Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0739.Seq
         (518 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   6.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   6.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   8.7  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 445 NYELFNRNSGREFDIKLIDTVASR 516
           +YE+ NR +    D+K + TV  +
Sbjct: 239 HYEVINRQTLDTADVKTLTTVVEK 262


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 445 NYELFNRNSGREFDIKLIDTVASR 516
           +YE+ NR +    D+K + TV  +
Sbjct: 165 HYEVINRQTLDTADVKTLTTVVEK 188


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 264 SKRVKMLLEYFVHGIIEYDLGSILLVFRT 178
           SK +++  E F HG++     S LLV +T
Sbjct: 862 SKLIRLFNEIFGHGLLLMFGISFLLVTQT 890


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 269 SAQSG*KCCLNIS 231
           S+Q G K CLN+S
Sbjct: 32  SSQKGQKTCLNLS 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,023
Number of Sequences: 336
Number of extensions: 2088
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)