Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0732.Seq
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF289485-1|AAG17847.1| 376|Homo sapiens MYG1 homolog protein. 107 3e-23
BC051871-1|AAH51871.1| 376|Homo sapiens chromosome 12 open read... 106 7e-23
BC028904-1|AAH28904.1| 221|Homo sapiens C12orf10 protein protein. 106 7e-23
AF111805-1|AAL39007.1| 221|Homo sapiens MSTP024 protein. 106 7e-23
BC013956-1|AAH13956.2| 322|Homo sapiens C12orf10 protein protein. 89 2e-17
U51587-1|AAB81549.1| 767|Homo sapiens Golgi complex autoantigen... 30 6.9
BC032853-1|AAH32853.1| 767|Homo sapiens golgi autoantigen, golg... 30 6.9
AB208858-1|BAD92095.1| 400|Homo sapiens golgin 97 variant protein. 30 6.9
AF074331-1|AAD38423.1| 614|Homo sapiens PAPS synthetase-2 protein. 30 9.1
>AF289485-1|AAG17847.1| 376|Homo sapiens MYG1 homolog protein.
Length = 376
Score = 107 bits (258), Expect = 3e-23
Identities = 60/160 (37%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
Frame = -3
Query: 681 LL*PNEDLKLI---YKKVYESFIQGIDAIDNGIPM-TEEQPKYDIHTHLSNRVKRLEPRM 514
LL P+E+ ++ Y K+YE+F++ +DA+DNGI E +P+Y + T LS RV RL P
Sbjct: 147 LLGPSEEDSMVGTLYDKMYENFVEEVDAVDNGISQWAEGEPRYALTTTLSARVARLNPTW 206
Query: 513 ELTQETNVDEFFNKAMALVSEDFLYFTRYYINTWFPARNLVRKAIDNRFQIHKSGEIV-V 337
+ + + F +AM LV E+FL +Y ++W PAR LV +A+ RFQ+ SGEIV +
Sbjct: 207 NHPDQ-DTEAGFKRAMDLVQEEFLQRLDFYQHSWLPARALVEEALAQRFQVDPSGEIVEL 265
Query: 336 FNERFPWKYHLFDLEQELGIEPQIKYVHSMINQNLGEFKL 217
PWK HL+ LE G+ P + + G++++
Sbjct: 266 AKGACPWKEHLYHLES--GLSPPVAIFFVIYTDQAGQWRI 303
Score = 88.6 bits (210), Expect = 2e-17
Identities = 40/73 (54%), Positives = 50/73 (68%)
Frame = -2
Query: 253 FNDKPKSWRVQAVPIDPMSFVLRKALHSAWRGIRDDNLSSVSGIEGCIFCHSNGFIGGNT 74
+ D+ WR+Q VP +P SF R L WRG+RD+ L VSGI GCIF H++GFIGG+
Sbjct: 294 YTDQAGQWRIQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCIFVHASGFIGGHP 353
Query: 73 TLEGALKMAIASL 35
T EGAL MA A+L
Sbjct: 354 TREGALSMARATL 366
>BC051871-1|AAH51871.1| 376|Homo sapiens chromosome 12 open reading
frame 10 protein.
Length = 376
Score = 106 bits (255), Expect = 7e-23
Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 2/147 (1%)
Frame = -3
Query: 651 IYKKVYESFIQGIDAIDNGIPM-TEEQPKYDIHTHLSNRVKRLEPRMELTQETNVDEFFN 475
+Y K+YE+F++ +DA+DNGI E +P+Y + T LS RV RL P + + + F
Sbjct: 160 LYDKMYENFVEEVDAVDNGISQWAEGEPRYALTTTLSARVARLNPTWNHPDQ-DTEAGFK 218
Query: 474 KAMALVSEDFLYFTRYYINTWFPARNLVRKAIDNRFQIHKSGEIV-VFNERFPWKYHLFD 298
+AM LV E+FL +Y ++W PAR LV +A+ RFQ+ SGEIV + PWK HL+
Sbjct: 219 RAMDLVQEEFLQRLDFYQHSWLPARALVEEALAQRFQVDPSGEIVELAKGACPWKEHLYH 278
Query: 297 LEQELGIEPQIKYVHSMINQNLGEFKL 217
LE G+ P + + G++++
Sbjct: 279 LES--GLSPPVAIFFVIYTDQAGQWRI 303
Score = 88.6 bits (210), Expect = 2e-17
Identities = 40/73 (54%), Positives = 50/73 (68%)
Frame = -2
Query: 253 FNDKPKSWRVQAVPIDPMSFVLRKALHSAWRGIRDDNLSSVSGIEGCIFCHSNGFIGGNT 74
+ D+ WR+Q VP +P SF R L WRG+RD+ L VSGI GCIF H++GFIGG+
Sbjct: 294 YTDQAGQWRIQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCIFVHASGFIGGHR 353
Query: 73 TLEGALKMAIASL 35
T EGAL MA A+L
Sbjct: 354 TREGALSMARATL 366
>BC028904-1|AAH28904.1| 221|Homo sapiens C12orf10 protein protein.
