Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0745.Seq
(628 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 149 1e-35
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 149 1e-35
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 149 1e-35
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 149 1e-35
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 149 1e-35
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 149 1e-35
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 149 1e-35
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 149 1e-35
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 149 1e-35
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 149 1e-35
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 149 1e-35
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 141 2e-33
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 88 2e-17
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 87 6e-17
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 60 6e-09
BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein. 31 3.3
AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein. 31 4.4
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 149 bits (360), Expect = 1e-35
Identities = 65/88 (73%), Positives = 78/88 (88%)
Frame = +3
Query: 3 RGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPF 182
RGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+
Sbjct: 12 RGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPY 71
Query: 183 HFRAPSKILWKTVRGMIPHKTERGRMLL 266
HFRAPS+I W+TVRGM+PHKT+RG+ L
Sbjct: 72 HFRAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 86.6 bits (205), Expect = 6e-17
Identities = 40/112 (35%), Positives = 62/112 (55%)
Frame = +2
Query: 233 PTQNRAWQNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 412
P + + Q AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 413 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDLVRRCPKATTPFTTIIQSYG 568
Y+ V LE+KRK KA +K+L R+ K + K +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 149 bits (360), Expect = 1e-35
Identities = 65/88 (73%), Positives = 78/88 (88%)
Frame = +3
Query: 3 RGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPF 182
RGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+
Sbjct: 12 RGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPY 71
Query: 183 HFRAPSKILWKTVRGMIPHKTERGRMLL 266
HFRAPS+I W+TVRGM+PHKT+RG+ L
Sbjct: 72 HFRAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 86.6 bits (205), Expect = 6e-17
Identities = 40/112 (35%), Positives = 62/112 (55%)
Frame = +2
Query: 233 PTQNRAWQNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 412
P + + Q AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 413 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDLVRRCPKATTPFTTIIQSYG 568
Y+ V LE+KRK KA +K+L R+ K + K +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 149 bits (360), Expect = 1e-35
Identities = 65/88 (73%), Positives = 78/88 (88%)
Frame = +3
Query: 3 RGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPF 182
RGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+
Sbjct: 12 RGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPY 71
Query: 183 HFRAPSKILWKTVRGMIPHKTERGRMLL 266
HFRAPS+I W+TVRGM+PHKT+RG+ L
Sbjct: 72 HFRAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 86.6 bits (205), Expect = 6e-17
Identities = 40/112 (35%), Positives = 62/112 (55%)
Frame = +2
Query: 233 PTQNRAWQNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 412
P + + Q AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 413 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDLVRRCPKATTPFTTIIQSYG 568
Y+ V LE+KRK KA +K+L R+ K + K +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 149 bits (360), Expect = 1e-35
Identities = 65/88 (73%), Positives = 78/88 (88%)
Frame = +3
Query: 3 RGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPF 182
RGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+
Sbjct: 12 RGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPY 71
Query: 183 HFRAPSKILWKTVRGMIPHKTERGRMLL 266
HFRAPS+I W+TVRGM+PHKT+RG+ L
Sbjct: 72 HFRAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 86.6 bits (205), Expect = 6e-17
Identities = 40/112 (35%), Positives = 62/112 (55%)
Frame = +2
Query: 233 PTQNRAWQNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 412
P + + Q AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 413 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDLVRRCPKATTPFTTIIQSYG 568
Y+ V LE+KRK KA +K+L R+ K + K +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 149 bits (360), Expect = 1e-35
Identities = 65/88 (73%), Positives = 78/88 (88%)
Frame = +3
Query: 3 RGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPF 182
RGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+
Sbjct: 12 RGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPY 71
Query: 183 HFRAPSKILWKTVRGMIPHKTERGRMLL 266
