Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0743.Seq
         (748 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    28   0.35 
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    28   0.35 
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    25   1.9  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    25   1.9  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           25   3.3  
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    23   7.6  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    23   7.6  

>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 18/69 (26%), Positives = 30/69 (43%)
 Frame = +3

Query: 528 LQMTRRRFWRLTLSWKKLLHLCWNPSVDVTLSIMATGTISFKCXSSGRGGFFWGALHSXV 707
           ++  R+R  RLT++   +   CW P V +TL  M     + K   + + G F  A+ +  
Sbjct: 298 IERARQRTLRLTITIVVVFVWCWTPYVVMTLWYMFDRESAAKVDVAVQDGLFLMAVSNSC 357

Query: 708 TGTWPXGQY 734
                 G Y
Sbjct: 358 MNPLVYGSY 366


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 591 CWNPSVDVTLSIMATGTIS 647
           CWNP+ DVT + + TG I+
Sbjct: 313 CWNPAFDVTPAELITGIIT 331


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 468 SHPQPIRRAPTVPAAPIPPQ-ARPGQAQP 385
           +HP P+R  P+VP  P+P Q A P   QP
Sbjct: 424 THP-PVRPTPSVP-RPLPSQEASPSGEQP 450


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 626 DGKRNIHRRVPAQVXELLPAQRQPPKATPR 537
           D   NI++   A + ++ P++R P + +PR
Sbjct: 234 DDIENIYKNAHASIRKIPPSRRNPRRRSPR 263


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -3

Query: 656 ALEGYSSSSHDGKRNIHRRVPAQVXELLPAQRQPPKATPRH 534
           A  G +SS H G  +++ RVP +     P    P  A   +
Sbjct: 43  ASTGSASSGHSGSSSLYDRVPREHATSSPYHAPPSPANSHY 83


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = -2

Query: 519 WWWKEGNQDPVTKALPYSHPQPIRRAPTVPAAPIPPQARPGQ 394
           W+WK+G  D       YS    + R+    + P   Q + G+
Sbjct: 200 WYWKDGQMDVYYFVCNYSFTNIMDRS-VYQSGPTASQCKTGR 240


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 710 SNX*MQSTPEESTTSAGXALEGYSSSS 630
           +N  + STP  STTS+       SSSS
Sbjct: 534 NNTTVVSTPSSSTTSSSSTTSSSSSSS 560


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,998
Number of Sequences: 2352
Number of extensions: 14936
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)