Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0723.Seq
(748 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ002672-1|CAA05675.1| 83|Homo sapiens immunoglobulin A heavy ... 34 0.47
AY003858-1|AAK11824.1| 95|Homo sapiens immunoglobulin mu heavy... 34 0.62
AY003800-1|AAK11771.1| 101|Homo sapiens immunoglobulin mu heavy... 34 0.62
U92706-1|AAB58789.1| 96|Homo sapiens rearranged immunoglobulin... 33 0.82
AM040548-1|CAJ13456.1| 124|Homo sapiens immunoglobulin heavy ch... 33 0.82
X95662-1|CAA64962.1| 145|Homo sapiens variable region of IgA pr... 33 1.1
X62129-1|CAA44060.1| 116|Homo sapiens Immunoglobulin heavy chai... 33 1.4
AY640532-1|AAT65133.1| 117|Homo sapiens immunoglobulin E variab... 33 1.4
AY553648-1|AAS64368.1| 138|Homo sapiens immunoglobulin mu heavy... 33 1.4
AJ002674-1|CAA05677.1| 85|Homo sapiens immunoglobulin A heavy ... 33 1.4
AF299104-1|AAG17916.1| 103|Homo sapiens immunoglobulin heavy ch... 33 1.4
AB066974-1|BAC02012.1| 119|Homo sapiens immunoglobulin heavy ch... 33 1.4
EF417889-1|ABN50342.1| 104|Homo sapiens immunoglobulin heavy ch... 32 1.9
EF417888-1|ABN50341.1| 104|Homo sapiens immunoglobulin heavy ch... 32 1.9
DQ100840-1|AAZ08847.1| 114|Homo sapiens immunoglobulin heavy ch... 32 1.9
X88826-1|CAA61296.1| 123|Homo sapiens immunoglobulin V(H) gene ... 32 2.5
EF175393-1|ABM53225.1| 90|Homo sapiens immunoglobulin heavy ch... 32 2.5
AM080376-1|CAL04522.1| 100|Homo sapiens immunoglobulin heavy ch... 32 2.5
DQ201638-1|ABA27097.1| 527|Homo sapiens oxidative-stress respon... 31 3.3
BC008726-1|AAH08726.1| 527|Homo sapiens oxidative-stress respon... 31 3.3
AF087893-1|AAP97192.1| 295|Homo sapiens DCHT2 protein. 31 3.3
AB029024-1|BAA83053.2| 467|Homo sapiens KIAA1101 protein protein. 31 3.3
AB017642-1|BAA75674.1| 527|Homo sapiens oxidative-stress respon... 31 3.3
L26898-1|AAA69011.1| 120|Homo sapiens immunoglobulin heavy chai... 31 4.4
AY164485-1|AAO32798.1| 1732|Homo sapiens polycystic kidney disea... 31 4.4
AM082522-1|CAL06668.1| 100|Homo sapiens immunoglobulin heavy ch... 31 4.4
AM080556-1|CAL04702.1| 101|Homo sapiens immunoglobulin heavy ch... 31 4.4
AM080140-1|CAL04286.1| 101|Homo sapiens immunoglobulin heavy ch... 31 4.4
AF032352-1|AAB87972.1| 139|Homo sapiens variable immunoglobulin... 31 4.4
AF021949-1|AAC09083.1| 125|Homo sapiens IgM heavy chain variabl... 31 4.4
AJ227740-1|CAA12718.1| 73|Homo sapiens immunoglobulin heavy ch... 31 5.8
AF521010-1|AAM77686.1| 234|Homo sapiens anti-recombinant HSP70.... 31 5.8
AF471332-1|AAQ05507.1| 121|Homo sapiens Ig heavy chain variable... 31 5.8
AM082999-1|CAL07145.1| 99|Homo sapiens immunoglobulin heavy ch... 30 7.7
AM081429-1|CAL05575.1| 101|Homo sapiens immunoglobulin heavy ch... 30 7.7
AM079239-1|CAL03385.1| 101|Homo sapiens immunoglobulin heavy ch... 30 7.7
AL596218-2|CAI16461.1| 444|Homo sapiens CD55 molecule, decay ac... 30 7.7
AL391597-1|CAH72945.1| 444|Homo sapiens CD55 molecule, decay ac... 30 7.7
>AJ002672-1|CAA05675.1| 83|Homo sapiens immunoglobulin A heavy
chain protein.
