Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0738.Seq
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16064-1|CAA34200.1| 172|Homo sapiens protein ( Human mRNA for ... 44 7e-04
CR457036-1|CAG33317.1| 172|Homo sapiens TPT1 protein. 44 7e-04
BC052333-1|AAH52333.1| 172|Homo sapiens tumor protein, translat... 44 7e-04
BC022436-1|AAH22436.1| 138|Homo sapiens TPT1 protein protein. 44 7e-04
BC012431-1|AAH12431.1| 172|Homo sapiens tumor protein, translat... 44 7e-04
BC003352-1|AAH03352.1| 172|Homo sapiens tumor protein, translat... 44 7e-04
AY121805-1|AAM82753.1| 412|Homo sapiens BJ-HCC-24 tumor antigen... 44 7e-04
AY117678-1|AAM51565.1| 172|Homo sapiens p02 protein protein. 44 7e-04
AL138963-4|CAH72035.1| 188|Homo sapiens tumor protein, translat... 44 7e-04
AL138963-3|CAH72034.1| 172|Homo sapiens tumor protein, translat... 44 7e-04
AL138963-2|CAH72033.1| 138|Homo sapiens tumor protein, translat... 44 7e-04
AK000037-1|BAA90897.1| 412|Homo sapiens protein ( Homo sapiens ... 44 7e-04
AJ400717-1|CAB87812.1| 172|Homo sapiens translationally control... 44 7e-04
AY334563-1|AAQ01550.1| 172|Homo sapiens TCTP protein. 42 0.002
AK098423-1|BAC05305.1| 485|Homo sapiens protein ( Homo sapiens ... 31 3.0
BC030023-1|AAH30023.1| 440|Homo sapiens glycosyltransferase 8 d... 31 5.2
AK055979-1|BAB71063.1| 710|Homo sapiens protein ( Homo sapiens ... 30 6.9
>X16064-1|CAA34200.1| 172|Homo sapiens protein ( Human mRNA for
translationally controlled tumor protein. ).
Length = 172
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -3
Query: 654 LGKSMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 541
+G++M+ DGMVA+++YR+ DG P M+FFK GLE EK
Sbjct: 136 IGENMNPDGMVALLDYRE-DGV-TPYMIFFKDGLEMEK 171
>CR457036-1|CAG33317.1| 172|Homo sapiens TPT1 protein.
Length = 172
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -3
Query: 654 LGKSMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 541
+G++M+ DGMVA+++YR+ DG P M+FFK GLE EK
Sbjct: 136 IGENMNPDGMVALLDYRE-DGV-TPYMIFFKDGLEMEK 171
>BC052333-1|AAH52333.1| 172|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 172
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -3
Query: 654 LGKSMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 541
+G++M+ DGMVA+++YR+ DG P M+FFK GLE EK
Sbjct: 136 IGENMNPDGMVALLDYRE-DGV-TPYMIFFKDGLEMEK 171
>BC022436-1|AAH22436.1| 138|Homo sapiens TPT1 protein protein.
Length = 138
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -3
Query: 654 LGKSMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 541
+G++M+ DGMVA+++YR+ DG P M+FFK GLE EK
Sbjct: 102 IGENMNPDGMVALLDYRE-DGV-TPYMIFFKDGLEMEK 137
>BC012431-1|AAH12431.1| 172|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 172
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -3
Query: 654 LGKSMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 541
+G++M+ DGMVA+++YR+ DG P M+FFK GLE EK
Sbjct: 136 IGENMNPDGMVALLDYRE-DGV-TPYMIFFKDGLEMEK 171
>BC003352-1|AAH03352.1| 172|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 172
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -3
Query: 654 LGKSMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 541
+G++M+ DGMVA+++YR+ DG P M+FFK GLE EK
Sbjct: 136 IGENMNPDGMVALLDYRE-DGV-TPYMIFFKDGLEMEK 171
>AY121805-1|AAM82753.1| 412|Homo sapiens BJ-HCC-24 tumor antigen
protein.
Length = 412
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -3
Query: 654 LGKSMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 541
+G++M+ DGMVA+++YR+ DG P M+FFK GLE EK
Sbjct: 376 IGENMNPDGMVALLDYRE-DGV-TPYMIFFKDGLEMEK 411
>AY117678-1|AAM51565.1| 172|Homo sapiens p02 protein protein.
