Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0720.Seq
(598 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 146 3e-34
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 130 2e-29
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 117 2e-25
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 109 5e-23
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 109 6e-23
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 100 3e-20
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 92 8e-18
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 82 1e-14
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 80 4e-14
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 73 4e-12
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 71 2e-11
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 62 1e-08
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 60 5e-08
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 57 4e-07
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ... 56 8e-07
UniRef50_Q61343 Cluster: Beta-D-galactosidase fusion protein; n=... 44 0.003
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 40 0.044
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 37 0.31
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 36 0.55
UniRef50_A2U9U3 Cluster: GCN5-related N-acetyltransferase; n=1; ... 36 0.55
UniRef50_Q40538 Cluster: Nicotiana tabacum (clone 5) activating ... 36 0.55
UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.55
UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7... 34 2.9
UniRef50_Q9WY64 Cluster: Flagellar M-ring protein; n=3; Thermoto... 33 3.9
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 33 3.9
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 33 3.9
UniRef50_Q2AI91 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_UPI0000E48CF7 Cluster: PREDICTED: similar to Brms1l-pro... 32 8.9
UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.2... 32 8.9
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 146 bits (354), Expect = 3e-34
Identities = 70/81 (86%), Positives = 74/81 (91%)
Frame = -1
Query: 253 KPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTK 74
KPLRNKIAG+ THLM RLRHSQVRGISIKLQEEERERRDNYVP VSALE DIIEVD DTK
Sbjct: 44 KPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTK 103
Query: 73 DMLKMLDFNNINGLQLTQPAT 11
+MLK+LDF+NI GLQLTQP T
Sbjct: 104 EMLKLLDFHNIRGLQLTQPNT 124
Score = 46.8 bits (106), Expect = 4e-04
Identities = 26/50 (52%), Positives = 28/50 (56%)
Frame = -2
Query: 381 MGRXRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTSLLGIKL 232
MGR R TRLTLDF TNKRICEE+AIIPT L K+
Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKI 50
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 130 bits (314), Expect = 2e-29
Identities = 59/79 (74%), Positives = 71/79 (89%)
Frame = -1
Query: 253 KPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTK 74
K LRNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK
Sbjct: 44 KKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTK 103
Query: 73 DMLKMLDFNNINGLQLTQP 17
+MLK+LDF +++ LQ+TQP
Sbjct: 104 EMLKLLDFGSLSNLQVTQP 122
Score = 39.9 bits (89), Expect = 0.044
Identities = 23/50 (46%), Positives = 26/50 (52%)
Frame = -2
Query: 381 MGRXRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTSLLGIKL 232
MGR R TRL DF TNKR+CEEIAIIP+ L K+
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKI 50
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 117 bits (282), Expect = 2e-25
Identities = 51/82 (62%), Positives = 67/82 (81%)
Frame = -1
Query: 253 KPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTK 74
K LRNKI G+ HLM+R+R VRGISIKLQEEERE RDNYVPE+S L+ + +EVDPDTK
