Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0741.Seq
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23520| Best HMM Match : TIL (HMM E-Value=0.0062) 41 8e-04
SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38) 36 0.024
SB_38887| Best HMM Match : EGF_CA (HMM E-Value=6.2e-31) 36 0.024
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 34 0.096
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_23038| Best HMM Match : EGF_2 (HMM E-Value=2.8e-11) 32 0.39
SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0) 32 0.51
SB_26085| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0) 32 0.51
SB_29838| Best HMM Match : EGF (HMM E-Value=1.2e-15) 31 1.2
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_50280| Best HMM Match : Marek_A (HMM E-Value=1.7) 29 2.7
SB_21594| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_24394| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_41658| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 29 4.8
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_58621| Best HMM Match : RVT_1 (HMM E-Value=1.5e-25) 28 6.3
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_42336| Best HMM Match : Sushi (HMM E-Value=1.5e-08) 28 8.4
SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 28 8.4
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 28 8.4
>SB_23520| Best HMM Match : TIL (HMM E-Value=0.0062)
Length = 238
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/55 (41%), Positives = 30/55 (54%)
Frame = +1
Query: 91 CPENSHLTMDPCAPTCEDPDLTHTSCVAALLPTCHCDDGFLFDKSGKCVPVDECP 255
CP ++ L M TC D+ TS A L C CDDG +F +G C+ V+ECP
Sbjct: 3 CPGDTKLRMCKLQATCNKRDICDTS--RAKLRCC-CDDGLVF-YNGLCIRVEECP 53
>SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38)
Length = 641
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +1
Query: 118 DPCAPTCEDPDLTHTSCVAALLP-TCHCDDGFLFD-KSGKCVPVDECPTKRVTVTTDSD 288
D C + PD C + TC CD G +D K KC+ VDEC T +T ++
Sbjct: 312 DECTNSTICPDSDRMLCTNTVGSYTCSCDTGLAWDEKKRKCIDVDECMTGTHNCSTTAE 370
>SB_38887| Best HMM Match : EGF_CA (HMM E-Value=6.2e-31)
Length = 131
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +1
Query: 118 DPCAPTCEDPDLTHTSCVAALLP-TCHCDDGFLFD-KSGKCVPVDECPTKRVTVTTDSD 288
D C + PD C + TC CD G +D K KC+ VDEC T +T ++
Sbjct: 3 DECTNSTICPDSDRMLCTNTVGSYTCSCDTGLAWDEKKRKCIDVDECMTGTHNCSTTAE 61
>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
Length = 705
Score = 34.3 bits (75), Expect = 0.096
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Frame = +1
Query: 91 CPENS--HLTMDPCAPTCEDPDLTHTSCVAALLPTCHCDDGFL--FDKSGK--CVPVDEC 252
CPEN+ C TC DP + +C + C C + F+ + GK C+ EC
Sbjct: 180 CPENAVFKYCTSACPETCHDPPGRNKTCSMRCVEGCECKEEFVQRVNAVGKVQCIKRKEC 239
Query: 253 P 255
P
Sbjct: 240 P 240
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 187 TCHCDDGFLFDKSGKCVPVDECPT 258
TC C +G+ D GKC V+EC T
Sbjct: 483 TCQCAEGYERDSQGKCADVNECKT 506
>SB_23038| Best HMM Match : EGF_2 (HMM E-Value=2.8e-11)
Length = 1477
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +1
Query: 100 NSHLTMDPCAPTCEDPDLTHTSCVAALLPTCHCDDGFLFDKSGKCVPVDEC 252
N+ +T+ C TCE+ H CVA TC CD F SG D C
Sbjct: 1336 NATITITTCTYTCENNCSNHGQCVAR--DTCVCDQKF----SGNDCSADTC 1380
>SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 3312
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +1
Query: 187 TCHCDDGFLFDKSGK-CVPVDECPT 258
TC C +GFL + GK C +DEC T
Sbjct: 561 TCACREGFLLRQDGKTCEDIDECDT 585
>SB_26085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 484
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 115 MDPCAPTCEDPDLTHTSCVAALLP-TCHCDDGFLFDK-SGKCVPVDEC 252
MD C P+ H+ C + TC C+ G+L D C+ VDEC
Sbjct: 285 MDECLVPGSCPE--HSVCTNHVKGFTCECESGYLMDDLKAHCIDVDEC 330
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = +1
Query: 163 SCVAALLP-TCHCDDGFLFDK----SGKCVPVDEC 252
+C+ AL C C+ GF D+ SG CV +DEC
Sbjct: 254 TCLNALGSYACQCEPGFRLDRTLGLSGVCVDMDEC 288
>SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 165
Score = 31.9 bits (69), Expect = 0.51
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 187 TCHCDDGFLFDKSGKCVPVDECPT 258
