Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0748.Seq
(698 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 184 1e-46
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 184 1e-46
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 184 1e-46
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 184 1e-46
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 184 1e-46
AY118799-1|AAM50659.1| 171|Drosophila melanogaster GH19411p pro... 29 6.1
AY089579-1|AAL90317.1| 911|Drosophila melanogaster RE11181p pro... 29 6.1
AE014297-3664|AAF56360.2| 911|Drosophila melanogaster CG31121-P... 29 6.1
AE014297-3663|AAF56359.2| 911|Drosophila melanogaster CG31121-P... 29 6.1
BT028842-1|ABI34223.2| 274|Drosophila melanogaster RT01105p pro... 29 8.0
AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2 pr... 29 8.0
AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon prot... 29 8.0
AE014297-2157|AAF55280.1| 279|Drosophila melanogaster CG5952-PA... 29 8.0
AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB... 29 8.0
AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA... 29 8.0
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 184 bits (448), Expect = 1e-46
Identities = 96/139 (69%), Positives = 103/139 (74%)
Frame = -3
Query: 672 LFAKEKXXKLXSIXLFSLPIKEFEDH*FLPRPVPE**GSKDHACTETNTCRTAHTFKAFV 493
L + K L I L+SLPIKEFE F + K + FKAFV
Sbjct: 52 LVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFV 111
Query: 492 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSLLPVRRGYWGNKIGKPHTVPCKVTGKC 313
AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIGKPHTVPCKVTGKC
Sbjct: 112 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKC 171
Query: 312 GSVTVRLIPAPRGTGIVSA 256
GSV+VRLIPAPRGTGIVSA
Sbjct: 172 GSVSVRLIPAPRGTGIVSA 190
Score = 79.4 bits (187), Expect = 4e-15
Identities = 35/61 (57%), Positives = 43/61 (70%)
Frame = -2
Query: 253 VPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSE 74
VP+KLL MAG++DCYTSARGSTGTLGNF YLTPDLW+++PL +PY
Sbjct: 192 VPRKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQA 251
Query: 73 F 71
+
Sbjct: 252 Y 252
Score = 59.3 bits (137), Expect = 5e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -1
Query: 611 KNSKIIDFFLGPSLNDKVLKIMPVQKQTRAGQRT 510
K +IIDFFLG SL D+VLKIMPVQKQTRAGQRT
Sbjct: 72 KEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRT 105
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 184 bits (448), Expect = 1e-46
Identities = 96/139 (69%), Positives = 103/139 (74%)
Frame = -3
Query: 672 LFAKEKXXKLXSIXLFSLPIKEFEDH*FLPRPVPE**GSKDHACTETNTCRTAHTFKAFV 493
L + K L I L+SLPIKEFE F + K + FKAFV
Sbjct: 52 LVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFV 111
Query: 492 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSLLPVRRGYWGNKIGKPHTVPCKVTGKC 313
AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIGKPHTVPCKVTGKC
Sbjct: 112 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKC 171
Query: 312 GSVTVRLIPAPRGTGIVSA 256
GSV+VRLIPAPRGTGIVSA
Sbjct: 172 GSVSVRLIPAPRGTGIVSA 190
Score = 80.6 bits (190), Expect = 2e-15
Identities = 36/61 (59%), Positives = 43/61 (70%)
Frame = -2
Query: 253 VPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSE 74
VPKKLL MAG++DCYTSARGSTGTLGNF YLTPDLW+++PL +PY
Sbjct: 192 VPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQA 251
Query: 73 F 71
+
Sbjct: 252 Y 252
Score = 59.3 bits (137), Expect = 5e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -1
Query: 611 KNSKIIDFFLGPSLNDKVLKIMPVQKQTRAGQRT 510
K +IIDFFLG SL D+VLKIMPVQKQTRAGQRT
Sbjct: 72 KEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRT 105
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 184 bits (448), Expect = 1e-46
Identities = 96/139 (69%), Positives = 103/139 (74%)
Frame = -3
Query: 672 LFAKEKXXKLXSIXLFSLPIKEFEDH*FLPRPVPE**GSKDHACTETNTCRTAHTFKAFV 493
L + K L I L+SLPIKEFE F + K + FKAFV
Sbjct: 52 LVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFV 111
Query: 492 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSLLPVRRGYWGNKIGKPHTVPCKVTGKC 313
AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIGKPHTVPCKVTGKC
Sbjct: 112 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKC 171
Query: 312 GSVTVRLIPAPRGTGIVSA 256
GSV+VRLIPAPRGTGIVSA
Sbjct: 172 GSVSVRLIPAPRGTGIVSA 190
Score = 80.6 bits (190), Expect = 2e-15
Identities = 36/61 (59%), Positives = 43/61 (70%)
Frame = -2
Query: 253 VPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSE 74
VPKKLL MAG++DCYTSARGSTGTLGNF YLTPDLW+++PL +PY
Sbjct: 192 VPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQA 251
Query: 73 F 71
+
Sbjct: 252 Y 252
Score = 59.3 bits (137), Expect = 5e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -1
Query: 611 KNSKIIDFFLGPSLNDKVLKIMPVQKQTRAGQRT 510
K +IIDFFLG SL D+VLKIMPVQKQTRAGQRT
Sbjct: 72 KEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRT 105
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 184 bits (448), Expect = 1e-46
Identities = 96/139 (69%), Positives = 103/139 (74%)
Frame = -3
Query: 672 LFAKEKXXKLXSIXLFSLPIKEFEDH*FLPRPVPE**GSKDHACTETNTCRTAHTFKAFV 493
L + K L I L+SLPIKEFE F + K + FKAFV
Sbjct: 52 LVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFV 111
Query: 492 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSLLPVRRGYWGNKIGKPHTVPCKVTGKC 313
AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIGKPHTVPCKVTGKC
