Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0721.Seq
         (548 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    44   0.002
UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    38   0.12 
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    34   2.5  
UniRef50_UPI0000F1F069 Cluster: PREDICTED: hypothetical protein;...    32   7.6  

>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +1

Query: 67  GKCFR*CSSCDDPRISPLTSQYECPQ 144
           GKCFR C S ++ RISPLTS+Y+CPQ
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 38.3 bits (85), Expect = 0.12
 Identities = 25/46 (54%), Positives = 26/46 (56%)
 Frame = +1

Query: 409 GAPTARCTNATTSFLTATNF*YTAIGAXNYPXLVGXRLALQLFLVK 546
           G P AR  + TTSFLTA    Y AIGA       G RLALQ  LVK
Sbjct: 30  GGPPARSQDPTTSFLTAATLIY-AIGA-GITAAAGTRLALQWILVK 73


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
          Predicted protein - Nematostella vectensis
          Length = 79

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 15/19 (78%), Positives = 15/19 (78%)
 Frame = -2

Query: 58 FHQSRTKVRGSKAIRYRPS 2
          F   RTKVRGSK IRYRPS
Sbjct: 6  FRCQRTKVRGSKTIRYRPS 24


>UniRef50_UPI0000F1F069 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 389

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +3

Query: 78  SLMFVLRRSKNFTSNVAIRMPPVIPINHYLG 170
           S+M V+ RS  FT    IR+PP+  I+H+LG
Sbjct: 20  SVMGVVERSAVFTRQRDIRLPPIPGISHHLG 50


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,465,398
Number of Sequences: 1657284
Number of extensions: 9551659
Number of successful extensions: 21377
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21374
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)