Sbjct: 44 KKLRNKIVGYVKHLMKRIRKGPVRGISIKLQEEERENRDNYVPEISVLDQETVEVDPDTK 103
Query: 73 DMLKMLDFNNINGLQLTQPATQ 8
+ML++LDF +++ LQ+T+P +
Sbjct: 104 EMLELLDFVSLSNLQVTRPTVE 125
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 109 bits (262), Expect = 5e-23
Identities = 49/79 (62%), Positives = 65/79 (82%)
Frame = -1
Query: 253 KPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTK 74
K L NKI G+ HLM+R++ VRGISIKLQE+ERER+DNYVPE+SA + + IEVDPDTK
Sbjct: 98 KKLCNKIVGYVMHLMKRIQKDPVRGISIKLQEKERERKDNYVPEISATDQETIEVDPDTK 157
Query: 73 DMLKMLDFNNINGLQLTQP 17
+M K+L+F +++ LQ+TQP
Sbjct: 158 EMRKVLNFVSLSNLQVTQP 176
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 109 bits (261), Expect = 6e-23
Identities = 51/77 (66%), Positives = 60/77 (77%)
Frame = -1
Query: 247 LRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDM 68
LRNKI + THLM+R++ VRGISIKLQEEERERRDNYVPE SAL+ +IIEVDPDTK M
Sbjct: 101 LRNKITSYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEGSALDQEIIEVDPDTKKM 160
Query: 67 LKMLDFNNINGLQLTQP 17
L + F ++ Q TQP
Sbjct: 161 LNLPGFGRLSNFQDTQP 177
Score = 36.3 bits (80), Expect = 0.55
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = -2
Query: 315 RLTLDFDTNKRICEEIAIIPTSLLGIKL 232
RL DF TNK +CEEIAIIP+ L K+
Sbjct: 78 RLGNDFHTNKHVCEEIAIIPSENLRNKI 105
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 100 bits (239), Expect = 3e-20
Identities = 47/79 (59%), Positives = 64/79 (81%)
Frame = -1
Query: 253 KPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTK 74
K L++KIAG+ THL ++++ VRGISIKLQEEER R +Y+PEVSAL+ +I EVDP TK
Sbjct: 81 KKLQSKIAGYVTHLTKQIQRGPVRGISIKLQEEER--RADYIPEVSALDQEITEVDPATK 138
Query: 73 DMLKMLDFNNINGLQLTQP 17
+MLK+LD +++ LQ+TQP
Sbjct: 139 EMLKLLDLGSLSNLQVTQP 157
Score = 32.3 bits (70), Expect = 8.9
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2
Query: 315 RLTLDFDTNKRICEEIAIIPTSLLGIKL 232
RL DF T+K +CEEI I+P+ L K+
Sbjct: 60 RLGNDFYTDKHVCEEITIVPSKKLQSKI 87
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 92.3 bits (219), Expect = 8e-18
Identities = 45/78 (57%), Positives = 58/78 (74%)
Frame = -1
Query: 253 KPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTK 74
K LRNK+AGF THLMRR++ VRGIS+KLQEEERERR ++VPE SALE + I VD +T
Sbjct: 44 KRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEEERERRMDFVPEKSALEVEEIRVDKETM 103
Query: 73 DMLKMLDFNNINGLQLTQ 20
+ML L ++ G++ Q
Sbjct: 104 EMLAALGMADLPGVERQQ 121
Score = 36.7 bits (81), Expect = 0.41
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -2
Query: 381 MGRXRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTSLLGIKL 232
MGR R +R+TLDF TNK++ EE++I+P+ L K+
Sbjct: 1 MGRVRTKTVKKTSRQVIEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKV 50
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 81.8 bits (193), Expect = 1e-14
Identities = 38/64 (59%), Positives = 51/64 (79%)
Frame = -1
Query: 253 KPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTK 74
K LRNKIAGFATHL++R++ V+GIS+K+QEEERERR +YVPE S+++ D + D D K
Sbjct: 84 KKLRNKIAGFATHLLKRIQTGSVKGISLKIQEEERERRLDYVPEKSSVDIDNLRGDQDVK 143
Query: 73 DMLK 62
ML+
Sbjct: 144 RMLE 147
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 79.8 bits (188), Expect = 4e-14
Identities = 40/79 (50%), Positives = 57/79 (72%)
Frame = -1
Query: 253 KPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTK 74
K LRN IAG+ HL +R++ V + ER +++ YVPEVSAL+ +IIEVDPDT+
Sbjct: 93 KKLRNGIAGYVAHLTKRIQQGPVA------RGGER-KKETYVPEVSALDQEIIEVDPDTQ 145
Query: 73 DMLKMLDFNNINGLQLTQP 17
+MLK+LDF +++ LQ+TQP
Sbjct: 146 EMLKLLDFGSLSNLQVTQP 164
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 73.3 bits (172), Expect = 4e-12
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = -1
Query: 226 FATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFN 47