Length = 172
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -3
Query: 654 LGKSMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 541
+G++M+ DGMVA+++YR+ DG P M+FFK GLE EK
Sbjct: 136 IGENMNPDGMVALLDYRE-DGV-TPYMIFFKDGLEMEK 171
>AL138963-4|CAH72035.1| 188|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 188
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -3
Query: 654 LGKSMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 541
+G++M+ DGMVA+++YR+ DG P M+FFK GLE EK
Sbjct: 136 IGENMNPDGMVALLDYRE-DGV-TPYMIFFKDGLEMEK 171
>AL138963-3|CAH72034.1| 172|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 172
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -3
Query: 654 LGKSMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 541
+G++M+ DGMVA+++YR+ DG P M+FFK GLE EK
Sbjct: 136 IGENMNPDGMVALLDYRE-DGV-TPYMIFFKDGLEMEK 171
>AL138963-2|CAH72033.1| 138|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 138
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -3
Query: 654 LGKSMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 541
+G++M+ DGMVA+++YR+ DG P M+FFK GLE EK
Sbjct: 102 IGENMNPDGMVALLDYRE-DGV-TPYMIFFKDGLEMEK 137
>AK000037-1|BAA90897.1| 412|Homo sapiens protein ( Homo sapiens
cDNA FLJ20030 fis, clone ADSU02156. ).
Length = 412
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -3
Query: 654 LGKSMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 541
+G++M+ DGMVA+++YR+ DG P M+FFK GLE EK
Sbjct: 376 IGENMNPDGMVALLDYRE-DGV-TPYMIFFKDGLEMEK 411
>AJ400717-1|CAB87812.1| 172|Homo sapiens translationally controlled
tumor protein (TCTP) protein.
Length = 172
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -3
Query: 654 LGKSMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 541
+G++M+ DGMVA+++YR+ DG P M+FFK GLE EK
Sbjct: 136 IGENMNPDGMVALLDYRE-DGV-TPYMIFFKDGLEMEK 171
>AY334563-1|AAQ01550.1| 172|Homo sapiens TCTP protein.
Length = 172
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = -3
Query: 654 LGKSMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 541
+G++M+ DGMVA+++YR+ DG P M+FFK GL+ EK
Sbjct: 136 IGENMNPDGMVALLDYRE-DGV-TPYMIFFKDGLKMEK 171
>AK098423-1|BAC05305.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ25557 fis, clone JTH02756. ).
Length = 485
Score = 31.5 bits (68), Expect = 3.0
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +1
Query: 28 AVAALMDTVPTVVMEVYHPPAVPVTLVQTQTAQDPVHLVVAALMDTVPTVVMKVYHPPAV 207
+V ++ T+PT++M P V VT++QT A A VP+ V P +
Sbjct: 384 SVMLILRTMPTLMMRTEDRPKVAVTMIQTAAAMGVASGAGATAAAPVPSPVAASTRPRRM 443
Query: 208 PVTL 219
V L
Sbjct: 444 AVKL 447
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +3
Query: 255 TVAALMKTVPRVVMKMYRPPAVPVTLIQTQAA 350
+V +++T+P ++M+ P V VT+IQT AA
Sbjct: 384 SVMLILRTMPTLMMRTEDRPKVAVTMIQTAAA 415
>BC030023-1|AAH30023.1| 440|Homo sapiens glycosyltransferase 8
domain containing 3 protein.
Length = 440
Score = 30.7 bits (66), Expect = 5.2
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -1
Query: 350 RCLSLNQCYWNCRWSIHFHHDSWNCLHESCYR 255
RC + CYWN W + NC E+ +R
Sbjct: 74 RCKDFSLCYWNPYWMLPSDVCGMNCFWEAAFR 105
Score = 29.9 bits (64), Expect = 9.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -3
Query: 123 RCLSLNQCYWNCRWMIHFHHDCWNCIHKCCYR 28
RC + CYWN WM+ NC + +R
Sbjct: 74 RCKDFSLCYWNPYWMLPSDVCGMNCFWEAAFR 105
>AK055979-1|BAB71063.1| 710|Homo sapiens protein ( Homo sapiens
cDNA FLJ31417 fis, clone NT2NE2000327, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 710
Score = 30.3 bits (65), Expect = 6.9
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 55 PTVVMEVYHPPAVPVTLVQTQTAQDPVHLVVAA-LMDTVPTVVMKVYHPPAVPVTLIR 225
P V PPAV T+ T+ AQ PV AA D+ + + HPP+ +++ R
Sbjct: 251 PPVTTSNAIPPAVVATVSATR-AQSPVITTTAAHATDSALRPTLSIQHPPSAAISIQR 307
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,714,194
Number of Sequences: 237096
Number of extensions: 1883984
Number of successful extensions: 3509
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3473
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -