Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0740.Seq
         (527 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      26   0.90 
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     23   8.4  

>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 25.8 bits (54), Expect = 0.90
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 257 LPSAFGFLFRYNVLFINFSFYRLRFRIFNYFCFASS 150
           L  AFG +F +N + +     RLR+  F   CF  +
Sbjct: 359 LSCAFGAVFIFNYIPLQEGTTRLRYTFFYAVCFVET 394


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 129 DNDAPKKGRGKAKVVEDPETESVEAEVDEKNIVSEKKT 242
           D+++ ++  G  K+ ++P TESVE E        E KT
Sbjct: 565 DDESKEQTYGDPKIEDNP-TESVEIEWSLDETKREAKT 601


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 402,843
Number of Sequences: 2352
Number of extensions: 6197
Number of successful extensions: 31
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)