F HLMRR++ VRGIS+KLQEEERERR ++VPE S ++ +I+VD DT DML L N
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFLKLN 125
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Frame = -1
Query: 253 KPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDI---IEVDP 83
K L+NKIAG+ TH+M+RL VRGIS+KLQEEERERR ++ P S ++ I + VD
Sbjct: 44 KKLKNKIAGYTTHIMKRLARGPVRGISLKLQEEERERRMDHAPATSDVDKVIQSGVSVDK 103
Query: 82 DTKDMLKMLD 53
T ML+ L+
Sbjct: 104 KTMQMLQRLE 113
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/74 (43%), Positives = 46/74 (62%)
Frame = -1
Query: 259 SYKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPD 80
S + L +KIAG+ THLM+ +R S + +S R R NYVPE S L+ +I EVD
Sbjct: 42 SSRELCSKIAGYVTHLMKEIRGSDSQ-VSPSSCRRRRRDRSNYVPEGSVLDQEITEVDAG 100
Query: 79 TKDMLKMLDFNNIN 38
TK+MLK+ F +++
Sbjct: 101 TKEMLKLPGFGSVS 114
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 59.7 bits (138), Expect = 5e-08
Identities = 27/64 (42%), Positives = 42/64 (65%)
Frame = -1
Query: 253 KPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTK 74
K L+N+IAG+ T L +++ + IK EEERER++N +P+ S L+ D +EVD T
Sbjct: 44 KKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEERERKENVIPKESMLDVDCVEVDDVTM 103
Query: 73 DMLK 62
+M+K
Sbjct: 104 EMIK 107
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 56.8 bits (131), Expect = 4e-07
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = -1
Query: 124 EVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 17
+VSAL+ ++IEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
uncultured bacterium|Rep: Non-ribosomal peptide
synthetase - uncultured bacterium
Length = 338
Score = 55.6 bits (128), Expect = 8e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = -1
Query: 484 YDSL*GELGTGPPLEVDGIDKLDIEF 407
YDSL GELGTGPPLEVDGIDKLDIEF
Sbjct: 278 YDSLYGELGTGPPLEVDGIDKLDIEF 303
>UniRef50_Q61343 Cluster: Beta-D-galactosidase fusion protein; n=1;
Mus musculus|Rep: Beta-D-galactosidase fusion protein -
Mus musculus (Mouse)
Length = 121
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -2
Query: 465 NWVPGPPSRSTVSISLISNS 406
+WVPGPPSRSTVSISLISNS
Sbjct: 18 SWVPGPPSRSTVSISLISNS 37
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 39.9 bits (89), Expect = 0.044
Identities = 22/36 (61%), Positives = 22/36 (61%)
Frame = +3
Query: 474 SESYYNLLAVVFNVDDWENPGVPXLIALQXXPLFAS 581
SESYY L AVV DWENPGV L L P FAS
Sbjct: 62 SESYYGL-AVVLQRRDWENPGVTQLNRLAAHPPFAS 96
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 37.1 bits (82), Expect = 0.31
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = -1
Query: 253 KPLRNKIAGFATHLMRRLRHSQVRGI--SIKLQEEERERRDNYVPEVSALEHDIIEVDPD 80
K LRNKIAG+ THL++ + + I +IK E + S E + VD +
Sbjct: 44 KSLRNKIAGYVTHLIKEFFKGKKKKIYTNIKFDINNIEINNKESEVFSNTELKLNLVDDE 103
Query: 79 TKDMLKMLDFNNIN 38
TK M+K L F N N
Sbjct: 104 TKQMIKKL-FPNKN 116
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 36.3 bits (80), Expect = 0.55
Identities = 22/42 (52%), Positives = 24/42 (57%)
Frame = +3
Query: 456 VPNSPYSESYYNLLAVVFNVDDWENPGVPXLIALQXXPLFAS 581
VP++ S S N LAVV DWENPGV L L P FAS
Sbjct: 10 VPHA-ISSSPGNSLAVVLQRRDWENPGVTQLNRLAAHPPFAS 50
>UniRef50_A2U9U3 Cluster: GCN5-related N-acetyltransferase; n=1;
Bacillus coagulans 36D1|Rep: GCN5-related
N-acetyltransferase - Bacillus coagulans 36D1
Length = 180
Score = 36.3 bits (80), Expect = 0.55
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 459 VPGPPSRSTVSISLISNSR 403
VPGPPSRSTVSISL+ NS+
Sbjct: 2 VPGPPSRSTVSISLMFNSK 20
>UniRef50_Q40538 Cluster: Nicotiana tabacum (clone 5) activating
factor DNA sequence; n=2; Eukaryota|Rep: Nicotiana
tabacum (clone 5) activating factor DNA sequence -
Nicotiana tabacum (Common tobacco)
Length = 56
Score = 36.3 bits (80), Expect = 0.55
Identities = 22/32 (68%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = -1
Query: 505 TTASKL*YDSL*G-ELGTGPPLEVDGIDKLDI 413
T +SKL SL G + GTGPPLEV GIDKLDI
Sbjct: 8 TPSSKL--TSLKGTKAGTGPPLEVRGIDKLDI 37
>UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 606
Score = 36.3 bits (80), Expect = 0.55
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -1
Query: 184 RGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQ 8
R I L +ER + + ++ ++ I++ P T ML FNNI+G QP TQ
Sbjct: 112 RQFQIHLARQERIKESQTLYHINRFDNSIVQKPPRTSYMLSPHTFNNISGNTKHQPPTQ 170
>UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7;
Trichocomaceae|Rep: C6 finger domain protein, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 1148
Score = 33.9 bits (74), Expect = 2.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 498 PVNCNTTHYRANWVPGPPSRSTVS 427
PV N +R W+PGPP+RS +S
Sbjct: 619 PVTDNPPDFRKEWIPGPPTRSVLS 642
>UniRef50_Q9WY64 Cluster: Flagellar M-ring protein; n=3;
Thermotogaceae|Rep: Flagellar M-ring protein -
Thermotoga maritima
Length = 532
Score = 33.5 bits (73), Expect = 3.9
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -1
Query: 235 IAGFATHLMRRLRHSQVRGISIKLQEEERERR-DNYVPEVSALEHDIIEVDPDTKDMLKM 59
+ GF T ++ L Q+R I + EER R+ + V E+ E EV P+ K++L++
Sbjct: 446 LLGFLTFMLIYLMIVQIRRIRARKLAEERRRKLEEEVKEILQEELKEEEVSPEEKELLEL 505
Query: 58 LD 53
L+
Sbjct: 506 LE 507
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 33.5 bits (73), Expect = 3.9
Identities = 17/29 (58%), Positives = 17/29 (58%)
Frame = +3
Query: 495 LAVVFNVDDWENPGVPXLIALQXXPLFAS 581
LAVV DWENPGV L L P FAS
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPFAS 54
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 33.5 bits (73), Expect = 3.9
Identities = 17/29 (58%), Positives = 17/29 (58%)
Frame = +3
Query: 495 LAVVFNVDDWENPGVPXLIALQXXPLFAS 581
LAVV DWENPGV L L P FAS
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPFAS 36
>UniRef50_Q2AI91 Cluster: Putative uncharacterized protein; n=1;
Halothermothrix orenii H 168|Rep: Putative
uncharacterized protein - Halothermothrix orenii H 168
Length = 219
Score = 33.1 bits (72), Expect = 5.1
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 239 IPKRLVGMIAISSHILLFVSKSSVNLV*YFSIIIFXAFLTVLVRXRPMA 385
I KRLV +I I+LF+ +NLV F+ I+ ++ + VR +A
Sbjct: 22 IDKRLVNTFSIILPIVLFIILKKLNLVLSFNAILLYLYVNIFVRVNTLA 70
>UniRef50_UPI0000E48CF7 Cluster: PREDICTED: similar to Brms1l-prov
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Brms1l-prov protein -
Strongylocentrotus purpuratus
Length = 318
Score = 32.3 bits (70), Expect = 8.9
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = -1
Query: 271 NRYHSYKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIE 92
N H ++ + A+ ++R LR +R KLQ EE+ R+N+ E S L D+++
Sbjct: 102 NPLHDLDQMKGRKLRIAS-VLRELRMENIRN---KLQSEEKASRENHESEKSLL-RDLMK 156
Query: 91 VDPDTKDMLKMLDFNNIN 38
D D K D +NI+
Sbjct: 157 ADLDEKIRRLEEDRHNID 174
>UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.25;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein F4F7.25 - Arabidopsis thaliana (Mouse-ear cress)
Length = 790
Score = 32.3 bits (70), Expect = 8.9
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 220 THLMRRLRHSQVRGISIKLQEEERE-RRDNYVPEVSALEHDIIEVDPDTKDML 65
T L+ H + + I LQ+ +E RR YVP+ S + HD +E D +DML
Sbjct: 668 TFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHD-VESDGHKEDML 719
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,986,690
Number of Sequences: 1657284
Number of extensions: 9374271
Number of successful extensions: 24042
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 23436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24029
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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