Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0719.Seq
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    51   6e-09
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    51   6e-09
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    46   1e-07
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.1  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    20   9.4  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 50.8 bits (116), Expect = 6e-09
 Identities = 24/28 (85%), Positives = 24/28 (85%)
 Frame = +3

Query: 297 INEPTAXAIAYGLDKKGTGERNVLIFDL 380
           INEPTA AIAYGLDKK   ERNVLIFDL
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDL 28



 Score = 26.6 bits (56), Expect = 0.11
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +1

Query: 385 GXTXDVYXLTIEDGIX*VKST 447
           G T DV  LTIE+GI  VK+T
Sbjct: 30  GGTFDVSLLTIEEGIFEVKAT 50


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 50.8 bits (116), Expect = 6e-09
 Identities = 24/28 (85%), Positives = 24/28 (85%)
 Frame = +3

Query: 297 INEPTAXAIAYGLDKKGTGERNVLIFDL 380
           INEPTA AIAYGLDKK   ERNVLIFDL
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDL 28



 Score = 26.6 bits (56), Expect = 0.11
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +1

Query: 385 GXTXDVYXLTIEDGIX*VKST 447
           G T DV  LTIE+GI  VK+T
Sbjct: 30  GGTFDVSLLTIEEGIFEVKAT 50


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 46.4 bits (105), Expect = 1e-07
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = +3

Query: 297 INEPTAXAIAYGLDKKGTGERNVLIFDL 380
           INEPTA AIAYGLDKKG  E+N+L++DL
Sbjct: 1   INEPTAAAIAYGLDKKG-AEQNILVYDL 27


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 443 DFTYXIPSSMVXMYTSXVXPAXVKDKYIS 357
           DF      + + ++TS +  A V +KY+S
Sbjct: 424 DFVARNSDTPIILWTSHLTQADVIEKYLS 452


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 255 KDAGTISGLNVLRIINEP 308
           KDAG +S   +  ++N+P
Sbjct: 331 KDAGLLSYPEICTLLNDP 348


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,684
Number of Sequences: 336
Number of extensions: 1385
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)