Length = 83
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 362 YRANWVPGPPSRSTVSISLISNSRPLFYTSLVKEKYPLLRKHIRYSL 222
Y NWV P + IS ISNS ++Y V+ ++ + R + + SL
Sbjct: 8 YEMNWVRQAPGKGLEWISYISNSGAVYYADSVEGRFTISRDNAKNSL 54
>AY003858-1|AAK11824.1| 95|Homo sapiens immunoglobulin mu heavy
chain variable region protein.
Length = 95
Score = 33.9 bits (74), Expect = 0.62
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 362 YRANWVPGPPSRSTVSISLISNSRPLFYTSLVKEKYPLLRKHIRYSL 222
Y NWV P + +S IS+S ++Y VK ++ + R + + SL
Sbjct: 4 YSMNWVRQAPGKGLEWVSYISSSSTIYYADSVKGRFTISRDNAKNSL 50
>AY003800-1|AAK11771.1| 101|Homo sapiens immunoglobulin mu heavy
chain variable region protein.
Length = 101
Score = 33.9 bits (74), Expect = 0.62
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 362 YRANWVPGPPSRSTVSISLISNSRPLFYTSLVKEKYPLLRKHIRYSL 222
Y NWV P + +S IS+S ++Y VK ++ + R + + SL
Sbjct: 5 YSMNWVRQAPGKGLEWVSYISSSSTIYYADSVKGRFTISRDNAKNSL 51
>U92706-1|AAB58789.1| 96|Homo sapiens rearranged immunoglobulin
heavy chain protein.
Length = 96
Score = 33.5 bits (73), Expect = 0.82
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 365 HYRANWVPGPPSRSTVSISLI-SNSRPLFYTSLVKEKYPLLRKHIRYSL 222
HY NWV P + +S I SNS ++Y VK ++ + R + + SL
Sbjct: 7 HYSMNWVRQAPGKGLEWVSSISSNSTYIYYADSVKGRFTISRDNAKNSL 55
>AM040548-1|CAJ13456.1| 124|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 124
Score = 33.5 bits (73), Expect = 0.82
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 374 NTTHYRANWVPGPPSRSTVSISLISN-SRPLFYTSLVKEKYPLLRKHIRYSL 222
N T+Y +WV P + IS ISN S ++Y VK ++ + R + + SL
Sbjct: 28 NFTNYNMSWVRQAPGKGLEWISYISNTSTSIYYADSVKGRFIISRDNAKESL 79
>X95662-1|CAA64962.1| 145|Homo sapiens variable region of IgA
protein.
Length = 145
Score = 33.1 bits (72), Expect = 1.1
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 362 YRANWVPGPPSRSTVSISLISNS-RPLFYTSLVKEKYPLLRKHIRYSL 222
Y NWV P R IS IS + +FY VK ++ L R +++ SL
Sbjct: 44 YGVNWVRQAPGRGPEWISYISGTHNTIFYAVAVKGRFTLSRDNVKNSL 91
>X62129-1|CAA44060.1| 116|Homo sapiens Immunoglobulin heavy chain
V-gene protein.
Length = 116
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 362 YRANWVPGPPSRSTVSISLISNSRPLFYTSLVKEKYPLLRKHIRYSL 222
Y NWV P + +S IS+S ++Y VK ++ + R + + SL
Sbjct: 51 YSMNWVRQAPGKGLEWVSSISSSSYIYYADSVKGRFTISRDNAKNSL 97
>AY640532-1|AAT65133.1| 117|Homo sapiens immunoglobulin E variable
region protein.
Length = 117
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 368 THYRANWVPGPPSRSTVSISLISNS-RPLFYTSLVKEKYPLLRKHIRYSL 222
+HY +W+ P R +S IS+S ++Y VK ++ + R + R SL
Sbjct: 30 SHYYMSWIRQAPGRGLEWVSYISSSASTIYYADSVKGRFTISRDNARNSL 79
>AY553648-1|AAS64368.1| 138|Homo sapiens immunoglobulin mu heavy
chain variable region protein.
Length = 138
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -3
Query: 374 NTTHYRANWVPGPPSRSTVSISLISNSRPLFYTSLVKEKYPLLRKHIRYSL 222
N + Y NWV P + +S IS+S ++Y +K ++ + R + + SL
Sbjct: 28 NFSTYSMNWVRQAPGKGLEWVSSISSSSYIYYADSMKGRFTISRDNAKNSL 78
>AJ002674-1|CAA05677.1| 85|Homo sapiens immunoglobulin A heavy
chain protein.