HFRAPS+I W+TVRGM+PHKT+RG+ L
Sbjct: 72 HFRAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 86.6 bits (205), Expect = 6e-17
Identities = 40/112 (35%), Positives = 62/112 (55%)
Frame = +2
Query: 233 PTQNRAWQNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 412
P + + Q AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 413 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDLVRRCPKATTPFTTIIQSYG 568
Y+ V LE+KRK KA +K+L R+ K + K +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 149 bits (360), Expect = 1e-35
Identities = 65/88 (73%), Positives = 78/88 (88%)
Frame = +3
Query: 3 RGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPF 182
RGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+
Sbjct: 10 RGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPY 69
Query: 183 HFRAPSKILWKTVRGMIPHKTERGRMLL 266
HFRAPS+I W+TVRGM+PHKT+RG+ L
Sbjct: 70 HFRAPSRIFWRTVRGMLPHKTKRGQAAL 97
Score = 86.6 bits (205), Expect = 6e-17
Identities = 40/112 (35%), Positives = 62/112 (55%)
Frame = +2
Query: 233 PTQNRAWQNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 412
P + + Q AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 87 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 146
Query: 413 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDLVRRCPKATTPFTTIIQSYG 568
Y+ V LE+KRK KA +K+L R+ K + K +T +++++G
Sbjct: 147 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 198
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 149 bits (360), Expect = 1e-35
Identities = 65/88 (73%), Positives = 78/88 (88%)
Frame = +3
Query: 3 RGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPF 182
RGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+
Sbjct: 12 RGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPY 71
Query: 183 HFRAPSKILWKTVRGMIPHKTERGRMLL 266
HFRAPS+I W+TVRGM+PHKT+RG+ L
Sbjct: 72 HFRAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 86.6 bits (205), Expect = 6e-17
Identities = 40/112 (35%), Positives = 62/112 (55%)
Frame = +2
Query: 233 PTQNRAWQNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 412
P + + Q AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 413 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDLVRRCPKATTPFTTIIQSYG 568
Y+ V LE+KRK KA +K+L R+ K + K +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 149 bits (360), Expect = 1e-35
Identities = 65/88 (73%), Positives = 78/88 (88%)
Frame = +3
Query: 3 RGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPF 182
RGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+
Sbjct: 12 RGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPY 71
Query: 183 HFRAPSKILWKTVRGMIPHKTERGRMLL 266
HFRAPS+I W+TVRGM+PHKT+RG+ L
Sbjct: 72 HFRAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 86.6 bits (205), Expect = 6e-17
Identities = 40/112 (35%), Positives = 62/112 (55%)
Frame = +2
Query: 233 PTQNRAWQNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 412
P + + Q AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 413 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDLVRRCPKATTPFTTIIQSYG 568
Y+ V LE+KRK KA +K+L R+ K + K +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 149 bits (360), Expect = 1e-35
Identities = 65/88 (73%), Positives = 78/88 (88%)
Frame = +3
Query: 3 RGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPF 182
RGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+
Sbjct: 12 RGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPY 71
Query: 183 HFRAPSKILWKTVRGMIPHKTERGRMLL 266
HFRAPS+I W+TVRGM+PHKT+RG+ L
Sbjct: 72 HFRAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 86.6 bits (205), Expect = 6e-17
Identities = 40/112 (35%), Positives = 62/112 (55%)
Frame = +2
Query: 233 PTQNRAWQNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 412
P + + Q AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 413 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDLVRRCPKATTPFTTIIQSYG 568
Y+ V LE+KRK KA +K+L R+ K + K +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 149 bits (360), Expect = 1e-35
Identities = 65/88 (73%), Positives = 78/88 (88%)
Frame = +3
Query: 3 RGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPF 182
RGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+
Sbjct: 12 RGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPY 71
Query: 183 HFRAPSKILWKTVRGMIPHKTERGRMLL 266
HFRAPS+I W+TVRGM+PHKT+RG+ L
Sbjct: 72 HFRAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 84.6 bits (200), Expect = 3e-16
Identities = 39/112 (34%), Positives = 61/112 (54%)
Frame = +2
Query: 233 PTQNRAWQNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 412
P + + Q AL L+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDHLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 413 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDLVRRCPKATTPFTTIIQSYG 568
Y+ V LE+KRK KA +K+L R+ K + K +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 149 bits (360), Expect = 1e-35
