Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0749.Seq
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 165 2e-41
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 165 2e-41
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 163 1e-40
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 148 5e-36
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 3e-33
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 114 6e-26
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 114 6e-26
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 102 3e-22
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 71 7e-13
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 71 7e-13
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 66 3e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 66 3e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 66 3e-11
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.006
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 35 0.078
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.10
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.31
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.31
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 32 0.41
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.96
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.96
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.96
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 1.3
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 1.3
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 2.2
AL034365-2|CAA22257.1| 366|Caenorhabditis elegans Hypothetical ... 30 2.2
AF022984-10|AAB69958.1| 358|Caenorhabditis elegans Hypothetical... 30 2.2
Z81139-5|CAB03481.2| 359|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.9
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.9
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.9
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.9
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.9
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.9
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z70718-9|CAA94678.2| 371|Caenorhabditis elegans Hypothetical pr... 28 8.9
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 165 bits (402), Expect = 2e-41
Identities = 82/119 (68%), Positives = 93/119 (78%)
Frame = +3
Query: 153 QTYHREVREGGPGNG*RILQICLGIGQTKXXXXXXITIDIALWKFETSKYYVTIIDAPGH 332
+ + +E +E G G+ + + + K ITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 333 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 509
RDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NK
Sbjct: 96 RDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNK 154
Score = 148 bits (358), Expect = 5e-36
Identities = 68/69 (98%), Positives = 68/69 (98%)
Frame = +1
Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 228
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 229 DKLKAERER 255
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 85.4 bits (202), Expect = 4e-17
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +2
Query: 506 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 661
+MDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S
Sbjct: 154 KMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVS 205
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 165 bits (402), Expect = 2e-41
Identities = 82/119 (68%), Positives = 93/119 (78%)
Frame = +3
Query: 153 QTYHREVREGGPGNG*RILQICLGIGQTKXXXXXXITIDIALWKFETSKYYVTIIDAPGH 332
+ + +E +E G G+ + + + K ITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 333 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 509
RDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NK
Sbjct: 96 RDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNK 154
Score = 148 bits (358), Expect = 5e-36
Identities = 68/69 (98%), Positives = 68/69 (98%)
Frame = +1
Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 228
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 229 DKLKAERER 255
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 85.4 bits (202), Expect = 4e-17
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +2
Query: 506 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 661
+MDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S
Sbjct: 154 KMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVS 205
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 163 bits (397), Expect = 1e-40
Identities = 95/166 (57%), Positives = 108/166 (65%)
Frame = +3
Query: 153 QTYHREVREGGPGNG*RILQICLGIGQTKXXXXXXITIDIALWKFETSKYYVTIIDAPGH 332
+ + +E +E G G+ + + + K ITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 333 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKW 512
RDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQL
Sbjct: 96 RDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQL------- 148
Query: 513 IPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLDGTETTC 650
+ L T SPD +SRR T Q L D TETTC
Sbjct: 149 VSLRSPTRSPD----------SSRRSDTIQRLFHLSQSPDSTETTC 184
Score = 148 bits (358), Expect = 5e-36
Identities = 68/69 (98%), Positives = 68/69 (98%)
Frame = +1
Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 228
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 229 DKLKAERER 255
DKLKAERER
Sbjct: 61 DKLKAERER 69
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 148 bits (358), Expect = 5e-36
Identities = 68/69 (98%), Positives = 68/69 (98%)
Frame = +1
Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 228
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 229 DKLKAERER 255
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 101 bits (242), Expect = 6e-22
Identities = 49/82 (59%), Positives = 60/82 (73%)
Frame = +3
Query: 153 QTYHREVREGGPGNG*RILQICLGIGQTKXXXXXXITIDIALWKFETSKYYVTIIDAPGH 332
+ + +E +E G G+ + + + K ITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 333 RDFIKNMITGTSQADCAVLIVA 398
RDFIKNMITGTSQADCAVL+VA
Sbjct: 96 RDFIKNMITGTSQADCAVLVVA 117
Score = 85.4 bits (202), Expect = 4e-17
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +2
Query: 506 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 661
+MDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S
