Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0728.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    25   1.2  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   1.6  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    24   3.8  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    24   3.8  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    24   3.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.8  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = -1

Query: 173 VCICLLVNTIFIGFLVVNEKIKMIIVKRCCD 81
           + + +LVN + +G LV++    +++VKR  D
Sbjct: 329 ILLRILVNFLILGLLVISAYEVILVVKRSMD 359


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = +2

Query: 395  KQPTDPCSVRLLKKCLSEVLCLERRAWGERGVSAXWXWVRRPSXKRKGGR 544
            +Q  D   +  +++   E + L+R+ + E+  +A +     P  K+KGGR
Sbjct: 854  RQAEDRRRMEEMRRKAHEEMLLKRQEYKEKTKNALFFAEPAPEAKKKGGR 903


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 265 WLWREDDVLGTSRRSGRPR 209
           + W+E DV G +   G+PR
Sbjct: 73  YTWKEIDVFGEAPTDGKPR 91


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 265 WLWREDDVLGTSRRSGRPR 209
           + W+E DV G +   G+PR
Sbjct: 73  YTWKEIDVFGEAPTDGKPR 91


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 265 WLWREDDVLGTSRRSGRPR 209
           + W+E DV G +   G+PR
Sbjct: 51  YTWKEIDVFGEAPTDGKPR 69


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 9   LLKNSYYYLIALKMNDSNMRLVRLVTAS 92
           L+K+   + + +  NDSN +++   TAS
Sbjct: 490 LIKDGSSFPLTITSNDSNEQIITFSTAS 517


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 9   LLKNSYYYLIALKMNDSNMRLVRLVTAS 92
           L+K+   + + +  NDSN +++   TAS
Sbjct: 491 LIKDGSSFPLTITSNDSNEQIITFSTAS 518


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,333
Number of Sequences: 2352
Number of extensions: 9471
Number of successful extensions: 53
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)