLSLS 617
TL V+ L+ W+P NH H V P LR + H RL + L +L+
Sbjct: 1336 TLVVQNLVAWEEWWLPENHPHCVFPLLRTIDIRGSHKLVRLPLSNLHALA 1385
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 61 KTHINIVVIGHVDSG 105
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 428 DTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 294
D F+G + + I LRG+ +HVLDE RS++D VL+
Sbjct: 350 DKLIHFSGV-AMGQACTIVLRGASEHVLDE--AERSLHDALCVLS 391
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,387,280
Number of Sequences: 37544
Number of extensions: 498300
Number of successful extensions: 1501
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1492
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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