Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0719.Seq
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...    73   6e-15

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score = 72.5 bits (170), Expect = 6e-15
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = +3

Query: 255 KDAGTISGLNVLRIINEPTAXAIAYGLDKKGTGERNVLIFDL 380
           KDAG I+GLNV+RIINEPTA A+AYGLDK   GERNVLIFDL
Sbjct: 19  KDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFDL 60



 Score = 40.3 bits (90), Expect = 3e-05
 Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +1

Query: 202 NAXITVPAYFNDSQRQATKMQVPSLA*TFFESSMNXXXXXXXXXXXXXXXENEM-YLSLT 378
           +A ITVPAYFNDSQRQATK    ++A       +N               + E   L   
Sbjct: 1   DAVITVPAYFNDSQRQATK-DAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFD 59

Query: 379 XAGXTXDVYXLTIEDG 426
             G T DV  LTI++G
Sbjct: 60  LGGGTFDVSILTIDEG 75


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,188
Number of Sequences: 2352
Number of extensions: 6005
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)