Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0723.Seq
         (748 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   4.3  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    24   4.3  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   5.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   7.6  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   7.6  
AF185642-1|AAF15577.1|  103|Anopheles gambiae Toll-related prote...    23   7.6  
AF185641-1|AAF15576.1|  116|Anopheles gambiae Toll protein.            23   7.6  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 581  NLTRILPKY*TLTICHSPFRLRNC 510
            N+T ILP Y  +T  +S  RL  C
Sbjct: 2992 NMTSILPSYHNITNNNSVMRLEYC 3015


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 517 ATVGRAIGAGLFAITPAGERGMC 449
           ATVG+++ +G    TP+G  G C
Sbjct: 19  ATVGQSLNSGDPCQTPSGTAGTC 41


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 375 TIHWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPTVAQP 524
           T++ P    ++ G   A P L+   + PL P  ++  RP P+ +PT+  P
Sbjct: 82  TMNMPPRPGMIPGMPGAPPLLMG-PNGPLPPP-MMGMRPPPMMVPTMGMP 129


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 416 NPGVTQLNRLAAHPPFASWRNS 481
           +PG     +L+ HPP AS R+S
Sbjct: 835 HPGAQTQPQLSQHPPGASGRSS 856


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -3

Query: 398  VKRRPVNCNTTHYRANWVPGPPSRSTVSISLISNSRPLFYTS 273
            ++R P+N     +  +W PG    S +S S+  + R +   S
Sbjct: 919  LERDPMNFKLCWHVRDWTPGEMISSQISSSVEQSRRTIIVLS 960


>AF185642-1|AAF15577.1|  103|Anopheles gambiae Toll-related protein
           protein.
          Length = 103

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -3

Query: 398 VKRRPVNCNTTHYRANWVPGPPSRSTVSISLISNSRPLFYTS 273
           ++R P+N     +  +W PG    S +S S+  + R +   S
Sbjct: 12  LERDPMNFKLCWHVRDWTPGEMISSQISSSVEQSRRTIIVLS 53


>AF185641-1|AAF15576.1|  116|Anopheles gambiae Toll protein.
          Length = 116

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -3

Query: 398 VKRRPVNCNTTHYRANWVPGPPSRSTVSISLISNSRPLFYTS 273
           ++R P+N     +  +W PG    S +S S+  + R +   S
Sbjct: 20  LERDPMNFKLCWHVRDWTPGEMISSQISSSVEQSRRTIIVLS 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,428
Number of Sequences: 2352
Number of extensions: 16014
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)