Sbjct: 112 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKC 171
Query: 312 GSVTVRLIPAPRGTGIVSA 256
GSV+VRLIPAPRGTGIVSA
Sbjct: 172 GSVSVRLIPAPRGTGIVSA 190
Score = 80.6 bits (190), Expect = 2e-15
Identities = 36/61 (59%), Positives = 43/61 (70%)
Frame = -2
Query: 253 VPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSE 74
VPKKLL MAG++DCYTSARGSTGTLGNF YLTPDLW+++PL +PY
Sbjct: 192 VPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQA 251
Query: 73 F 71
+
Sbjct: 252 Y 252
Score = 59.3 bits (137), Expect = 5e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -1
Query: 611 KNSKIIDFFLGPSLNDKVLKIMPVQKQTRAGQRT 510
K +IIDFFLG SL D+VLKIMPVQKQTRAGQRT
Sbjct: 72 KEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRT 105
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 184 bits (448), Expect = 1e-46
Identities = 96/139 (69%), Positives = 103/139 (74%)
Frame = -3
Query: 672 LFAKEKXXKLXSIXLFSLPIKEFEDH*FLPRPVPE**GSKDHACTETNTCRTAHTFKAFV 493
L + K L I L+SLPIKEFE F + K + FKAFV
Sbjct: 52 LVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFV 111
Query: 492 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSLLPVRRGYWGNKIGKPHTVPCKVTGKC 313
AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIGKPHTVPCKVTGKC
Sbjct: 112 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKC 171
Query: 312 GSVTVRLIPAPRGTGIVSA 256
GSV+VRLIPAPRGTGIVSA
Sbjct: 172 GSVSVRLIPAPRGTGIVSA 190
Score = 80.6 bits (190), Expect = 2e-15
Identities = 36/61 (59%), Positives = 43/61 (70%)
Frame = -2
Query: 253 VPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSE 74
VPKKLL MAG++DCYTSARGSTGTLGNF YLTPDLW+++PL +PY
Sbjct: 192 VPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQA 251
Query: 73 F 71
+
Sbjct: 252 Y 252
Score = 59.3 bits (137), Expect = 5e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -1
Query: 611 KNSKIIDFFLGPSLNDKVLKIMPVQKQTRAGQRT 510
K +IIDFFLG SL D+VLKIMPVQKQTRAGQRT
Sbjct: 72 KEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRT 105
>AY118799-1|AAM50659.1| 171|Drosophila melanogaster GH19411p
protein.
Length = 171
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 345 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLRSFFRWLVY 220
H +PCKV+ + + L A G +V Q L F+ WL +
Sbjct: 20 HLLPCKVSASIVNGLISLAVAAVGGYLVHPQNLAQFWSWLQF 61
>AY089579-1|AAL90317.1| 911|Drosophila melanogaster RE11181p
protein.
Length = 911
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 345 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLRSFFRWLVY 220
H +PCKV+ + + L A G +V Q L F+ WL +
Sbjct: 760 HLLPCKVSASIVNGLISLAVAAVGGYLVHPQNLAQFWSWLQF 801
>AE014297-3664|AAF56360.2| 911|Drosophila melanogaster CG31121-PB,
isoform B protein.
Length = 911
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 345 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLRSFFRWLVY 220
H +PCKV+ + + L A G +V Q L F+ WL +
Sbjct: 760 HLLPCKVSASIVNGLISLAVAAVGGYLVHPQNLAQFWSWLQF 801
>AE014297-3663|AAF56359.2| 911|Drosophila melanogaster CG31121-PA,
isoform A protein.
Length = 911
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 345 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAQFLRSFFRWLVY 220
H +PCKV+ + + L A G +V Q L F+ WL +
Sbjct: 760 HLLPCKVSASIVNGLISLAVAAVGGYLVHPQNLAQFWSWLQF 801
>BT028842-1|ABI34223.2| 274|Drosophila melanogaster RT01105p
protein.
Length = 274
Score = 28.7 bits (61), Expect = 8.0
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 284 PLVVLELCLRSS*EASSDGWCTG-LLHLSSWFNW 186
PL +E CLR +A W T L SW NW
Sbjct: 210 PLTYVEKCLRGEIKADRANWNTSDLTARLSWINW 243
>AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2
protein.
Length = 1711
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 443 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTP 339
RKSP + L+L+SC+ Q ++ T SE+ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEP 1070
>AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon protein.
Length = 1695
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 443 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTP 339
RKSP + L+L+SC+ Q ++ T SE+ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEP 1070
>AE014297-2157|AAF55280.1| 279|Drosophila melanogaster CG5952-PA
protein.
Length = 279
Score = 28.7 bits (61), Expect = 8.0
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 284 PLVVLELCLRSS*EASSDGWCTG-LLHLSSWFNW 186
PL +E CLR +A W T L SW NW
Sbjct: 215 PLTYVEKCLRGEIKADRANWNTSDLTARLSWINW 248
>AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB,
isoform B protein.
Length = 1695
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 443 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTP 339
RKSP + L+L+SC+ Q ++ T SE+ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEP 1070
>AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA,
isoform A protein.
Length = 1711
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 443 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTP 339
RKSP + L+L+SC+ Q ++ T SE+ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEP 1070
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,074,437
Number of Sequences: 53049
Number of extensions: 737838
Number of successful extensions: 1707
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1707
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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