Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0733.Seq
(698 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein prot... 103 2e-22
AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB... 103 2e-22
AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA... 103 2e-22
X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal pr... 103 2e-22
AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p pro... 103 2e-22
AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p pro... 30 3.5
AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p pro... 30 3.5
AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB... 30 3.5
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 29 4.6
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 29 4.6
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 29 4.6
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 29 4.6
X67239-1|CAA47664.1| 1077|Drosophila melanogaster hairless protein. 29 8.0
M95192-1|AAA28607.1| 1059|Drosophila melanogaster hairless prote... 29 8.0
BT015220-1|AAT94449.1| 1077|Drosophila melanogaster RE41617p pro... 29 8.0
AE014297-3702|AAF56388.3| 977|Drosophila melanogaster CG11819-P... 29 8.0
AE014297-2832|AAN14358.1| 1059|Drosophila melanogaster CG5460-PC... 29 8.0
AE014297-2831|AAF55791.1| 1059|Drosophila melanogaster CG5460-PB... 29 8.0
AE014297-2830|AAN14357.1| 1077|Drosophila melanogaster CG5460-PD... 29 8.0
AE014297-2829|AAF55790.1| 1077|Drosophila melanogaster CG5460-PA... 29 8.0
>X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein
protein.
Length = 113
Score = 103 bits (248), Expect = 2e-22
Identities = 50/68 (73%), Positives = 57/68 (83%)
Frame = +1
Query: 1 YVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKL 180
YVAAYLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI GREKL
Sbjct: 3 YVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKL 62
Query: 181 SSMPVGGG 204
SSMPVGGG
Sbjct: 63 SSMPVGGG 70
>AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB,
isoform B protein.
Length = 113
Score = 103 bits (248), Expect = 2e-22
Identities = 50/68 (73%), Positives = 57/68 (83%)
Frame = +1
Query: 1 YVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKL 180
YVAAYLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI GREKL
Sbjct: 3 YVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKL 62
Query: 181 SSMPVGGG 204
SSMPVGGG
Sbjct: 63 SSMPVGGG 70
>AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA,
isoform A protein.
Length = 113
Score = 103 bits (248), Expect = 2e-22
Identities = 50/68 (73%), Positives = 57/68 (83%)
Frame = +1
Query: 1 YVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKL 180
YVAAYLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI GREKL
Sbjct: 3 YVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKL 62
Query: 181 SSMPVGGG 204
SSMPVGGG
Sbjct: 63 SSMPVGGG 70
>X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal
protein protein.
Length = 113
Score = 103 bits (247), Expect = 2e-22
Identities = 50/68 (73%), Positives = 56/68 (82%)
Frame = +1
Query: 1 YVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKL 180
YVAAYLLAVLGGK +PA D+EKILSSVG+E D E+L KVI EL GK ++ LI GREKL
Sbjct: 3 YVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKL 62
Query: 181 SSMPVGGG 204
SSMPVGGG
Sbjct: 63 SSMPVGGG 70
>AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p
protein.
Length = 113
Score = 103 bits (247), Expect = 2e-22
Identities = 50/68 (73%), Positives = 56/68 (82%)
Frame = +1
Query: 1 YVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKL 180
YVAAYLLAVLGGK +PA D+EKILSSVG+E D E+L KVI EL GK ++ LI GREKL
Sbjct: 3 YVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKL 62
Query: 181 SSMPVGGG 204
SSMPVGGG
Sbjct: 63 SSMPVGGG 70
>AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p
protein.
Length = 510
Score = 29.9 bits (64), Expect = 3.5
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -1
Query: 203 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 48
PPP GI++ + + + LPL+ + T + S S++ T I STSAAA
Sbjct: 412 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 460
>AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p
protein.
Length = 358
Score = 29.9 bits (64), Expect = 3.5
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -1
Query: 203 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 48
PPP GI++ + + + LPL+ + T + S S++ T I STSAAA
Sbjct: 260 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 308
>AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB
protein.