Length = 221
Score = 106 bits (255), Expect = 7e-23
Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 2/147 (1%)
Frame = -3
Query: 651 IYKKVYESFIQGIDAIDNGIPM-TEEQPKYDIHTHLSNRVKRLEPRMELTQETNVDEFFN 475
+Y K+YE+F++ +DA+DNGI E +P+Y + T LS RV RL P + + + F
Sbjct: 5 LYDKMYENFVEEVDAVDNGISQWAEGEPRYALTTTLSARVARLNPTWNHPDQ-DTEAGFK 63
Query: 474 KAMALVSEDFLYFTRYYINTWFPARNLVRKAIDNRFQIHKSGEIV-VFNERFPWKYHLFD 298
+AM LV E+FL +Y ++W PAR LV +A+ RFQ+ SGEIV + PWK HL+
Sbjct: 64 RAMDLVQEEFLQRLDFYQHSWLPARALVEEALAQRFQVDPSGEIVELAKGACPWKEHLYH 123
Query: 297 LEQELGIEPQIKYVHSMINQNLGEFKL 217
LE G+ P + + G++++
Sbjct: 124 LES--GLSPPVAIFFVIYTDQAGQWRI 148
Score = 88.6 bits (210), Expect = 2e-17
Identities = 40/73 (54%), Positives = 50/73 (68%)
Frame = -2
Query: 253 FNDKPKSWRVQAVPIDPMSFVLRKALHSAWRGIRDDNLSSVSGIEGCIFCHSNGFIGGNT 74
+ D+ WR+Q VP +P SF R L WRG+RD+ L VSGI GCIF H++GFIGG+
Sbjct: 139 YTDQAGQWRIQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCIFVHASGFIGGHR 198
Query: 73 TLEGALKMAIASL 35
T EGAL MA A+L
Sbjct: 199 TREGALSMARATL 211
>AF111805-1|AAL39007.1| 221|Homo sapiens MSTP024 protein.
Length = 221
Score = 106 bits (255), Expect = 7e-23
Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 2/147 (1%)
Frame = -3
Query: 651 IYKKVYESFIQGIDAIDNGIPM-TEEQPKYDIHTHLSNRVKRLEPRMELTQETNVDEFFN 475
+Y K+YE+F++ +DA+DNGI E +P+Y + T LS RV RL P + + + F
Sbjct: 5 LYDKMYENFVEEVDAVDNGISQWAEGEPRYALTTTLSARVARLNPTWNHPDQ-DTEAGFK 63
Query: 474 KAMALVSEDFLYFTRYYINTWFPARNLVRKAIDNRFQIHKSGEIV-VFNERFPWKYHLFD 298
+AM LV E+FL +Y ++W PAR LV +A+ RFQ+ SGEIV + PWK HL+
Sbjct: 64 RAMDLVQEEFLQRLDFYQHSWLPARALVEEALAQRFQVDPSGEIVELAKGACPWKEHLYH 123
Query: 297 LEQELGIEPQIKYVHSMINQNLGEFKL 217
LE G+ P + + G++++
Sbjct: 124 LES--GLSPPVAIFFVIYTDQAGQWRI 148
Score = 88.6 bits (210), Expect = 2e-17
Identities = 40/73 (54%), Positives = 50/73 (68%)
Frame = -2
Query: 253 FNDKPKSWRVQAVPIDPMSFVLRKALHSAWRGIRDDNLSSVSGIEGCIFCHSNGFIGGNT 74
+ D+ WR+Q VP +P SF R L WRG+RD+ L VSGI GCIF H++GFIGG+
Sbjct: 139 YTDQAGQWRIQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCIFVHASGFIGGHR 198
Query: 73 TLEGALKMAIASL 35
T EGAL MA A+L
Sbjct: 199 TREGALSMARATL 211
>BC013956-1|AAH13956.2| 322|Homo sapiens C12orf10 protein protein.