Length = 85
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -3
Query: 368 THYRANWVPGPPSRSTVSISLISNSRPLFYTSLVKEKYPLLRKHIRYSL 222
T Y NWV P + +S IS ++Y VK ++ + R + + SL
Sbjct: 6 TRYDMNWVRQAPGKGLEWLSYISRGNIIYYADSVKGRFTISRDNAKNSL 54
>AF299104-1|AAG17916.1| 103|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 103
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 362 YRANWVPGPPSRSTVSISLISNSRPLFYTSLVKEKYPLLRKHIRYSL 222
Y NWV P + +S IS+S ++Y VK ++ + R + + SL
Sbjct: 26 YSMNWVRQAPGKGLEWVSSISSSSYIYYADSVKGRFTISRDNAKNSL 72
>AB066974-1|BAC02012.1| 119|Homo sapiens immunoglobulin heavy chain
VHDJ region protein.
Length = 119
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 362 YRANWVPGPPSRSTVSISLISNSRPLFYTSLVKEKYPLLRKHIRYSL 222
Y NWV P + +S IS+S ++Y VK ++ + R + + SL
Sbjct: 32 YSMNWVRQAPGKGLEWVSSISSSSYIYYADSVKGRFTISRDNAKNSL 78
>EF417889-1|ABN50342.1| 104|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 104
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -3
Query: 353 NWVPGPPSRSTVSISLISNSRPLFYTSLVKEKYPLLRKHIRYSL 222
NWV P + IS IS+S ++Y VK ++ + R + + SL
Sbjct: 21 NWVRQAPGKGLEWISYISSSSTIYYADSVKGRFTISRDNAKNSL 64
>EF417888-1|ABN50341.1| 104|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 104
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -3
Query: 353 NWVPGPPSRSTVSISLISNSRPLFYTSLVKEKYPLLRKHIRYSL 222
NWV P + IS IS+S ++Y VK ++ + R + + SL
Sbjct: 21 NWVRQAPGKGLEWISYISSSSTIYYADSVKGRFTISRDNAKNSL 64
>DQ100840-1|AAZ08847.1| 114|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 114
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 362 YRANWVPGPPSRSTVSISLISNSRPLFYTSLVKEKYPLLRKHIRYSL 222
Y NWV P + +S IS+S ++Y VK ++ + R + + SL
Sbjct: 31 YNMNWVRQAPGKGLEWVSSISSSIYIYYADSVKGRFTISRDNAKNSL 77
>X88826-1|CAA61296.1| 123|Homo sapiens immunoglobulin V(H) gene
V-D-J protein.
Length = 123
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 362 YRANWVPGPPSRSTVSISLISNS-RPLFYTSLVKEKYPLLRKHIRYSL 222
Y NWV P + +S ISNS ++Y+ VK ++ + R + + SL
Sbjct: 32 YEMNWVRQAPGKGLEWVSYISNSGDTIYYSDSVKGRFSISRDNAKTSL 79
>EF175393-1|ABM53225.1| 90|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 90
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 368 THYRANWVPGPPSRSTVSISLI-SNSRPLFYTSLVKEKYPLLRKHIRYSL 222
++Y NWV P R IS I S+S ++Y VK ++ + R + + SL
Sbjct: 6 SNYSMNWVRQAPGRGLEWISYISSSSTTIYYADSVKGRFTISRDNAKNSL 55
>AM080376-1|CAL04522.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 362 YRANWVPGPPSRSTVSISLISNSRPLFYTSLVKEKYPLLRKHIRYSL 222
Y +WV PP R +S IS+ +Y + VK ++ + R + R +L
Sbjct: 35 YDMSWVRQPPGRGLEWVSTISSGDNTYYAASVKGRFTVSRDNSRNTL 81
>DQ201638-1|ABA27097.1| 527|Homo sapiens oxidative-stress
responsive 1 protein.
Length = 527
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 411 GKTLALPNLIALQHIPLSPAGVIAKRPAPIALPTVAQP 524
G L +P I+ H+P PAG IA +P ++LP A+P
Sbjct: 379 GTLLQVPEQISA-HLP-QPAGQIATQPTQVSLPPTAEP 414
>BC008726-1|AAH08726.1| 527|Homo sapiens oxidative-stress
responsive 1 protein.
