Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0724.Seq
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121698-1|AAM52025.1| 1228|Drosophila melanogaster RE70806p pro...    29   3.1  
AF210316-1|AAF19446.1| 1235|Drosophila melanogaster hibris protein.    29   3.1  
AE013599-2004|AAF58172.3| 1228|Drosophila melanogaster CG7449-PA...    29   3.1  
AE013599-2003|AAO41390.1| 1235|Drosophila melanogaster CG7449-PB...    29   3.1  
U04809-1|AAA19430.1|  622|Drosophila melanogaster cocaine-sensit...    29   4.1  
AY071023-1|AAL48645.1|  622|Drosophila melanogaster RE10485p pro...    29   4.1  
AE013599-3863|AAF47200.1|  622|Drosophila melanogaster CG4545-PA...    29   4.1  
AE014298-1714|AAF48114.1| 1373|Drosophila melanogaster CG15737-P...    28   9.6  

>AY121698-1|AAM52025.1| 1228|Drosophila melanogaster RE70806p
           protein.
          Length = 1228

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 184 TWRKRSSPFKTPA*SGSRTLPGGDLTGAVHLSKNNAGV 297
           TW K   P  + + SG R +  G       LS+N+AGV
Sbjct: 678 TWTKDGLPISSNSLSGQRLISDGPRLNISRLSRNDAGV 715


>AF210316-1|AAF19446.1| 1235|Drosophila melanogaster hibris protein.
          Length = 1235

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 184 TWRKRSSPFKTPA*SGSRTLPGGDLTGAVHLSKNNAGV 297
           TW K   P  + + SG R +  G       LS+N+AGV
Sbjct: 678 TWTKDGLPISSNSLSGQRLISDGPRLNISRLSRNDAGV 715


>AE013599-2004|AAF58172.3| 1228|Drosophila melanogaster CG7449-PA,
           isoform A protein.
          Length = 1228

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 184 TWRKRSSPFKTPA*SGSRTLPGGDLTGAVHLSKNNAGV 297
           TW K   P  + + SG R +  G       LS+N+AGV
Sbjct: 678 TWTKDGLPISSNSLSGQRLISDGPRLNISRLSRNDAGV 715


>AE013599-2003|AAO41390.1| 1235|Drosophila melanogaster CG7449-PB,
           isoform B protein.
          Length = 1235

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 184 TWRKRSSPFKTPA*SGSRTLPGGDLTGAVHLSKNNAGV 297
           TW K   P  + + SG R +  G       LS+N+AGV
Sbjct: 678 TWTKDGLPISSNSLSGQRLISDGPRLNISRLSRNDAGV 715


>U04809-1|AAA19430.1|  622|Drosophila melanogaster cocaine-sensitive
           serotonin transporterprotein.
          Length = 622

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 157 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 53
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


>AY071023-1|AAL48645.1|  622|Drosophila melanogaster RE10485p
           protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 157 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 53
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


>AE013599-3863|AAF47200.1|  622|Drosophila melanogaster CG4545-PA
           protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 157 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 53
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


>AE014298-1714|AAF48114.1| 1373|Drosophila melanogaster CG15737-PA
           protein.
          Length = 1373

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 20/52 (38%), Positives = 22/52 (42%)
 Frame = +1

Query: 154 GVSFQACRVVTWRKRSSPFKTPA*SGSRTLPGGDLTGAVHLSKNNAGVLRPA 309
           G   QA     W   SSP   PA  GS    G     + H +  NAG LRPA
Sbjct: 775 GQGHQAPPATMWPHSSSPCY-PASYGSSCGSGTGAGTSPHNNDGNAGALRPA 825


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,910,174
Number of Sequences: 53049
Number of extensions: 525151
Number of successful extensions: 1355
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)