TC C +G+ + GKC V+EC T
Sbjct: 26 TCQCAEGYERNSQGKCADVNECKT 49
>SB_29838| Best HMM Match : EGF (HMM E-Value=1.2e-15)
Length = 373
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +1
Query: 133 TCEDPDLTHTSCVAALLPTCHCDDGFLFDKSGKCVPVDEC 252
TC + C L P CHC GF D KC +DEC
Sbjct: 235 TCSNGGTCEVDC-KTLRPRCHCLAGFSGD---KCENIDEC 270
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +1
Query: 190 CHCDDGFLFDKSGK-CVPVDECPT 258
C C +G + GK CV VDEC T
Sbjct: 378 CTCPEGLALSEDGKSCVDVDECST 401
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 190 CHCDDGFLFDKSGKCVPVDECPTKRVTVTTDS 285
C C +G+ G+CV ++EC T D+
Sbjct: 295 CTCFEGYHLTSDGQCVDINECSCSNQTSEDDT 326
>SB_50280| Best HMM Match : Marek_A (HMM E-Value=1.7)
Length = 573
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Frame = -2
Query: 115 LSNENSQDNLFQPNPGWLREPSGIRA----GAWGS 23
L NEN++D+L +P+P P+GI + G WG+
Sbjct: 179 LENENAEDDLDKPSPTPYNYPAGIGSVIMNGCWGT 213
>SB_21594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 133 TCEDPDLTHTSCVAALLPTCHCDDGFLFDK 222
TC + C L+P CHC +GF DK
Sbjct: 475 TCSNGGTCEVDC-KTLVPRCHCPEGFSGDK 503
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +1
Query: 187 TCHCDDGFLFDKSG-KCVPVDEC 252
TC C G+ FD S +C+ ++EC
Sbjct: 2128 TCDCPRGYTFDNSSRRCIDINEC 2150
>SB_24394| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 29.5 bits (63), Expect = 2.7
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -2
Query: 427 NPCYYYFIIFIALLGRRAYGPPDG 356
+P Y + ++F+ +GR+ +G PDG
Sbjct: 3 SPLYLFSLLFVVHVGRQVHGAPDG 26
>SB_41658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 448
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Frame = -3
Query: 342 RPWTSAMPGAEPSRCLL*VGISCYSHSLGRTFINGYAFSR---FVEQEAIITVACWEQCR 172
RP + +P P R L +SC + LG + N S + E +T C CR
Sbjct: 261 RPPQTLLPQVTPERLALSQRLSCRTMILGHSTQNKNRLSAHAFLIAPEPCVTRQCDHDCR 320
Query: 171 YAAGVC 154
Y C
Sbjct: 321 YCGHDC 326
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +1
Query: 115 MDPCAPTCEDPDLTHTSCVAALLPTCHCDDGFLFDKSGKCVPVDEC 252
+D CA D H +C C G+ +CV VDEC
Sbjct: 561 IDECARNHGKGDCEHLCTNTVGSFSCSCHQGYRLKGKHQCVDVDEC 606
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 79 VEKDCPENSHLTMDPCAPTCEDPDL 153
++ DCP N D C C +PDL
Sbjct: 1577 LDSDCPGNQKCCSDGCTMICTNPDL 1601
>SB_58621| Best HMM Match : RVT_1 (HMM E-Value=1.5e-25)
Length = 1238
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 364 PDGKWLPSPMDFSNARSRAKPLPIISRNQLL 272
P G+ LPSP + N+R LP SR+ LL
Sbjct: 1058 PLGQTLPSPAELLNSRIYQSNLPATSRHALL 1088
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -2
Query: 562 TRCVH*QSPLQTNYHLKKLHSKISNHEDSLS-IRSTYYNKTA 440
T C H +S KKLH +I +++ LS +++TY K A
Sbjct: 86 TECHHWKSMSSNQDSQKKLHREIDQYQNELSALQNTYSQKIA 127
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 109 LTMDPCAPTCEDPDLTHTSCVAALLPTCHCDDGFLFDKSGKCVPVDECPTK 261
L C TCE+ + + C+C DG + +G CV +C K
Sbjct: 1226 LVYSDCGITCENLHPINGG-ERPCVSGCYCPDGLIMHDNGTCVQSMQCQCK 1275
>SB_42336| Best HMM Match : Sushi (HMM E-Value=1.5e-08)
Length = 303
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 190 CHCDDGFLFDKSGKCVPVDECPTK 261
C+C GF CV +DEC K
Sbjct: 30 CYCKRGFKLSGQYHCVDIDECAEK 53
>SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 890
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +1
Query: 478 NLHGLRFLSEVFSNGNSFGEGTANERTV*FWFKRFRDGNFDLKNEDWKTGHTC*I----T 645
+LH R + + S+G+++ +G N + F+ + D N+D + +T HT +
Sbjct: 599 SLHHYRNSTTITSSGSTWIKG--NHGNLGFYLVNYEDDNWDALADQLRTNHTIRVLVLQV 656
Query: 646 LELEEMVGNLFRA 684
L + + G LF A
Sbjct: 657 LGVADRAGLLFNA 669
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = -2
Query: 538 PLQTNYHLKKLHSKISNHEDSLSIRSTYYNKTAISYYNPCYYYFIIFIA 392
PL N K H + + D+ S S Y ++Y PC I+F A
Sbjct: 913 PLPNNAQNKAKHLQFVSGVDAFSYWSATYTWDFLNYLVPCLLILILFAA 961
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,290,685
Number of Sequences: 59808
Number of extensions: 553203
Number of successful extensions: 1363
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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