Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0730.Seq
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    25   2.3  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.3  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   3.0  

>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
 Frame = +3

Query: 42  YKTRKIKHLTIIFIYKRI--HNIFYNTSKLITYF*LQNTAQFIN-DTIHYLPT*QMLRIL 212
           Y T  + H   + +      H  + NT+ LI+Y    N AQ  N    +Y P     R+ 
Sbjct: 650 YPTETVMHEYFLLVTSNAVQHQEYLNTTALISYCDFLNRAQVNNRSAYNYYPVYSFGRLA 709

Query: 213 D 215
           D
Sbjct: 710 D 710


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
 Frame = +3

Query: 42  YKTRKIKHLTIIFIYKRI--HNIFYNTSKLITYF*LQNTAQFIN-DTIHYLPT*QMLRIL 212
           Y T  + H   + +      H  + NT+ LI+Y    N AQ  N    +Y P     R+ 
Sbjct: 650 YPTETVMHEYFLLVTSNAVQHQEYLNTTALISYCDFLNRAQVNNRSAYNYYPVYSFGRLA 709

Query: 213 D 215
           D
Sbjct: 710 D 710


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 66  LTIIFIYKRIHNIFY 110
           + +IFIYK I N+F+
Sbjct: 647 IAVIFIYKAIENVFH 661


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,328
Number of Sequences: 2352
Number of extensions: 8657
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)