Length = 322
Score = 88.6 bits (210), Expect = 2e-17
Identities = 40/73 (54%), Positives = 50/73 (68%)
Frame = -2
Query: 253 FNDKPKSWRVQAVPIDPMSFVLRKALHSAWRGIRDDNLSSVSGIEGCIFCHSNGFIGGNT 74
+ D+ WR+Q VP +P SF R L WRG+RD+ L VSGI GCIF H++GFIGG+
Sbjct: 240 YTDQAGQWRIQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCIFVHASGFIGGHR 299
Query: 73 TLEGALKMAIASL 35
T EGAL MA A+L
Sbjct: 300 TREGALSMARATL 312
Score = 67.3 bits (157), Expect = 5e-11
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = -3
Query: 480 FNKAMALVSEDFLYFTRYYINTWFPARNLVRKAIDNRFQIHKSGEIV-VFNERFPWKYHL 304
F +AM LV E+FL +Y ++W PAR LV +A+ RFQ+ SGEIV + PWK HL
Sbjct: 163 FKRAMDLVQEEFLQRLDFYQHSWLPARALVEEALAQRFQVDPSGEIVELAKGACPWKEHL 222
Query: 303 FDLEQELGIEPQIKYVHSMINQNLGEFKL 217
+ LE G+ P + + G++++
Sbjct: 223 YHLES--GLSPPVAIFFVIYTDQAGQWRI 249
>U51587-1|AAB81549.1| 767|Homo sapiens Golgi complex autoantigen
golgin-97 protein.
Length = 767
Score = 30.3 bits (65), Expect = 6.9
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = -3
Query: 633 ESFIQGIDAIDNGIPMTEEQPKYDIHTHLSNRVKRLEPRME--LTQETNVDEFFNKAMAL 460
++ IQ + +ID E Q K D+ THL +V LE R+E L+ E +V E +
Sbjct: 269 QALIQQL-SIDLQKVTAETQEKEDVITHLQEKVASLEKRLEQNLSGEEHVQELLKE--KT 325
Query: 459 VSEDFLYFTRYYINTWFPARNLVRKAID 376
++E L TR + AR+ KAI+
Sbjct: 326 LAEQNLEDTRQQL---LAARSSQAKAIN 350
>BC032853-1|AAH32853.1| 767|Homo sapiens golgi autoantigen, golgin
subfamily a, 1 protein.
Length = 767
Score = 30.3 bits (65), Expect = 6.9
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = -3
Query: 633 ESFIQGIDAIDNGIPMTEEQPKYDIHTHLSNRVKRLEPRME--LTQETNVDEFFNKAMAL 460
++ IQ + +ID E Q K D+ THL +V LE R+E L+ E +V E +
Sbjct: 269 QALIQQL-SIDLQKVTAETQEKEDVITHLQEKVASLEKRLEQNLSGEEHVQELLKE--KT 325
Query: 459 VSEDFLYFTRYYINTWFPARNLVRKAID 376
++E L TR + AR+ KAI+
Sbjct: 326 LAEQNLEDTRQQL---LAARSSQAKAIN 350
>AB208858-1|BAD92095.1| 400|Homo sapiens golgin 97 variant protein.
Length = 400
Score = 30.3 bits (65), Expect = 6.9
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = -3
Query: 633 ESFIQGIDAIDNGIPMTEEQPKYDIHTHLSNRVKRLEPRME--LTQETNVDEFFNKAMAL 460
++ IQ + +ID E Q K D+ THL +V LE R+E L+ E +V E +
Sbjct: 168 QALIQQL-SIDLQKVTAETQEKEDVITHLQEKVASLEKRLEQNLSGEEHVQELLKE--KT 224
Query: 459 VSEDFLYFTRYYINTWFPARNLVRKAID 376
++E L TR + AR+ KAI+
Sbjct: 225 LAEQNLEDTRQQL---LAARSSQAKAIN 249
>AF074331-1|AAD38423.1| 614|Homo sapiens PAPS synthetase-2 protein.
Length = 614
Score = 29.9 bits (64), Expect = 9.1
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -3
Query: 669 NEDLKLIYKKVYESFIQGIDAIDNGIPMTEEQPKYDIHTHLSNRVKRLEPRMELTQETNV 490
+ D+K +YKK I+G ID+ E P+ + T+LS + +EL QE N+
Sbjct: 157 SRDVKGLYKKARAGEIKGFTGIDSDYE-KPETPERVLKTNLSTVSDCVHQVVELLQEQNI 215
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,720,467
Number of Sequences: 237096
Number of extensions: 2346932
Number of successful extensions: 3766
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3757
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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