Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0724.Seq
         (548 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    62   2e-09
BC011765-1|AAH11765.1|  449|Homo sapiens chromosome 11 open read...    30   6.1  
AY358754-1|AAQ89114.1|  449|Homo sapiens C11orf24 protein.             30   6.1  
AF264781-1|AAG36936.1|  449|Homo sapiens DM4E3 protein.                30   6.1  
AF090928-1|AAF24043.1|  112|Homo sapiens PRO0470 protein.              29   8.1  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 28/34 (82%), Positives = 29/34 (85%)
 Frame = -3

Query: 525 RADIERSKSNVAMNAWLPQASYPCGNXSGTSC*K 424
           RADIE SKS+VAMNAW PQASYPCGN S TSC K
Sbjct: 4   RADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 37


>BC011765-1|AAH11765.1|  449|Homo sapiens chromosome 11 open reading
           frame 24 protein.
          Length = 449

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = -2

Query: 304 ALGH--LRYSLTDVPPQSN-PRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADII 134
           A GH  L  +L  VP  S  PR A  +   TR    AT+ + +SP+ T  +  +      
Sbjct: 182 ATGHPSLSTALAQVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHMPSDT 241

Query: 133 DRAPLPPNR 107
             +P+PP R
Sbjct: 242 AASPVPPMR 250


>AY358754-1|AAQ89114.1|  449|Homo sapiens C11orf24 protein.
          Length = 449

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = -2

Query: 304 ALGH--LRYSLTDVPPQSN-PRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADII 134
           A GH  L  +L  VP  S  PR A  +   TR    AT+ + +SP+ T  +  +      
Sbjct: 182 ATGHPSLSTALAQVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHMPSDT 241

Query: 133 DRAPLPPNR 107
             +P+PP R
Sbjct: 242 AASPVPPMR 250


>AF264781-1|AAG36936.1|  449|Homo sapiens DM4E3 protein.
          Length = 449

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = -2

Query: 304 ALGH--LRYSLTDVPPQSN-PRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADII 134
           A GH  L  +L  VP  S  PR A  +   TR    AT+ + +SP+ T  +  +      
Sbjct: 182 ATGHPSLSTALAQVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHMPSDT 241

Query: 133 DRAPLPPNR 107
             +P+PP R
Sbjct: 242 AASPVPPMR 250


>AF090928-1|AAF24043.1|  112|Homo sapiens PRO0470 protein.
          Length = 112

 Score = 29.5 bits (63), Expect = 8.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 513 ERSKSNVAMNAWLPQASYPC 454
           +R++SN+  N WLP  + PC
Sbjct: 5   KRTRSNINQNTWLPNRNLPC 24


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,279,005
Number of Sequences: 237096
Number of extensions: 1804910
Number of successful extensions: 3415
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3415
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)