Length = 527
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 411 GKTLALPNLIALQHIPLSPAGVIAKRPAPIALPTVAQP 524
G L +P I+ H+P PAG IA +P ++LP A+P
Sbjct: 379 GTLLQVPEQISA-HLP-QPAGQIATQPTQVSLPPTAEP 414
>AF087893-1|AAP97192.1| 295|Homo sapiens DCHT2 protein.
Length = 295
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 411 GKTLALPNLIALQHIPLSPAGVIAKRPAPIALPTVAQP 524
G L +P I+ H+P PAG IA +P ++LP A+P
Sbjct: 147 GTLLQVPEQISA-HLP-QPAGQIATQPTQVSLPPTAEP 182
>AB029024-1|BAA83053.2| 467|Homo sapiens KIAA1101 protein protein.
Length = 467
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 411 GKTLALPNLIALQHIPLSPAGVIAKRPAPIALPTVAQP 524
G L +P I+ H+P PAG IA +P ++LP A+P
Sbjct: 319 GTLLQVPEQISA-HLP-QPAGQIATQPTQVSLPPTAEP 354
>AB017642-1|BAA75674.1| 527|Homo sapiens oxidative-stress
responsive 1 protein.
Length = 527
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 411 GKTLALPNLIALQHIPLSPAGVIAKRPAPIALPTVAQP 524
G L +P I+ H+P PAG IA +P ++LP A+P
Sbjct: 379 GTLLQVPEQISA-HLP-QPAGQIATQPTQVSLPPTAEP 414
>L26898-1|AAA69011.1| 120|Homo sapiens immunoglobulin heavy chain
protein.
Length = 120
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 362 YRANWVPGPPSRSTVSISLI-SNSRPLFYTSLVKEKYPLLRKHIRYSL 222
Y NWV P + +SLI S+S ++Y VK ++ + R + + SL
Sbjct: 34 YSMNWVRQAPGKGLEWVSLIRSSSSHIYYADSVKGRFTISRDNAKNSL 81
>AY164485-1|AAO32798.1| 1732|Homo sapiens polycystic kidney disease
1-like 3 protein.
Length = 1732
Score = 31.1 bits (67), Expect = 4.4
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = -3
Query: 506 KGDRCGPLRYYASWRKGDVLQGD*VG*RQGFPSHDVVKRRPVNCNTTHYRANWVPGP 336
KGD+C L+YY + GD L GD R G SH + + R PGP
Sbjct: 125 KGDKC-LLKYYFICQTGDFLDGDAHYERNGNNSHLYQRHKKTKRGVAIARDKMPPGP 180
>AM082522-1|CAL06668.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 362 YRANWVPGPPSRSTVSISLISNSRPLFYTSLVKEKYPLLRKHIRYSL 222
Y NWV P + +S I+ S FY VK ++ + R + + +L
Sbjct: 35 YAMNWVRQAPGKGLEWVSTITRSNSTFYADSVKGRFSISRDNSKNTL 81
>AM080556-1|CAL04702.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 374 NTTHYRANWVPGPPSRSTVSISLIS-NSRPLFYTSLVKEKYPLLRKHIRYSL 222
N T+Y NWV P + +S IS NS + Y VK ++ + R + + +L
Sbjct: 31 NFTNYAMNWVRQAPGKGLDWVSAISGNSGNIHYADSVKGRFTISRDNSKKTL 82
>AM080140-1|CAL04286.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 374 NTTHYRANWVPGPPSRSTVSISLISNSRP-LFYTSLVKEKYPLLRKHIRYSL 222
N ++Y +WV P R +S IS+S +Y VK ++ + R H + +L
Sbjct: 31 NLSNYAMSWVRQAPGRGLEWVSAISDSGDRTYYADSVKGRFTISRDHSKNTL 82
>AF032352-1|AAB87972.1| 139|Homo sapiens variable immunoglobulin
anti-HLA heavy chain protein.
Length = 139
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -3
Query: 368 THYRANWVPGPPSRSTVSISLISNS-RPLFYTSLVKEKYPLLRKHIRYSL 222
+HY NWV P + +S IS+S R +++ +K ++ + R + + SL
Sbjct: 23 SHYTMNWVRQAPGKGLEWVSSISSSGRYIYHADSMKGRFTISRDNAKNSL 72
>AF021949-1|AAC09083.1| 125|Homo sapiens IgM heavy chain variable
region protein.
