Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0737.Seq
         (698 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0824 + 7601811-7602598,7603690-7605730,7605762-7605767,760...    30   1.5  
12_01_0121 - 920988-921296,921556-921620,921874-921923,922009-92...    29   2.7  
11_01_0050 - 384860-384874,384942-385325,385426-385914,386057-38...    29   2.7  
08_02_1446 + 27156449-27156790,27157961-27158042,27158698-271587...    29   3.5  
04_01_0007 + 168423-168485,168590-168697,169662-169741,170497-17...    29   3.5  
11_04_0432 + 17693438-17693612,17693782-17694125,17695210-17695524     28   6.2  

>12_01_0824 +
           7601811-7602598,7603690-7605730,7605762-7605767,
           7606142-7606291
          Length = 994

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 603 TKXTMKWWLTSRSCSSYKTSTRNNCFLREESPS 505
           TK T   W+T+ SCS  K       ++R  SPS
Sbjct: 711 TKSTTPGWMTALSCSIEKLGNLKGLYVRSNSPS 743


>12_01_0121 -
           920988-921296,921556-921620,921874-921923,922009-922106,
           923832-923867,925351-925731,925839-926324,926471-926647
          Length = 533

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 199 MHVFLCDQWSRASYQIMLNFVLLLLEIKRFL 291
           MH ++ D W+   + I L F+L L E+K FL
Sbjct: 195 MHKYIEDHWAHGDHIINLIFLLCLPEMKMFL 225


>11_01_0050 -
           384860-384874,384942-385325,385426-385914,386057-386233
          Length = 354

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 199 MHVFLCDQWSRASYQIMLNFVLLLLEIKRFL 291
           MH ++ D W+   + I L F+L L E+K FL
Sbjct: 196 MHKYIEDHWAHGDHIINLIFLLCLPEMKMFL 226


>08_02_1446 +
           27156449-27156790,27157961-27158042,27158698-27158792,
           27159421-27159492,27159572-27159651,27159728-27159827,
           27160064-27160141,27160408-27160455,27160570-27160638,
           27161035-27161175,27161262-27161516
          Length = 453

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 385 AKTLEQTEINNCFEHKIYKYQRRLLYVDGTKTKT 284
           A  +E    N CF+ K YK   ++ Y+ GT   T
Sbjct: 247 ASKIEMLFANKCFKKKFYKAAYKVAYIQGTGALT 280


>04_01_0007 +
           168423-168485,168590-168697,169662-169741,170497-170548,
           171112-171200,171756-171875,172204-172248,172352-172436
          Length = 213

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/46 (23%), Positives = 27/46 (58%)
 Frame = -1

Query: 563 VLHTRRVHETIAFYGKSLHPSIVDGDYKVL*NCSIKNTLLLNAEVV 426
           V H+  ++ T++ Y +  HP+I +   K   NC +++ +L++  ++
Sbjct: 143 VSHSGFLYHTLSMYSRECHPTIREEVGKHFANCELRSMVLVDTSML 188


>11_04_0432 + 17693438-17693612,17693782-17694125,17695210-17695524
          Length = 277

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 455 FLLNNSIVLYNPHRLSKDGDSSRKKQLFRVLVLYEEQERLVNHH 586
           F+ N  I+ +NP  +    + +  K  F    ++EE ERL NHH
Sbjct: 42  FITNVDILQHNPWDIVPAEEKTNGKYFF----IHEENERLGNHH 81


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,259,954
Number of Sequences: 37544
Number of extensions: 298063
Number of successful extensions: 529
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)