Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0740.Seq
         (527 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82274-14|CAJ76933.1|   50|Caenorhabditis elegans Hypothetical p...    61   4e-10
Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical pr...    61   4e-10
AL033508-3|CAA22054.1|  315|Caenorhabditis elegans Hypothetical ...    30   1.2  
Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p...    27   6.3  
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ...    27   8.3  

>Z82274-14|CAJ76933.1|   50|Caenorhabditis elegans Hypothetical
           protein JC8.3c protein.
          Length = 50

 Score = 61.3 bits (142), Expect = 4e-10
 Identities = 26/42 (61%), Positives = 35/42 (83%)
 Frame = -1

Query: 509 MARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALXI 384
           MA+ L G+VKEILGTAQSVGCT++G+ PHD+I+ I +G + I
Sbjct: 6   MAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEI 47


>Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical
           protein JC8.3a protein.
          Length = 165

 Score = 61.3 bits (142), Expect = 4e-10
 Identities = 26/42 (61%), Positives = 35/42 (83%)
 Frame = -1

Query: 509 MARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALXI 384
           MA+ L G+VKEILGTAQSVGCT++G+ PHD+I+ I +G + I
Sbjct: 121 MAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEI 162


>AL033508-3|CAA22054.1|  315|Caenorhabditis elegans Hypothetical
           protein Y106G6G.4 protein.
          Length = 315

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 355 KKKSGXEXXXXXXFWCCFLYFTILILSICVTG 260
           KKK   +       WCCF   TI +  IC+ G
Sbjct: 102 KKKYKRKNSKFGTCWCCFAAVTIFLAVICILG 133


>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
           protein T05F1.6 protein.
          Length = 1165

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 132 NDAPKKGRGKAKVVEDPETESV-EAEVDEKNIVSEKKTKR 248
           ND  K    + KVV D + E + + + D+++   +KKTK+
Sbjct: 148 NDTEKPEENEEKVVGDEDEEDIDDVQEDDEDEAPKKKTKK 187


>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
           protein Y53F4B.9 protein.
          Length = 1168

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 138 APKKGRGKAKVVEDPETESVEAEVDEKNIVSEKKTKRGRK 257
           AP+  + K  V  D E +SVE    E  + SEKK ++ R+
Sbjct: 376 APRSAK-KPVVSLDGEADSVEVNCVEMAVESEKKQRKNRR 414


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,033,218
Number of Sequences: 27780
Number of extensions: 146147
Number of successful extensions: 598
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)