Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0737.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    30   0.021
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.4  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.5  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   7.3  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   9.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.7  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   9.7  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   9.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   9.7  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 29.9 bits (64), Expect = 0.021
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +2

Query: 524 KKQLFRVLVLYEEQERLVNHHFIVXFVVLTEFVHYSYFCSRMSRY 658
           K Q   +++ YE Q      H  V +V +T ++ + YF  R   Y
Sbjct: 115 KLQNVSLIINYENQRTRSRIHLFVRYVFVTSYLLFDYFVQRNQEY 159


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 402 ESVFGQLRHWNRL 364
           E++F QLR W RL
Sbjct: 60  ENIFKQLREWGRL 72


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 498 YRRMETLPVKSNCFVYSSCMKNRNGL 575
           YR  + L VKS   ++S C    NGL
Sbjct: 20  YREDDVLLVKSEPQLHSPCATGSNGL 45


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -3

Query: 423 FNFLWLFESVFGQLRHWNRLR*TIASNTKFTSTSAAC 313
           FN+  +  + F + R W RL   + S  K   T   C
Sbjct: 78  FNYYVIVVTTFYKRRTWTRLLKNLESCAKIKKTKRYC 114


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 402 ESVFGQLRHWNRL 364
           E++F QLR W RL
Sbjct: 60  ENIFKQLREWGRL 72


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 355 NCFEHKIYKYQRRLLYVDGTKTK 287
           N    K+YK + R L VDG K++
Sbjct: 487 NSILRKLYKNKYRKLIVDGKKSE 509


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 656 IGSFCYRNRNSEQIR 612
           I ++C+RN NSE ++
Sbjct: 185 INTYCFRNDNSEILK 199


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 20/91 (21%), Positives = 36/91 (39%)
 Frame = +2

Query: 98  ISFKYNLYYIMTRNIIFPMILQLSSSEMNDYRHKCMCFFVINGVGHLIRLC*TLYYYYWK 277
           I + Y+ + I T +++F  +L +       Y +     F +    HL+ L    Y+YY  
Sbjct: 212 IYYFYSAFIIFTIHLLFYCVLIILLCIY--YFYYAFILFTV----HLLLLVCIYYFYYMH 265

Query: 278 LRGFCLSTINIQQAALVLVNFVFEAIVYLSL 370
           L   C   I       +L  + F   + + L
Sbjct: 266 LLFCCAFIIFTMHLLFLLCIYYFYCALIILL 296


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -2

Query: 403 RISLRAAKTLEQTEINNCFEHKIYKYQRRL 314
           R  L A+  L QT++   F+++  KY++ +
Sbjct: 151 RAELAASLGLTQTQVKIWFQNRRSKYKKMM 180


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 525 KSNCFVYSSCMKNRN 569
           K+N F+ S C KN+N
Sbjct: 20  KTNPFLASDCDKNQN 34


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 391 ED*FEKP*EIKITTSALSNKV 453
           ED  EKP  +KI+   + N+V
Sbjct: 481 EDAIEKPAPVKISVQEVLNRV 501


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 618 NSVRTTKXTMKWWLTSRSCSSYKT 547
           N+ R +  T+K WL     + Y T
Sbjct: 90  NATRESTATLKAWLNEHKKNPYPT 113


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 525 KSNCFVYSSCMKNRN 569
           K+N F+ S C KN+N
Sbjct: 20  KTNPFLASDCDKNQN 34


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 525 KSNCFVYSSCMKNRN 569
           K+N F+ S C KN+N
Sbjct: 20  KTNPFLASDCDKNQN 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,901
Number of Sequences: 336
Number of extensions: 3193
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)