Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0745.Seq
         (628 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   6.0  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       23   7.9  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   7.9  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   7.9  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 499 HQGSGEKVSEGDNTIHYHHP 558
           HQ S   +  G   +H+HHP
Sbjct: 334 HQMSAMSMGMGSMGLHHHHP 353


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = -1

Query: 259 ILPR---SVLCGIIPLTVFHRILDGA 191
           +LPR   +V+C I+P T+   + DGA
Sbjct: 118 VLPRQDNTVICPILPQTLLATLHDGA 143


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 511 GEKVSEGDNTIHYHHPI 561
           GE   EGD T H  HP+
Sbjct: 91  GEVGGEGDGTQHESHPL 107


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -1

Query: 448 PLVFKLTNNITVFPSNFMGQSAYMTVITARFQTE 347
           PLV K +NN TV  +       Y+  +T  F  E
Sbjct: 279 PLVVKKSNNHTVLITQARSFGKYVGRLTVNFDCE 312


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,720
Number of Sequences: 2352
Number of extensions: 14216
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)