Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0719.Seq
(449 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 139 2e-34
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 132 3e-32
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 107 6e-25
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 105 3e-24
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 81 6e-17
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 38 0.001
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 37 0.002
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 29 0.25
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.25
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 25 7.1
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 139 bits (336), Expect = 2e-34
Identities = 78/150 (52%), Positives = 91/150 (60%), Gaps = 1/150 (0%)
Frame = +1
Query: 1 IXRKFEDATVQADMKHWPFXVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMXETAEA 180
I RKF+D VQ+DMKHWPF V+S GKP ++V YKGE KTF PEE+SSMVL KM ETAEA
Sbjct: 72 IGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEA 131
Query: 181 YXGKTVQNAXITVPAYFNDSQRQATKMQVPSLA*TFFESSMNXXXXXXXXXXXXXXXENE 360
Y G V +A +TVPAYFNDSQRQATK +A +N + E
Sbjct: 132 YLGGKVTDAVVTVPAYFNDSQRQATK-DAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGE 190
Query: 361 M-YLSLTXAGXTXDVYXLTIEDGIX*VKST 447
L G T DV LTIE+GI VK+T
Sbjct: 191 SNVLIFDLGGGTFDVSLLTIEEGIFEVKAT 220
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 132 bits (318), Expect = 3e-32
Identities = 74/150 (49%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = +1
Query: 1 IXRKFEDATVQADMKHWPFXVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMXETAEA 180
I R+F D VQ+DMKHWPF V+ GKP I+V +KGE KTF PEE+SSMVL KM E+AEA
Sbjct: 72 IGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAEA 131
Query: 181 YXGKTVQNAXITVPAYFNDSQRQATKMQVPSLA*TFFESSMNXXXXXXXXXXXXXXXENE 360
+ G V +A +TVPAYFNDSQRQATK +A +N ++E
Sbjct: 132 FLGGKVTDAVVTVPAYFNDSQRQATK-DAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHE 190
Query: 361 M-YLSLTXAGXTXDVYXLTIEDGIX*VKST 447
L G T DV LTIE+GI VK+T
Sbjct: 191 TNVLIFDLGGGTFDVSLLTIEEGIFEVKAT 220
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 107 bits (258), Expect = 6e-25
Identities = 58/149 (38%), Positives = 87/149 (58%)
Frame = +1
Query: 1 IXRKFEDATVQADMKHWPFXVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMXETAEA 180
I RKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M+L+KM +TAEA
Sbjct: 105 IGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEA 164
Query: 181 YXGKTVQNAXITVPAYFNDSQRQATKMQVPSLA*TFFESSMNXXXXXXXXXXXXXXXENE 360
Y GK V +A +TVPAYFND+QRQATK ++A +N +
Sbjct: 165 YLGKPVTHAVVTVPAYFNDAQRQATK-DAGTIAGLNVIRIVNEPTAAAIAYGLDKTDTEK 223
Query: 361 MYLSLTXAGXTXDVYXLTIEDGIX*VKST 447
+ G T DV L+I++G+ V +T
Sbjct: 224 HIVVYDLGGGTFDVSLLSIDNGVFEVLAT 252
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 105 bits (252), Expect = 3e-24
Identities = 49/86 (56%), Positives = 61/86 (70%)
Frame = +1
Query: 1 IXRKFEDATVQADMKHWPFXVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMXETAEA 180
I R++ED Q D+KHWPF V+ + G P I+V Y GE K F +E+S+MVLTKM E +EA
Sbjct: 76 IGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLTKMKEISEA 135
Query: 181 YXGKTVQNAXITVPAYFNDSQRQATK 258
K V+ A ITVPAYF+DSQR ATK
Sbjct: 136 KLNKRVEKAVITVPAYFSDSQRAATK 161
Score = 68.9 bits (161), Expect = 3e-13
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = +3
Query: 243 KTSHKDAGTISGLNVLRIINEPTAXAIAYGLDKKGTGERNVLIFDL 380
+ + KDAG I+GLNVLRIINEPTA AIAYGLD K +NVLIFDL
Sbjct: 157 RAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDL 202
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 81.4 bits (192), Expect = 6e-17
Identities = 39/86 (45%), Positives = 53/86 (61%)
Frame = +1
Query: 1 IXRKFEDATVQADMKHWPFXVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMXETAEA 180
I R+F++ VQ D+K P+ +V + KT+ P ++ +L+KM ETA
Sbjct: 121 IGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGFILSKMRETAST 177
Query: 181 YXGKTVQNAXITVPAYFNDSQRQATK 258
Y GK V+NA +TVPAYFNDSQRQATK
Sbjct: 178 YLGKDVKNAVVTVPAYFNDSQRQATK 203
Score = 56.0 bits (129), Expect = 3e-09
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +3
Query: 255 KDAGTISGLNVLRIINEPTAXAIAYGLDKKGTGERNVLIFDL 380
K AG I+GLNVLR++NEPTA A+AYGLDKK + V +FDL
Sbjct: 203 KAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDL 242
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 37.5 bits (83), Expect = 0.001
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 109 EDKTFFPEEVSSMVLTKMXETAEAYXGKTVQNAXITVPAYFNDSQRQA 252
++K E S L ++ E+AE + G V ++VP YF D+QR+A
Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKA 181
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 36.7 bits (81), Expect = 0.002
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 91 KVAYKGEDKTFFPEEVSSMVLTKMXETAEAYXGKTVQNAXITVPAYFNDSQRQA 252
KV Y E+ F ++ + TK+ AEA +V + I++PA+F D QR+A
Sbjct: 106 KVQYLNEETAFSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRA 159
Score = 32.7 bits (71), Expect = 0.027
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 258 DAGTISGLNVLRIINEPTAXAIAYGLDK 341
+A I+GLN LR++N+ A A+ YG+ K
Sbjct: 162 EAANIAGLNPLRLMNDNAAAALTYGITK 189
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 29.5 bits (63), Expect = 0.25
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 109 EDKTFFPEEVSSMVLTKMXETAEAYXGKTVQNAXITVPAYFNDSQR 246
+++ + EE+ +M + AE + + + +TVP +FN+ QR
Sbjct: 131 DEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQR 176
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.5 bits (63), Expect = 0.25
Identities = 30/137 (21%), Positives = 56/137 (40%)
Frame = -1
Query: 422 SSMVXMYTSXVXPAXVKDKYISFSSTLFVKTVSNRXSSRFIDDSKNVQARDGTCIFVACL 243
SS + +S + + + + S SS L T S +S I S + F +
Sbjct: 554 SSSITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSST------SSTFSSAS 607
Query: 242 *ESLKYAGTVIXAFCTVLPX*ASAVSFILVSTMELTSSGKKVLSSPLYATLILGLPPSLT 63
S + I + T+L + S +++S+ + S +LSS + + + SL+
Sbjct: 608 TSSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSIST---IPISSSLS 664
Query: 62 TXKGQCFMSACTVASSN 12
T S+ T+ SS+
Sbjct: 665 TYSSSVIPSSSTLVSSS 681
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 24.6 bits (51), Expect = 7.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 78 ASITDNLERPVLHVGLHSS 22
A + NL RP+ H LHSS
Sbjct: 408 APVIRNLPRPIYHQDLHSS 426
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,528,983
Number of Sequences: 5004
Number of extensions: 23973
Number of successful extensions: 70
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 166231220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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