Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0733.Seq
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 92 2e-18
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 92 2e-18
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 92 2e-18
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 92 2e-18
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 92 2e-18
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 92 2e-18
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 92 2e-18
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 92 2e-18
AJ404607-1|CAB94913.2| 264|Homo sapiens hypothetical protein pr... 35 0.32
AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated pr... 33 0.98
AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated pr... 33 0.98
AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens ... 33 0.98
AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein. 33 0.98
AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens ... 31 3.0
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro... 31 3.0
AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein. 31 3.0
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 92.3 bits (219), Expect = 2e-18
Identities = 42/67 (62%), Positives = 56/67 (83%)
Frame = +1
Query: 1 YVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKL 180
YVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL
Sbjct: 3 YVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKL 62
Query: 181 SSMPVGG 201
+S+P GG
Sbjct: 63 ASVPAGG 69
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 92.3 bits (219), Expect = 2e-18
Identities = 42/67 (62%), Positives = 56/67 (83%)
Frame = +1
Query: 1 YVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKL 180
YVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL
Sbjct: 3 YVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKL 62
Query: 181 SSMPVGG 201
+S+P GG
Sbjct: 63 ASVPAGG 69
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 92.3 bits (219), Expect = 2e-18
Identities = 42/67 (62%), Positives = 56/67 (83%)
Frame = +1
Query: 1 YVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKL 180
YVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL
Sbjct: 3 YVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKL 62
Query: 181 SSMPVGG 201
+S+P GG
Sbjct: 63 ASVPAGG 69
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 92.3 bits (219), Expect = 2e-18
Identities = 42/67 (62%), Positives = 56/67 (83%)
Frame = +1
Query: 1 YVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKL 180
YVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL
Sbjct: 3 YVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKL 62
Query: 181 SSMPVGG 201
+S+P GG
Sbjct: 63 ASVPAGG 69
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 92.3 bits (219), Expect = 2e-18
Identities = 42/67 (62%), Positives = 56/67 (83%)
Frame = +1
Query: 1 YVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKL 180
YVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL
Sbjct: 3 YVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKL 62
Query: 181 SSMPVGG 201
+S+P GG
Sbjct: 63 ASVPAGG 69
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 92.3 bits (219), Expect = 2e-18
Identities = 42/67 (62%), Positives = 56/67 (83%)
Frame = +1
Query: 1 YVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKL 180
YVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL
Sbjct: 3 YVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKL 62
Query: 181 SSMPVGG 201
+S+P GG
Sbjct: 63 ASVPAGG 69
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 92.3 bits (219), Expect = 2e-18
Identities = 42/67 (62%), Positives = 56/67 (83%)
Frame = +1
Query: 1 YVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKL 180
YVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL
Sbjct: 3 YVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKL 62
Query: 181 SSMPVGG 201
+S+P GG
Sbjct: 63 ASVPAGG 69
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 92.3 bits (219), Expect = 2e-18
Identities = 42/67 (62%), Positives = 56/67 (83%)
Frame = +1
Query: 1 YVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKL 180
YVA+YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL
Sbjct: 3 YVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKL 62
Query: 181 SSMPVGG 201
+S+P GG
Sbjct: 63 ASVPAGG 69
>AJ404607-1|CAB94913.2| 264|Homo sapiens hypothetical protein
protein.
Length = 264
Score = 34.7 bits (76), Expect = 0.32
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +2
Query: 41 PRQLPLTLRRS-----SAPSVSKLTVRSLRK*SLSSTARMLNNLLRPDVRSCRQC 190
P QLPL+LRR S PS S +RSL S +S++R + RSC +C
Sbjct: 66 PAQLPLSLRRRCSRPRSRPSSSSRAIRSLWSRSRTSSSRWFTSDTSSSSRSCSRC 120
>AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 33.1 bits (72), Expect = 0.98
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -1
Query: 200 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRIFSTSAAAGVVLPPST 24
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 663 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 722
Query: 23 ASKYAA 6
+ +A+
Sbjct: 723 SHTHAS 728
>AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 33.1 bits (72), Expect = 0.98
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -1
Query: 200 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRIFSTSAAAGVVLPPST 24
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 663 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 722
Query: 23 ASKYAA 6
+ +A+
Sbjct: 723 SHTHAS 728
>AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ90403 fis, clone NT2RP2006042, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 597
Score = 33.1 bits (72), Expect = 0.98
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -1
Query: 200 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRIFSTSAAAGVVLPPST 24
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 141 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 200
Query: 23 ASKYAA 6
+ +A+
Sbjct: 201 SHTHAS 206
>AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein.
Length = 757
Score = 33.1 bits (72), Expect = 0.98
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -1
Query: 200 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRIFSTSAAAGVVLPPST 24
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 301 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 360
Query: 23 ASKYAA 6
+ +A+
Sbjct: 361 SHTHAS 366
>AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens
cDNA FLJ44709 fis, clone BRACE3019570, highly similar
to Rattus norvegicus SNAP-25-interacting protein (SNIP).
).
Length = 1012
Score = 31.5 bits (68), Expect = 3.0
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 34 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 192
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 765 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 818
>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting protein
protein.
Length = 1183
Score = 31.5 bits (68), Expect = 3.0
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 34 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 192
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 893 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 946
>AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein.
Length = 762
Score = 31.5 bits (68), Expect = 3.0
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 34 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 192
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 472 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 525
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,729,404
Number of Sequences: 237096
Number of extensions: 1549941
Number of successful extensions: 7630
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7629
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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