Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0720.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   142   1e-35
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   2.5  
AF185642-1|AAF15577.1|  103|Anopheles gambiae Toll-related prote...    25   2.5  
AF185641-1|AAF15576.1|  116|Anopheles gambiae Toll protein.            25   2.5  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     24   3.2  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   3.2  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    24   4.3  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   4.3  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   5.7  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  142 bits (343), Expect = 1e-35
 Identities = 69/83 (83%), Positives = 74/83 (89%)
 Frame = -1

Query: 253 KPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTK 74
           KPLRNKIAGF THLM+RLRHSQVRGISIKLQEEERERRDNYVP+VSALE DIIEVDP+TK
Sbjct: 44  KPLRNKIAGFVTHLMKRLRHSQVRGISIKLQEEERERRDNYVPDVSALEQDIIEVDPETK 103

Query: 73  DMLKMLDFNNINGLQLTQPATQG 5
           +MLK LDFNNI  +QLT P   G
Sbjct: 104 EMLKHLDFNNI-VVQLTNPTAPG 125



 Score = 44.8 bits (101), Expect = 2e-06
 Identities = 25/50 (50%), Positives = 28/50 (56%)
 Frame = -2

Query: 381 MGRXRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTSLLGIKL 232
           MGR R                TRLT+DFDTNKRI EE+AIIPT  L  K+
Sbjct: 1   MGRVRTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKI 50


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = -2

Query: 507  KRRPVNCNTTHYRANWVPGPPSRSTVSISLISNSRPLVQLQA 382
            +R P+N     +  +W PG    S +S S+  + R ++ L +
Sbjct: 920  ERDPMNFKLCWHVRDWTPGEMISSQISSSVEQSRRTIIVLSS 961


>AF185642-1|AAF15577.1|  103|Anopheles gambiae Toll-related protein
           protein.
          Length = 103

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = -2

Query: 507 KRRPVNCNTTHYRANWVPGPPSRSTVSISLISNSRPLVQLQA 382
           +R P+N     +  +W PG    S +S S+  + R ++ L +
Sbjct: 13  ERDPMNFKLCWHVRDWTPGEMISSQISSSVEQSRRTIIVLSS 54


>AF185641-1|AAF15576.1|  116|Anopheles gambiae Toll protein.
          Length = 116

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = -2

Query: 507 KRRPVNCNTTHYRANWVPGPPSRSTVSISLISNSRPLVQLQA 382
           +R P+N     +  +W PG    S +S S+  + R ++ L +
Sbjct: 21  ERDPMNFKLCWHVRDWTPGEMISSQISSSVEQSRRTIIVLSS 62


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = -1

Query: 181 GISIKLQEEERERRDNYVPEVSALE-HDIIEVDPDTKDMLKMLDFNN 44
           G + +L+EEE + +  + PE+   E  + ++V  + K+M+ + D +N
Sbjct: 87  GTTCELEEEEVDLQAKHAPEMDGSELMEAVDVAAELKNMV-LQDISN 132


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -2

Query: 204 VSDTRKCEESLSNFRKRSVRGVTTMSQKCLLSNMTS 97
           +++TR C E++S F+    R   T+ +K  + + TS
Sbjct: 356 INETRVCGENISTFQLEERRRRRTVIEKLNIEDGTS 391


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 462 NSPYSESYYNLLAVVFNVDDWENPG 536
           N P S+SY  + A+ F   +++NPG
Sbjct: 450 NLPVSKSYQLMKALSFFSSNYKNPG 474


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 462 NSPYSESYYNLLAVVFNVDDWENPG 536
           N P S+SY  + A+ F   +++NPG
Sbjct: 458 NLPVSKSYQLMKALSFFSSNYKNPG 482


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 103 DIIEVDPDTKDMLKMLDFNNINGL 32
           DI +VDPD    L  +  NNI G+
Sbjct: 636 DIEDVDPDLHRSLTWILENNITGI 659


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,291
Number of Sequences: 2352
Number of extensions: 9459
Number of successful extensions: 27
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)