Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0728.Seq
         (548 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031210-1|AAH31210.1|  521|Homo sapiens male-specific lethal 3-...    29   8.1  
AF117065-1|AAD38499.1|  521|Homo sapiens male-specific lethal-3 ...    29   8.1  

>BC031210-1|AAH31210.1|  521|Homo sapiens male-specific lethal
           3-like 1 (Drosophila) protein.
          Length = 521

 Score = 29.5 bits (63), Expect = 8.1
 Identities = 13/68 (19%), Positives = 32/68 (47%)
 Frame = +3

Query: 189 TNVTETVRGRPDRRLVPKTSSSRQSQKVG*PLFLKKYFTESCYFQSRQKFHINVKCKNNL 368
           +++ E    + +  L  +     ++  +  P  LKK   + CY+ +R+K  + + C+ N+
Sbjct: 147 SDIEEKTEVKEEPELQTRREMEERTITIEIPEVLKKQLEDDCYYINRRKRLVKLPCQTNI 206

Query: 369 RKTRRTFV 392
                ++V
Sbjct: 207 ITILESYV 214


>AF117065-1|AAD38499.1|  521|Homo sapiens male-specific lethal-3
           homolog 1 protein.
          Length = 521

 Score = 29.5 bits (63), Expect = 8.1
 Identities = 13/68 (19%), Positives = 32/68 (47%)
 Frame = +3

Query: 189 TNVTETVRGRPDRRLVPKTSSSRQSQKVG*PLFLKKYFTESCYFQSRQKFHINVKCKNNL 368
           +++ E    + +  L  +     ++  +  P  LKK   + CY+ +R+K  + + C+ N+
Sbjct: 147 SDIEEKTEVKEEPELQTRREMEERTITIEIPEVLKKQLEDDCYYINRRKRLVKLPCQTNI 206

Query: 369 RKTRRTFV 392
                ++V
Sbjct: 207 ITILESYV 214


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,712,492
Number of Sequences: 237096
Number of extensions: 1275935
Number of successful extensions: 5018
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5017
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)