Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0747.Seq
         (648 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-301|AAF47523.1|  197|Drosophila melanogaster CG13926-PA...    52   9e-07
BT003188-1|AAO24943.1|  723|Drosophila melanogaster RE63690p pro...    30   2.4  
AE014296-3596|AAN12186.2| 1326|Drosophila melanogaster CG33291-P...    30   2.4  
AY070931-1|AAL48553.1|  611|Drosophila melanogaster RE03173p pro...    29   7.2  
AL021726-3|CAA16810.1|  611|Drosophila melanogaster EG:171E4.2 p...    29   7.2  
AJ626646-1|CAF25166.1|  611|Drosophila melanogaster singed wings...    29   7.2  
AE014298-242|AAF45654.3|  611|Drosophila melanogaster CG3095-PA ...    29   7.2  

>AE014296-301|AAF47523.1|  197|Drosophila melanogaster CG13926-PA
           protein.
          Length = 197

 Score = 51.6 bits (118), Expect = 9e-07
 Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
 Frame = -1

Query: 552 KNLHELPNENKFHGQ-FGQQQICHNAQIGISIEPEANVQLLASSVALQETNNYVTFAQKM 376
           K  HEL  E + HG  FG Q+I H AQIG+S+EPE  V     + A+   N+   F Q+M
Sbjct: 90  KKSHEL--EAQAHGMVFGSQEISHIAQIGVSLEPELTV--AQQTPAVSTANDNKQFGQRM 145

Query: 375 LENLVNF 355
           LEN  N+
Sbjct: 146 LENFFNY 152



 Score = 32.7 bits (71), Expect = 0.44
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = -3

Query: 409 NKQLCDICSENVRKLSQFCTSFSVTQDQMTPTPGVSYIPLNTLHTWYQNFER 254
           NKQ      EN      + +SF V    + P    +++P + +  WY NF+R
Sbjct: 138 NKQFGQRMLEN---FFNYASSFGVAARDIPPISSETFVPFSVVQNWYTNFQR 186


>BT003188-1|AAO24943.1|  723|Drosophila melanogaster RE63690p
           protein.
          Length = 723

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 459 Q*IFLFVHCDISAAVQIAHGICFHLVAHVSFFKFGNLKIWADGLMXEM 602
           Q +  F++C   +++ +AHG    L+A  SFF+   L  + +    EM
Sbjct: 582 QLVMQFLYCGGCSSLDVAHGDVLELMAAASFFQLEGLLRYTEARCSEM 629


>AE014296-3596|AAN12186.2| 1326|Drosophila melanogaster CG33291-PA
            protein.
          Length = 1326

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 459  Q*IFLFVHCDISAAVQIAHGICFHLVAHVSFFKFGNLKIWADGLMXEM 602
            Q +  F++C   +++ +AHG    L+A  SFF+   L  + +    EM
Sbjct: 1185 QLVMQFLYCGGCSSLDVAHGDVLELMAAASFFQLEGLLRYTEARCSEM 1232


>AY070931-1|AAL48553.1|  611|Drosophila melanogaster RE03173p
           protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = -3

Query: 415 SRNKQLCDICSENVRKLSQFCTSFSVTQDQMTPTPGVSYIPLNTLHTWYQNFERGS 248
           ++NK +    S N+R L         T+      P  SY   N  HTW+Q+ ++ S
Sbjct: 301 NQNKNITLDISGNMRMLCTPLNEIIYTESINFLNPKHSYCQYNATHTWFQSTDKVS 356


>AL021726-3|CAA16810.1|  611|Drosophila melanogaster EG:171E4.2
           protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = -3

Query: 415 SRNKQLCDICSENVRKLSQFCTSFSVTQDQMTPTPGVSYIPLNTLHTWYQNFERGS 248
           ++NK +    S N+R L         T+      P  SY   N  HTW+Q+ ++ S
Sbjct: 301 NQNKNITLDISGNMRMLCTPLNEIIYTESINFLNPKHSYCQYNATHTWFQSTDKVS 356


>AJ626646-1|CAF25166.1|  611|Drosophila melanogaster singed wings
           protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = -3

Query: 415 SRNKQLCDICSENVRKLSQFCTSFSVTQDQMTPTPGVSYIPLNTLHTWYQNFERGS 248
           ++NK +    S N+R L         T+      P  SY   N  HTW+Q+ ++ S
Sbjct: 301 NQNKNITLDISGNMRMLCTPLNEIIYTESINFLNPKHSYCQYNATHTWFQSTDKVS 356


>AE014298-242|AAF45654.3|  611|Drosophila melanogaster CG3095-PA
           protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = -3

Query: 415 SRNKQLCDICSENVRKLSQFCTSFSVTQDQMTPTPGVSYIPLNTLHTWYQNFERGS 248
           ++NK +    S N+R L         T+      P  SY   N  HTW+Q+ ++ S
Sbjct: 301 NQNKNITLDISGNMRMLCTPLNEIIYTESINFLNPKHSYCQYNATHTWFQSTDKVS 356


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,825,435
Number of Sequences: 53049
Number of extensions: 533064
Number of successful extensions: 1416
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1415
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)