Identities = 65/88 (73%), Positives = 78/88 (88%)
Frame = +3
Query: 3 RGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPF 182
RGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+
Sbjct: 12 RGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPY 71
Query: 183 HFRAPSKILWKTVRGMIPHKTERGRMLL 266
HFRAPS+I W+TVRGM+PHKT+RG+ L
Sbjct: 72 HFRAPSRIFWRTVRGMLPHKTKRGQAAL 99
Score = 86.6 bits (205), Expect = 6e-17
Identities = 40/112 (35%), Positives = 62/112 (55%)
Frame = +2
Query: 233 PTQNRAWQNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 412
P + + Q AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 413 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDLVRRCPKATTPFTTIIQSYG 568
Y+ V LE+KRK KA +K+L R+ K + K +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 141 bits (341), Expect = 2e-33
Identities = 61/88 (69%), Positives = 76/88 (86%)
Frame = +3
Query: 3 RGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPF 182
RGHLLGRLAA++AK +L G KVVVV CE INISGNF+RNKL ++FLRKR N +P+RGP+
Sbjct: 12 RGHLLGRLAAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNTSPSRGPY 71
Query: 183 HFRAPSKILWKTVRGMIPHKTERGRMLL 266
HFRAPS++ W+TVRGM+PHKT+RG+ L
Sbjct: 72 HFRAPSRVFWRTVRGMLPHKTKRGQAAL 99
Score = 84.6 bits (200), Expect = 3e-16
Identities = 40/112 (35%), Positives = 61/112 (54%)
Frame = +2
Query: 233 PTQNRAWQNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 412
P + + Q AL RL+ DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 89 PHKTKRGQAALDRLKVSDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 148
Query: 413 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDLVRRCPKATTPFTTIIQSYG 568
Y+ V LE+KRK KA +K+L R+ K + K +T +++++G
Sbjct: 149 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 200
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 88.2 bits (209), Expect = 2e-17
Identities = 41/112 (36%), Positives = 62/112 (55%)
Frame = +2
Query: 233 PTQNRAWQNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 412
P + + Q AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 28 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 87
Query: 413 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDLVRRCPKATTPFTTIIQSYG 568
Y+ V LEDKRK KA +K+L R+ K + K +T +++++G
Sbjct: 88 YQAVTATLEDKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 139
Score = 68.9 bits (161), Expect = 1e-11
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = +3
Query: 156 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGRMLL 266
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ L
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAAL 38
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 86.6 bits (205), Expect = 6e-17
Identities = 40/112 (35%), Positives = 62/112 (55%)
Frame = +2
Query: 233 PTQNRAWQNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 412
P + + Q AL RL+ +DG PPP+D LKP R + ++GRL+HE+GWK
Sbjct: 28 PHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWK 87
Query: 413 YRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDLVRRCPKATTPFTTIIQSYG 568
Y+ V LE+KRK KA +K+L R+ K + K +T +++++G
Sbjct: 88 YQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHG 139
Score = 68.9 bits (161), Expect = 1e-11
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = +3
Query: 156 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGRMLL 266
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ L
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAAL 38
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 60.1 bits (139), Expect = 6e-09
Identities = 30/86 (34%), Positives = 43/86 (50%)
Frame = +2
Query: 272 LRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRK 451
L+ +DG PPP+D LKP R + +GR + E+ WKY+ V LE+KRK
Sbjct: 16 LKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVRWKYQAVTATLEEKRK 75
Query: 452 GKAVKRVAYEKKLKRITKDLVRRCPK 529
KA +K+L R+ K + K
Sbjct: 76 EKAKIHYWKKKQLMRLRKQAEKNVKK 101
>BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein.
Length = 551
Score = 31.1 bits (67), Expect = 3.3
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 368 NYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLK 493
NY R S E+ K RDV+ LEDK K ++ V ++K K
Sbjct: 500 NYDFQARNSSELSVKQRDVLEVLEDKEKVSELEAVMEKQKKK 541
>AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein.
Length = 769
Score = 30.7 bits (66), Expect = 4.4
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 19 AVWRQSSPRSFSKGTKLLWFAANKSISLATSLGTNSSLCHSCVRGAT*ILLVDLSIL 189
+ WRQS PR + +G + L A ++ +L + T+ + C RG L LS+L
Sbjct: 30 SAWRQSRPREYYEGGRGL-HAPDRETALGLGIATSERMLGIC-RGRRKFLAASLSLL 84
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,820,123
Number of Sequences: 237096
Number of extensions: 2211196
Number of successful extensions: 12113
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12098
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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