Length = 680
Score = 29.9 bits (64), Expect = 3.5
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -1
Query: 203 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 48
PPP GI++ + + + LPL+ + T + S S++ T I STSAAA
Sbjct: 582 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 630
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 29.5 bits (63), Expect = 4.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 144 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 34
I VEL D F K V D G++ + N+ S RGLA
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 29.5 bits (63), Expect = 4.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 144 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 34
I VEL D F K V D G++ + N+ S RGLA
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 29.5 bits (63), Expect = 4.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 144 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 34
I VEL D F K V D G++ + N+ S RGLA
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 29.5 bits (63), Expect = 4.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 144 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 34
I VEL D F K V D G++ + N+ S RGLA
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51
>X67239-1|CAA47664.1| 1077|Drosophila melanogaster hairless protein.
Length = 1077
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -1
Query: 203 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 24
PPP + + SR + +T+ SS F P A P I + SAA + +T
Sbjct: 105 PPP--LPANLSRTTTPTTTTTPSSSSSTASNGFLPHAKTPKSSSIMAASAAVAASVVGAT 162
Query: 23 ASK 15
ASK
Sbjct: 163 ASK 165
>M95192-1|AAA28607.1| 1059|Drosophila melanogaster hairless protein
protein.
Length = 1059
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -1
Query: 203 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 24
PPP + + SR + +T+ SS F P A P I + SAA + +T
Sbjct: 87 PPP--LPANLSRTTTPTTTTTPSSSSSTASNGFLPHAKTPKSSSIMAASAAVAASVVGAT 144
Query: 23 ASK 15
ASK
Sbjct: 145 ASK 147
>BT015220-1|AAT94449.1| 1077|Drosophila melanogaster RE41617p
protein.
Length = 1077
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -1
Query: 203 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 24
PPP + + SR + +T+ SS F P A P I + SAA + +T
Sbjct: 105 PPP--LPANLSRTTTPTTTTTPSSSSSTASNGFLPHAKTPKSSSIMAASAAVAASVVGAT 162
Query: 23 ASK 15
ASK
Sbjct: 163 ASK 165
>AE014297-3702|AAF56388.3| 977|Drosophila melanogaster CG11819-PA
protein.
Length = 977
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 61 VEKILSSVGIEADGEKLKKV-ITELNGKDVEQLIAAGREKLSSMPVGG 201
V KIL G++ + +K++ +T +GK +LI L S+PV G
Sbjct: 247 VNKILDVKGVKGLSKLMKEIAVTASSGKHDNELIGRAAITLKSIPVSG 294
>AE014297-2832|AAN14358.1| 1059|Drosophila melanogaster CG5460-PC,
isoform C protein.
Length = 1059
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -1
Query: 203 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 24
PPP + + SR + +T+ SS F P A P I + SAA + +T
Sbjct: 87 PPP--LPANLSRTTTPTTTTTPSSSSSTASNGFLPHAKTPKSSSIMAASAAVAASVVGAT 144
Query: 23 ASK 15
ASK
Sbjct: 145 ASK 147
>AE014297-2831|AAF55791.1| 1059|Drosophila melanogaster CG5460-PB,
isoform B protein.
Length = 1059
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -1
Query: 203 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 24
PPP + + SR + +T+ SS F P A P I + SAA + +T
Sbjct: 87 PPP--LPANLSRTTTPTTTTTPSSSSSTASNGFLPHAKTPKSSSIMAASAAVAASVVGAT 144
Query: 23 ASK 15
ASK
Sbjct: 145 ASK 147
>AE014297-2830|AAN14357.1| 1077|Drosophila melanogaster CG5460-PD,
isoform D protein.
Length = 1077
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -1
Query: 203 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 24
PPP + + SR + +T+ SS F P A P I + SAA + +T
Sbjct: 105 PPP--LPANLSRTTTPTTTTTPSSSSSTASNGFLPHAKTPKSSSIMAASAAVAASVVGAT 162
Query: 23 ASK 15
ASK
Sbjct: 163 ASK 165
>AE014297-2829|AAF55790.1| 1077|Drosophila melanogaster CG5460-PA,
isoform A protein.
Length = 1077
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -1
Query: 203 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 24
PPP + + SR + +T+ SS F P A P I + SAA + +T
Sbjct: 105 PPP--LPANLSRTTTPTTTTTPSSSSSTASNGFLPHAKTPKSSSIMAASAAVAASVVGAT 162
Query: 23 ASK 15
ASK
Sbjct: 163 ASK 165
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,290,250
Number of Sequences: 53049
Number of extensions: 455965
Number of successful extensions: 1378
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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