Length = 125
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -3
Query: 368 THYRANWVPGPPSRSTVSISLISN-SRPLFYTSLVKEKYPLLRKHIRYSL 222
++Y NWV P + IS ISN ++Y VK ++ + R + SL
Sbjct: 30 SNYEMNWVRQAPGKGLEWISYISNGDNTIYYADSVKGRFTISRDSAKNSL 79
>AJ227740-1|CAA12718.1| 73|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 73
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -3
Query: 362 YRANWVPGPPSRSTVSISLISNSRPLFYTSLVKEKYPLLRKHIRYSL 222
Y NWV P + +S I++ ++Y VK ++ + R + + SL
Sbjct: 8 YEMNWVRQAPGKGLEWVSYITSGSTIYYADSVKGRFIISRDNAKNSL 54
>AF521010-1|AAM77686.1| 234|Homo sapiens anti-recombinant HSP70.1
scFv antibody protein.
Length = 234
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 362 YRANWVPGPPSRSTVSISLISN-SRPLFYTSLVKEKYPLLRKHIRYSL 222
Y NW+ P + +S ISN S ++Y VK ++ + R + + SL
Sbjct: 28 YYMNWIRQAPGKGPEWVSYISNSSSTIYYADSVKGRFTISRDNAKNSL 75
>AF471332-1|AAQ05507.1| 121|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 121
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -3
Query: 368 THYRANWVPGPPSRSTVSISLISNSRPLFYTSLVKEKYPLLRKHIRYSL 222
T Y WV P + +S ISN FY VK ++ + R + + +L
Sbjct: 30 TSYSMTWVRQAPGKGLEWVSSISNGGGTFYADSVKGRFTISRDNSKNTL 78
>AM082999-1|CAL07145.1| 99|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 99
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = -3
Query: 362 YRANWVPGPPSRSTVSISLISNSRPLFYTSLVKEKYPLLRKHIRYSLPS 216
Y +WV P + +S IS+S +YT VK ++ + R + + ++ S
Sbjct: 35 YAMSWVRQAPGKGLEWVSTISDSSSTYYTDSVKGRFTISRDNSKNTVYS 83
>AM081429-1|CAL05575.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 362 YRANWVPGPPSRSTVSISLISNSRP-LFYTSLVKEKYPLLRKHIRYSL 222
Y NWV P + +S +SNS P +Y VK ++ + R + R +L
Sbjct: 35 YAMNWVRQAPGKGLEWVSGMSNSGPYTYYADSVKGRFTISRDNSRNTL 82
>AM079239-1|CAL03385.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -3
Query: 368 THYRANWVPGPPSRSTVSISLISNSRPL-FYTSLVKEKYPLLRKHIRYSL 222
T+Y +WV P + +SLI++S L FY VK ++ + R + + +L
Sbjct: 33 TNYAMSWVRQAPGKGLEWVSLINDSGGLTFYAGSVKGRFTISRDNSKNTL 82
>AL596218-2|CAI16461.1| 444|Homo sapiens CD55 molecule, decay
accelerating factor for complement (Cromer blood group)
protein.
Length = 444
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = -3
Query: 413 PSHDVVKRRPVNCNTTHYRANWVPGPPSRSTVSIS-LISNSRPLFYTSL-------VKEK 258
P+ + PV+ T H+ P S +T + L+S SRP+ + ++ +
Sbjct: 323 PNAQATRSTPVSRTTKHFHET-TPNKGSGTTSGTTRLLSGSRPVTQAGMRWCDRSSLQSR 381
Query: 257 YPLLRKHIRYSLPSP*EYRCL 195
P ++ +SLPS YRC+
Sbjct: 382 TPGFKRSFHFSLPSSWYYRCV 402
>AL391597-1|CAH72945.1| 444|Homo sapiens CD55 molecule, decay
accelerating factor for complement (Cromer blood group)
protein.
Length = 444
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = -3
Query: 413 PSHDVVKRRPVNCNTTHYRANWVPGPPSRSTVSIS-LISNSRPLFYTSL-------VKEK 258
P+ + PV+ T H+ P S +T + L+S SRP+ + ++ +
Sbjct: 323 PNAQATRSTPVSRTTKHFHET-TPNKGSGTTSGTTRLLSGSRPVTQAGMRWCDRSSLQSR 381
Query: 257 YPLLRKHIRYSLPSP*EYRCL 195
P ++ +SLPS YRC+
Sbjct: 382 TPGFKRSFHFSLPSSWYYRCV 402
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,683,223
Number of Sequences: 237096
Number of extensions: 2298352
Number of successful extensions: 9302
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 9172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9299
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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