Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0728.Seq
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.44 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   3.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.4  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.4  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -1

Query: 185 QIDYVCICLLVNTIFIGFLVVNEKIKMIIVKRCCD 81
           Q+  + +C  +   F   +V+  K+K I+ K+CC+
Sbjct: 209 QLYLLILCDQILREFDQIVVILSKVKSILNKKCCE 243


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -1

Query: 212 SNCLCNVCLQIDYVCICL-LVNTIFIGFLVV 123
           SN L +VC  +  +  C+ L N++F GFLV+
Sbjct: 188 SNLLKSVCADLCLLSECVDLFNSLF-GFLVL 217


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 489 TPRSPHARRSRHKTSDK 439
           TPRS   +R +  TSDK
Sbjct: 840 TPRSTPDKREKSPTSDK 856


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -1

Query: 353 FNVNMKFLPRLKVTTFCKVF 294
           FN  ++ +P+   + +C+VF
Sbjct: 266 FNTVLELMPKHACSEYCRVF 285


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 177 LCMYMPVGEHYFYWLS 130
           L +Y    +HY YW S
Sbjct: 11  LLLYYIYSKHYSYWQS 26


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 258 GARMMFWARAVGPADLE 208
           G  +  W+  VGP  LE
Sbjct: 507 GGEVCLWSEQVGPDSLE 523


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,303
Number of Sequences: 336
Number of extensions: 2328
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)