Sbjct: 120 KMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVS 171
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 3e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +1
Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 228
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 229 DKLKAER 249
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 114 bits (275), Expect = 6e-26
Identities = 54/95 (56%), Positives = 67/95 (70%)
Frame = +3
Query: 225 IGQTKXXXXXXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 404
+ +T+ +T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A
Sbjct: 223 LDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNAT 282
Query: 405 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 509
TGEFE G GQT+EHALL +LGV QLIV VNK
Sbjct: 283 TGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNK 317
Score = 85.0 bits (201), Expect = 6e-17
Identities = 37/66 (56%), Positives = 49/66 (74%)
Frame = +1
Query: 58 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 237
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 238 KAERER 255
+ ERER
Sbjct: 227 EEERER 232
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/43 (34%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +2
Query: 530 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLE 655
+S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++
Sbjct: 323 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK 363
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 114 bits (275), Expect = 6e-26
Identities = 54/95 (56%), Positives = 67/95 (70%)
Frame = +3
Query: 225 IGQTKXXXXXXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 404
+ +T+ +T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A
Sbjct: 241 LDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNAT 300
Query: 405 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 509
TGEFE G GQT+EHALL +LGV QLIV VNK
Sbjct: 301 TGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNK 335
Score = 85.0 bits (201), Expect = 6e-17
Identities = 37/66 (56%), Positives = 49/66 (74%)
Frame = +1
Query: 58 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 237
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 238 KAERER 255
+ ERER
Sbjct: 245 EEERER 250
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/43 (34%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +2
Query: 530 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLE 655
+S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++
Sbjct: 341 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK 381
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 102 bits (244), Expect = 3e-22
Identities = 51/119 (42%), Positives = 72/119 (60%)
Frame = +3
Query: 153 QTYHREVREGGPGNG*RILQICLGIGQTKXXXXXXITIDIALWKFETSKYYVTIIDAPGH 332
+ Y RE +E G + L C+ + T+++ FET K + TI+DAPGH
Sbjct: 142 EKYEREAKEKGRESW--YLSWCMDTNDEEREKGK--TVEVGRAYFETEKRHFTILDAPGH 197
Query: 333 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 509
+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH++L T GVK L++ VNK
Sbjct: 198 KSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVKHLVILVNK 256
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/68 (50%), Positives = 49/68 (72%)
Frame = +1
Query: 52 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 231
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 232 KLKAERER 255
ERE+
Sbjct: 164 TNDEEREK 171
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +2
Query: 506 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHG 640
+MD + E RF+EI+ +++ +++K+G+NP + +VP SG G
Sbjct: 256 KMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTG 301
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 71.3 bits (167), Expect = 7e-13
Identities = 41/95 (43%), Positives = 55/95 (57%)
Frame = +3
Query: 225 IGQTKXXXXXXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 404
I + K ITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 405 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 509
G E QT+EH +LA +GVK + + +NK
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINK 170
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 61 KTHINIVVIGHVDSGKSTTT 120
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 71.3 bits (167), Expect = 7e-13
Identities = 41/95 (43%), Positives = 55/95 (57%)
Frame = +3
Query: 225 IGQTKXXXXXXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 404
I + K ITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 405 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 509
G E QT+EH +LA +GVK + + +NK
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINK 170
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 61 KTHINIVVIGHVDSGKSTTT 120
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 66.1 bits (154), Expect = 3e-11
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +3
Query: 258 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 437
ITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 98 ITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------ 151
Query: 438 GQTREHALLAFTLGV--KQLIVGVNK 509
QTREH LLA +GV ++V +NK
Sbjct: 152 -QTREHLLLARQVGVPLDNIVVFMNK 176
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 55 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 225
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 226 LDKLKAER 249
L+ A+R
Sbjct: 105 LEYETAKR 112
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 66.1 bits (154), Expect = 3e-11
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +3
Query: 258 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 437
ITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 99 ITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------ 152
Query: 438 GQTREHALLAFTLGV--KQLIVGVNK 509
QTREH LLA +GV ++V +NK
Sbjct: 153 -QTREHLLLARQVGVPLDNIVVFMNK 177
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 55 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 225
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 226 LDKLKAER 249
L+ A+R
Sbjct: 106 LEYETAKR 113
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 66.1 bits (154), Expect = 3e-11
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +3
Query: 258 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 437
ITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 99 ITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------ 152
Query: 438 GQTREHALLAFTLGV--KQLIVGVNK 509
QTREH LLA +GV ++V +NK
Sbjct: 153 -QTREHLLLARQVGVPLDNIVVFMNK 177
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 55 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 225
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 226 LDKLKAER 249
L+ A+R
Sbjct: 106 LEYETAKR 113
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/86 (29%), Positives = 43/86 (50%)
Frame = +3
Query: 306 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 485
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 486 QLIVGVNKWIPLNHHTVSPDLRKSRR 563
++I+ +NK +S +K R+
Sbjct: 127 RVIIVLNKCDLAEKSKISESAKKVRK 152
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 70 INIVVIGHVDSGKSTTT 120
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 38.3 bits (85), Expect = 0.006
Identities = 32/85 (37%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 ITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 434
IT I + E +K VT +D PGH F G AD VL+VAA G E
Sbjct: 189 ITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE----- 243
Query: 435 NGQTREHALLAFTLGVKQLIVGVNK 509
QT + A V QL+V VNK
Sbjct: 244 --QTAQSIKFAKDANV-QLVVAVNK 265
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 34.7 bits (76), Expect = 0.078
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 514 IHLFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 380
++LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 11 LNLFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 73 NIVVIGHVDSGKSTTTGHLIYKCGGI 150
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 73 NIVVIGHVDSGKSTTTGHLIYKCGGID 153
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 144
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 261 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 410
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 49 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 144
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 261 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 410
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 73 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 189
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
Score = 31.9 bits (69), Expect = 0.55
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +3
Query: 300 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 479
Y + +ID PGH DF + + D +L+VAA G QT + LAF
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKN 154
Query: 480 VKQLIVGVNK 509
+ Q+I +NK
Sbjct: 155 I-QIIPVINK 163
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 25 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 135
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 25 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 135
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.96
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +3
Query: 303 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 482
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 483 KQLIVGVNK 509
L++ NK
Sbjct: 182 NHLMILQNK 190
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 264 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 410
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 189 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 264 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 410
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 64 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 312 IIDAPGHRDFIKNMITGTSQADCAVLIV 395
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AL034365-2|CAA22257.1| 366|Caenorhabditis elegans Hypothetical
protein Y69E1A.2 protein.
Length = 366
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 700 VREGKA*PENAXLKPLDAXLGTLPGPN 780
+REG A P +K LD L TLPG N
Sbjct: 194 IREGDAWPTRQLVKALDKTLDTLPGVN 220
>AF022984-10|AAB69958.1| 358|Caenorhabditis elegans Hypothetical
protein ZK488.1 protein.
Length = 358
Score = 29.9 bits (64), Expect = 2.2
Identities = 33/123 (26%), Positives = 54/123 (43%)
Frame = +3
Query: 276 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 455
++KFE+S + +T + K ITGT VL+V+ +F K+ Q
Sbjct: 104 VYKFESSLHRLTFGLTKSRTEDYKTKITGTLGKLQIVLVVSEAFWKFLNKRYKSAQIFFA 163
Query: 456 ALLAFTLGVKQLIVGVNKWIPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLDG 635
F L + + I + W L+ H+ + RKS YP+ A TQ++S +D
Sbjct: 164 FFPNFQLKILECIWHI--WATLDRHSATAVYRKS---YPNA----APTQIVSRRGVLMDL 214
Query: 636 TET 644
+T
Sbjct: 215 AKT 217
>Z81139-5|CAB03481.2| 359|Caenorhabditis elegans Hypothetical
protein W05H5.6 protein.
Length = 359
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +1
Query: 208 FKYAWVLDKLKAERERVSQSILLSGSSKLASTMLPSLMLLDTEISS 345
+ Y+W+ L ERV S+L+ ++P+++L+ ++ S
Sbjct: 134 YMYSWIFGVLTVAVERVIASVLIENYESNTQNLMPAILLIISQFLS 179
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 151 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 252
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 151 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 252
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 570 PHTSRRLATTQLLSLSCPFLD 632
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 570 PHTSRRLATTQLLSLSCPFLD 632
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 570 PHTSRRLATTQLLSLSCPFLD 632
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 570 PHTSRRLATTQLLSLSCPFLD 632
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 70 INIVVIGHVDSGKSTTT 120
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 306 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 401
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z70718-9|CAA94678.2| 371|Caenorhabditis elegans Hypothetical
protein C04G2.9 protein.
Length = 371
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 700 VREGKA*PENAXLKPLDAXLGTLPGPN 780
+REG P +K LD L TLPG N
Sbjct: 199 IREGDPWPTRQLVKALDKTLDTLPGVN 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,318,023
Number of Sequences: 27780
Number of extensions: 398148
Number of successful extensions: 1220
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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