Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0729.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   3.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.2  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   3.2  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   3.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   4.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.2  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   9.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   9.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   9.7  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 659 WFIICVY*LGFVTCSRSFEVCPSLY 585
           +FII +Y L  +T S +  VC + Y
Sbjct: 43  YFIIAIYVLTILTSSVTLHVCFNSY 67


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 389 FLNFTIKQVLPLCRVLFSCKFIMY 318
           F+ FT+  +  LC   F C FI++
Sbjct: 153 FIIFTVHLLFLLCIYHFFCAFIIF 176


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 18  FNYNYYLNDASSIVNN 65
           FN+NY  N A S  NN
Sbjct: 211 FNFNYQYNQAYSNYNN 226


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 18  FNYNYYLNDASSIVNN 65
           FN+NY  N A S  NN
Sbjct: 231 FNFNYQYNQAYSNYNN 246


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -1

Query: 401 RKFHFLNFTIKQVLPLCRVLFSCKFIMYLI 312
           +K  +       +L  C V+F C F + +I
Sbjct: 86  QKLRYFEEVFSSLLSCCSVIFGCIFALKVI 115


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -1

Query: 401 RKFHFLNFTIKQVLPLCRVLFSCKFIMYLI 312
           +K  +       +L  C V+F C F + +I
Sbjct: 86  QKLRYFEEVFSSLLSCCSVIFGCIFALKVI 115


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 384 QFYNKTGAASLSCFVFLQIYHVF 316
           ++Y  T + +   FV L+IYH++
Sbjct: 4   KWYYITISMAFIIFVSLEIYHIY 26


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 423 LIKNHWNPKVPFPQFYNKT 367
           L+ ++WN  +P   +YN T
Sbjct: 339 LLDDYWNEYIPPILYYNYT 357


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 423 LIKNHWNPKVPFPQFYNKT 367
           L+ ++WN  +P   +YN T
Sbjct: 339 LLDDYWNEYIPPILYYNYT 357


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,434
Number of Sequences: 336
Number of extensions: 3144
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)